RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 TP53INP2Q8IXH6 220 aa27.37■■□□□ 1.97
SH3GL3-204ENST00000492099 SLC25A45Q8N413 288 aa27.37■■□□□ 1.97
SH3GL3-204ENST00000492099 PSKH2Q96QS6 385 aa27.37■■□□□ 1.97
SH3GL3-204ENST00000492099 PIAS2O75928 621 aa27.36■■□□□ 1.97
SH3GL3-204ENST00000492099 ITIH2P19823 946 aa27.36■■□□□ 1.97
SH3GL3-204ENST00000492099 CDH6P55285 790 aa27.36■■□□□ 1.97
SH3GL3-204ENST00000492099 PFN3P60673 137 aa27.36■■□□□ 1.97
SH3GL3-204ENST00000492099 HNRNPKP61978 463 aaKnown RBP eCLIP27.36■■□□□ 1.97
SH3GL3-204ENST00000492099 BCL2L1Q07817 233 aa27.36■■□□□ 1.97
SH3GL3-204ENST00000492099 FZD2Q14332 565 aa27.36■■□□□ 1.97
SH3GL3-204ENST00000492099 PARGQ86W56 976 aa27.36■■□□□ 1.97
SH3GL3-204ENST00000492099 TSC1Q92574 1164 aa27.36■■□□□ 1.97
SH3GL3-204ENST00000492099 PCDH12Q9NPG4 1184 aa27.36■■□□□ 1.97
SH3GL3-204ENST00000492099 ABHD10Q9NUJ1 306 aa27.36■■□□□ 1.97
SH3GL3-204ENST00000492099 DNAJC28Q9NX36 388 aa27.36■■□□□ 1.97
SH3GL3-204ENST00000492099 CACNA1BQ00975 2339 aa27.36■■□□□ 1.97
SH3GL3-204ENST00000492099 TOR1BO14657 336 aa27.35■■□□□ 1.97
SH3GL3-204ENST00000492099 AKR1B10O60218 316 aa27.35■■□□□ 1.97
SH3GL3-204ENST00000492099 RFPL3O75679 317 aa27.35■■□□□ 1.97
SH3GL3-204ENST00000492099 PROSCO94903 275 aa27.35■■□□□ 1.97
SH3GL3-204ENST00000492099 CKMT2P17540 419 aa27.35■■□□□ 1.97
SH3GL3-204ENST00000492099 SCNN1BP51168 640 aa27.35■■□□□ 1.97
SH3GL3-204ENST00000492099 AP1S1P61966 158 aa27.35■■□□□ 1.97
SH3GL3-204ENST00000492099 DNAJC3Q13217 504 aa27.35■■□□□ 1.97
SH3GL3-204ENST00000492099 ZNF211Q13398 564 aaPredicted RBP27.35■■□□□ 1.97
SH3GL3-204ENST00000492099 PDE1CQ14123 709 aaPredicted RBP27.35■■□□□ 1.97
SH3GL3-204ENST00000492099 SMAD1Q15797 465 aaKnown RBP27.35■■□□□ 1.97
SH3GL3-204ENST00000492099 FAM71BQ8TC56 605 aa27.35■■□□□ 1.97
SH3GL3-204ENST00000492099 WRAP53Q9BUR4 548 aaKnown RBP27.35■■□□□ 1.97
SH3GL3-204ENST00000492099 SPEGQ15772 3267 aa27.35■■□□□ 1.97
SH3GL3-204ENST00000492099 NEMP2A6NFY4 417 aa27.34■■□□□ 1.97
SH3GL3-204ENST00000492099 RIOK3O14730 519 aaKnown RBP27.34■■□□□ 1.97
SH3GL3-204ENST00000492099 CSF2P04141 144 aa27.34■■□□□ 1.97
SH3GL3-204ENST00000492099 HSPA9P38646 679 aaKnown RBP27.34■■□□□ 1.97
SH3GL3-204ENST00000492099 ACADVLP49748 655 aa27.34■■□□□ 1.97
SH3GL3-204ENST00000492099 YPEL5P62699 121 aa27.34■■□□□ 1.97
SH3GL3-204ENST00000492099 POLR2LP62875 67 aaKnown RBP27.34■■□□□ 1.97
SH3GL3-204ENST00000492099 SLC10A7Q0GE19 358 aa27.34■■□□□ 1.97
SH3GL3-204ENST00000492099 ILKQ13418 452 aa27.34■■□□□ 1.97
SH3GL3-204ENST00000492099 PTK2BQ14289 1009 aa27.34■■□□□ 1.97
SH3GL3-204ENST00000492099 DHRS13Q6UX07 377 aa27.34■■□□□ 1.97
SH3GL3-204ENST00000492099 LRRC49Q8IUZ0 686 aa27.34■■□□□ 1.97
SH3GL3-204ENST00000492099 BBS5Q8N3I7 341 aa27.34■■□□□ 1.97
SH3GL3-204ENST00000492099 OR4C6Q8NH72 309 aa27.34■■□□□ 1.97
SH3GL3-204ENST00000492099 NSMCE1Q8WV22 266 aa27.34■■□□□ 1.97
SH3GL3-204ENST00000492099 PACSIN1Q9BY11 444 aa27.34■■□□□ 1.97
SH3GL3-204ENST00000492099 UCKL1Q9NWZ5 548 aa27.34■■□□□ 1.97
SH3GL3-204ENST00000492099 ZMIZ1Q9ULJ6 1067 aa27.34■■□□□ 1.97
SH3GL3-204ENST00000492099 ATP8A1Q9Y2Q0 1164 aa27.34■■□□□ 1.97
SH3GL3-204ENST00000492099 AKAP13Q12802 2813 aa27.34■■□□□ 1.97
SH3GL3-204ENST00000492099 USP24Q9UPU5 2620 aa27.34■■□□□ 1.97
SH3GL3-204ENST00000492099 KMT2BQ9UMN6 2715 aaPredicted RBP27.33■■□□□ 1.97
SH3GL3-204ENST00000492099 H3BM21 787 aa27.33■■□□□ 1.97
SH3GL3-204ENST00000492099 MAFKO60675 156 aa27.33■■□□□ 1.97
SH3GL3-204ENST00000492099 MFAP3LO75121 409 aa27.33■■□□□ 1.97
SH3GL3-204ENST00000492099 TMEM253P0C7T8 217 aa27.33■■□□□ 1.97
SH3GL3-204ENST00000492099 ALPPL2P10696 532 aa27.33■■□□□ 1.97
SH3GL3-204ENST00000492099 IL4RP24394 825 aa27.33■■□□□ 1.97
SH3GL3-204ENST00000492099 ZNF235Q14590 738 aa27.33■■□□□ 1.97
SH3GL3-204ENST00000492099 PROX2Q3B8N5 592 aa27.33■■□□□ 1.97
SH3GL3-204ENST00000492099 TMPRSS12Q86WS5 348 aa27.33■■□□□ 1.97
SH3GL3-204ENST00000492099 ATPAF2Q8N5M1 289 aa27.33■■□□□ 1.97
SH3GL3-204ENST00000492099 ZCCHC14Q8WYQ9 949 aaKnown RBP27.33■■□□□ 1.97
SH3GL3-204ENST00000492099 ECHDC3Q96DC8 303 aa27.33■■□□□ 1.97
SH3GL3-204ENST00000492099 CCDC42Q96M95 316 aa27.33■■□□□ 1.97
SH3GL3-204ENST00000492099 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP27.32■■□□□ 1.96
SH3GL3-204ENST00000492099 TRIM38O00635 465 aa27.32■■□□□ 1.96
SH3GL3-204ENST00000492099 MUSKO15146 869 aa27.32■■□□□ 1.96
SH3GL3-204ENST00000492099 SIGLEC6O43699 453 aa27.32■■□□□ 1.96
SH3GL3-204ENST00000492099 PEX11BO96011 259 aa27.32■■□□□ 1.96
SH3GL3-204ENST00000492099 NME1P15531 152 aaKnown RBP27.32■■□□□ 1.96
SH3GL3-204ENST00000492099 IGFALSP35858 605 aa27.32■■□□□ 1.96
SH3GL3-204ENST00000492099 ARSEP51690 589 aa27.32■■□□□ 1.96
SH3GL3-204ENST00000492099 THOP1P52888 689 aa27.32■■□□□ 1.96
SH3GL3-204ENST00000492099 ZNF542PQ5EBM4 170 aa27.32■■□□□ 1.96
SH3GL3-204ENST00000492099 ZSWIM9Q86XI8 627 aa27.32■■□□□ 1.96
SH3GL3-204ENST00000492099 MAP7D3Q8IWC1 876 aa27.32■■□□□ 1.96
SH3GL3-204ENST00000492099 PAF1Q8N7H5 531 aa27.32■■□□□ 1.96
SH3GL3-204ENST00000492099 TP53I13Q8NBR0 393 aaPredicted RBP27.32■■□□□ 1.96
SH3GL3-204ENST00000492099 KCTD6Q8NC69 237 aa27.32■■□□□ 1.96
SH3GL3-204ENST00000492099 ARID1BQ8NFD5 2236 aaPredicted RBP27.31■■□□□ 1.96
SH3GL3-204ENST00000492099 CFAP69A5D8W1 941 aa27.31■■□□□ 1.96
SH3GL3-204ENST00000492099 SCAMP1O15126 338 aa27.31■■□□□ 1.96
SH3GL3-204ENST00000492099 KRT7P08729 469 aa27.31■■□□□ 1.96
SH3GL3-204ENST00000492099 C6P13671 934 aa27.31■■□□□ 1.96
SH3GL3-204ENST00000492099 MMP12P39900 470 aa27.31■■□□□ 1.96
SH3GL3-204ENST00000492099 ADKP55263 362 aaKnown RBP27.31■■□□□ 1.96
SH3GL3-204ENST00000492099 MMRN1Q13201 1228 aa27.31■■□□□ 1.96
SH3GL3-204ENST00000492099 LRRC14Q15048 493 aa27.31■■□□□ 1.96
SH3GL3-204ENST00000492099 PDK2Q15119 407 aa27.31■■□□□ 1.96
SH3GL3-204ENST00000492099 CNGA4Q8IV77 575 aa27.31■■□□□ 1.96
SH3GL3-204ENST00000492099 CHP1Q99653 195 aa27.31■■□□□ 1.96
SH3GL3-204ENST00000492099 DUSP23Q9BVJ7 150 aa27.31■■□□□ 1.96
SH3GL3-204ENST00000492099 NHEJ1Q9H9Q4 299 aaPredicted RBP27.31■■□□□ 1.96
SH3GL3-204ENST00000492099 MBNL1Q9NR56 388 aaKnown RBP27.31■■□□□ 1.96
SH3GL3-204ENST00000492099 NLGN3Q9NZ94 848 aa27.31■■□□□ 1.96
SH3GL3-204ENST00000492099 IGF2RP11717 2491 aa27.3■■□□□ 1.96
SH3GL3-204ENST00000492099 PTPRBP23467 1997 aa27.3■■□□□ 1.96
SH3GL3-204ENST00000492099 A0A1W2PQ67 120 aa27.3■■□□□ 1.96
SH3GL3-204ENST00000492099 TRAFD1O14545 582 aaPredicted RBP27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms