RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 RECQLP46063 649 aaPredicted RBP11.87□□□□□ -0.51
CACNA1C-228ENST00000492150 PFN3P60673 137 aa11.87□□□□□ -0.51
CACNA1C-228ENST00000492150 C1orf61Q13536 156 aa11.87□□□□□ -0.51
CACNA1C-228ENST00000492150 STIM1Q13586 685 aa11.87□□□□□ -0.51
CACNA1C-228ENST00000492150 GJB7Q6PEY0 223 aa11.87□□□□□ -0.51
CACNA1C-228ENST00000492150 C11orf57Q6ZUT1 292 aaPredicted RBP11.87□□□□□ -0.51
CACNA1C-228ENST00000492150 SLC26A9Q7LBE3 791 aa11.87□□□□□ -0.51
CACNA1C-228ENST00000492150 TFAP2DQ7Z6R9 452 aa11.87□□□□□ -0.51
CACNA1C-228ENST00000492150 PASD1Q8IV76 773 aa11.87□□□□□ -0.51
CACNA1C-228ENST00000492150 PDCD6IPQ8WUM4 868 aaKnown RBP11.87□□□□□ -0.51
CACNA1C-228ENST00000492150 VOPP1Q96AW1 172 aa11.87□□□□□ -0.51
CACNA1C-228ENST00000492150 LURAP1Q96LR2 239 aa11.87□□□□□ -0.51
CACNA1C-228ENST00000492150 C5orf34Q96MH7 638 aa11.87□□□□□ -0.51
CACNA1C-228ENST00000492150 NPY6RQ99463 290 aa11.87□□□□□ -0.51
CACNA1C-228ENST00000492150 HEPHQ9BQS7 1158 aa11.87□□□□□ -0.51
CACNA1C-228ENST00000492150 CLPBQ9H078 707 aa11.87□□□□□ -0.51
CACNA1C-228ENST00000492150 SPASTQ9UBP0 616 aa11.87□□□□□ -0.51
CACNA1C-228ENST00000492150 ZNF212Q9UDV6 495 aa11.87□□□□□ -0.51
CACNA1C-228ENST00000492150 GGT7Q9UJ14 662 aa11.87□□□□□ -0.51
CACNA1C-228ENST00000492150 SLC5A6Q9Y289 635 aa11.87□□□□□ -0.51
CACNA1C-228ENST00000492150 IGLV3-10A0A075B6K4 115 aa11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 ILVBLA1L0T0 632 aa11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 PPP1R3GB7ZBB8 358 aa11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 LMO7DNF2Z398 122 aa11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 CD160O95971 181 aa11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 ETV5P41161 510 aa11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 ABL2P42684 1182 aa11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 SERPINH1P50454 418 aaKnown RBP11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 CCNHP51946 323 aaPredicted RBP11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 ADKP55263 362 aaKnown RBP11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 MARSP56192 900 aaKnown RBP11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 SLC6A3Q01959 620 aa11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 CDC20Q12834 499 aa11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 SGCGQ13326 291 aa11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 CRTC2Q53ET0 693 aaPredicted RBP11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 CARD16Q5EG05 197 aa11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 PRRT3Q5FWE3 981 aa11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 BRMS1LQ5PSV4 323 aa11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 TMEM164Q5U3C3 297 aa11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 KLHL10Q6JEL2 608 aa11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 FOXR2Q6PJQ5 311 aa11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 ZSCAN30Q86W11 494 aa11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 CCDC13Q8IYE1 715 aa11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 PCDH20Q8N6Y1 951 aaKnown RBP11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 C1orf131Q8NDD1 294 aaKnown RBP11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 ZNF397Q8NF99 534 aaPredicted RBP11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 BTN2A2Q8WVV5 523 aa11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 ASB12Q8WXK4 309 aa11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 NT5C3BQ969T7 300 aa11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 GFM1Q96RP9 751 aaKnown RBP11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 CMKLR1Q99788 373 aa11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 SPON2Q9BUD6 331 aa11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 LRRC61Q9BV99 259 aa11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 FOXP3Q9BZS1 431 aa11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 CEP44Q9C0F1 390 aa11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 WDCPQ9H6R7 721 aa11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 APOBEC3BQ9UH17 382 aaKnown RBP11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 MAN1B1Q9UKM7 699 aa11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 PCDHGC3Q9UN70 934 aa11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 ACTL7AQ9Y615 435 aa11.86□□□□□ -0.51
CACNA1C-228ENST00000492150 C16orf96A6NNT2 1141 aa11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 YY2O15391 372 aa11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 TSPAN6O43657 245 aa11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 NR1D1P20393 614 aa11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 BMP6P22004 513 aa11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 OR1E1P30953 314 aa11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 USP8P40818 1118 aa11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 LEPRP48357 1165 aaKnown RBP11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 DNA2P51530 1060 aa11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 ARF5P84085 180 aa11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 APBA1Q02410 837 aa11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 ZFP36L1Q07352 338 aaKnown RBP11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 SLC20A2Q08357 652 aa11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 ARHGAP44Q17R89 818 aa11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 PTPN20Q4JDL3 420 aa11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 RETSATQ6NUM9 610 aa11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 LRRC31Q6UY01 552 aa11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 ASB18Q6ZVZ8 466 aa11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 ENOSF1Q7L5Y1 443 aa11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 TMPRSS9Q7Z410 1059 aa11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 PHACTR4Q8IZ21 702 aa11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 IL22RA1Q8N6P7 574 aa11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 DENND6BQ8NEG7 585 aa11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 PRR7Q8TB68 274 aa11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 NELFBQ8WX92 580 aa11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 CENPTQ96BT3 561 aa11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 PGAP3Q96FM1 320 aaPredicted RBP11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 C1orf74Q96LT6 269 aa11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 TBATAQ96M53 351 aa11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 REPIN1Q9BWE0 567 aaKnown RBP11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 SLC29A3Q9BZD2 475 aa11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 ZDHHC6Q9H6R6 413 aa11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 SYNDIG1Q9H7V2 258 aa11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 RRN3Q9NYV6 651 aa11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 RABGEF1Q9UJ41 708 aa11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 ITGB1BP2Q9UKP3 347 aa11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 PADI4Q9UM07 663 aa11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 ITM2BQ9Y287 266 aa11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 FCF1Q9Y324 198 aaKnown RBP11.85□□□□□ -0.51
CACNA1C-228ENST00000492150 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms