RNA–Protein interactions for RNA: ENST00000491990.5

NUP188-209, Transcript of nucleoporin 188, humanhuman

TSL 5

Gene NUP188, Length 381 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-209ENST00000491990 TSPAN11A1L157 253 aa23.34■■□□□ 1.33
NUP188-209ENST00000491990 DDX3XO00571 662 aaKnown RBP eCLIP23.34■■□□□ 1.339e-14■■■□□ 16.1
NUP188-209ENST00000491990 TPP1O14773 563 aa23.34■■□□□ 1.33
NUP188-209ENST00000491990 MYF5P13349 255 aa23.34■■□□□ 1.33
NUP188-209ENST00000491990 MIPP30301 263 aa23.34■■□□□ 1.33
NUP188-209ENST00000491990 ZNF135P52742 658 aaPredicted RBP23.34■■□□□ 1.33
NUP188-209ENST00000491990 UGP2Q16851 508 aa23.34■■□□□ 1.33
NUP188-209ENST00000491990 E4F1Q66K89 784 aaPredicted RBP23.34■■□□□ 1.33
NUP188-209ENST00000491990 RFX8Q6ZV50 586 aa23.34■■□□□ 1.33
NUP188-209ENST00000491990 TP53I13Q8NBR0 393 aaPredicted RBP23.34■■□□□ 1.33
NUP188-209ENST00000491990 ZNF653Q96CK0 615 aa23.34■■□□□ 1.33
NUP188-209ENST00000491990 NAP1L5Q96NT1 182 aaPredicted RBP23.34■■□□□ 1.33
NUP188-209ENST00000491990 TUBGCP5Q96RT8 1024 aa23.34■■□□□ 1.33
NUP188-209ENST00000491990 IL12RB2Q99665 862 aa23.34■■□□□ 1.33
NUP188-209ENST00000491990 ABCG4Q9H172 646 aa23.34■■□□□ 1.33
NUP188-209ENST00000491990 APOBEC3BQ9UH17 382 aaKnown RBP23.34■■□□□ 1.33
NUP188-209ENST00000491990 SALL4Q9UJQ4 1053 aa23.34■■□□□ 1.33
NUP188-209ENST00000491990 U3KQA8 63 aa23.34■■□□□ 1.33
NUP188-209ENST00000491990 LRRK1Q38SD2 2015 aa23.33■■□□□ 1.33
NUP188-209ENST00000491990 ASXL3Q9C0F0 2248 aa23.33■■□□□ 1.33
NUP188-209ENST00000491990 PALMO75781 387 aa23.33■■□□□ 1.33
NUP188-209ENST00000491990 SERPINC1P01008 464 aa23.33■■□□□ 1.33
NUP188-209ENST00000491990 MYBL1P10243 752 aa23.33■■□□□ 1.33
NUP188-209ENST00000491990 ERCC2P18074 760 aa23.33■■□□□ 1.33
NUP188-209ENST00000491990 CSNK1DP48730 415 aa23.33■■□□□ 1.33
NUP188-209ENST00000491990 PPP6R3Q5H9R7 873 aaPredicted RBP23.33■■□□□ 1.33
NUP188-209ENST00000491990 CDCP2Q5VXM1 449 aa23.33■■□□□ 1.33
NUP188-209ENST00000491990 ERAP2Q6P179 960 aa23.33■■□□□ 1.33
NUP188-209ENST00000491990 BRAT1Q6PJG6 821 aa23.33■■□□□ 1.33
NUP188-209ENST00000491990 MACC1Q6ZN28 852 aa23.33■■□□□ 1.33
NUP188-209ENST00000491990 PHACTR4Q8IZ21 702 aa23.33■■□□□ 1.33
NUP188-209ENST00000491990 IFI44Q8TCB0 444 aa23.33■■□□□ 1.33
NUP188-209ENST00000491990 TBATAQ96M53 351 aa23.33■■□□□ 1.33
NUP188-209ENST00000491990 DEPDC7Q96QD5 511 aa23.33■■□□□ 1.33
NUP188-209ENST00000491990 TRIM7Q9C029 511 aa23.33■■□□□ 1.33
NUP188-209ENST00000491990 SP110Q9HB58 689 aa23.33■■□□□ 1.33
NUP188-209ENST00000491990 MRPL47Q9HD33 250 aaKnown RBP23.33■■□□□ 1.33
NUP188-209ENST00000491990 PCDH12Q9NPG4 1184 aa23.33■■□□□ 1.33
NUP188-209ENST00000491990 MBNL1Q9NR56 388 aaKnown RBP23.33■■□□□ 1.33
NUP188-209ENST00000491990 ANKRD36A6QL64 1941 aa23.32■■□□□ 1.32
NUP188-209ENST00000491990 LRCH4O75427 683 aa23.32■■□□□ 1.32
NUP188-209ENST00000491990 EIF4A3P38919 411 aaKnown RBP23.32■■□□□ 1.32
NUP188-209ENST00000491990 ABCG1P45844 678 aa23.32■■□□□ 1.32
NUP188-209ENST00000491990 HCAR3P49019 387 aa23.32■■□□□ 1.32
NUP188-209ENST00000491990 NR1I3Q14994 352 aa23.32■■□□□ 1.32
NUP188-209ENST00000491990 LRRC14Q15048 493 aa23.32■■□□□ 1.32
NUP188-209ENST00000491990 DEFB133Q30KQ1 61 aa23.32■■□□□ 1.32
NUP188-209ENST00000491990 PRRT3Q5FWE3 981 aa23.32■■□□□ 1.32
NUP188-209ENST00000491990 AFMIDQ63HM1 303 aa23.32■■□□□ 1.32
NUP188-209ENST00000491990 LRRC69Q6ZNQ3 347 aa23.32■■□□□ 1.32
NUP188-209ENST00000491990 SRLQ86TD4 932 aa23.32■■□□□ 1.32
NUP188-209ENST00000491990 RBFAQ8N0V3 343 aa23.32■■□□□ 1.32
NUP188-209ENST00000491990 GLMNQ92990 594 aa23.32■■□□□ 1.32
NUP188-209ENST00000491990 SLC13A1Q9BZW2 595 aa23.32■■□□□ 1.32
NUP188-209ENST00000491990 ATP13A3Q9H7F0 1226 aa23.32■■□□□ 1.32
NUP188-209ENST00000491990 DFFAO00273 331 aa23.31■■□□□ 1.32
NUP188-209ENST00000491990 RRP8O43159 456 aaKnown RBP23.31■■□□□ 1.32
NUP188-209ENST00000491990 TLX3O43711 291 aaPredicted RBP23.31■■□□□ 1.32
NUP188-209ENST00000491990 BRINP1O60477 761 aa23.31■■□□□ 1.32
NUP188-209ENST00000491990 HOXB3P14651 431 aaPredicted RBP23.31■■□□□ 1.32
NUP188-209ENST00000491990 SERPINA4P29622 427 aa23.31■■□□□ 1.32
NUP188-209ENST00000491990 EIF2S3P41091 472 aaKnown RBP23.31■■□□□ 1.32
NUP188-209ENST00000491990 PEX5P50542 639 aa23.31■■□□□ 1.32
NUP188-209ENST00000491990 RFTN1Q14699 578 aaPredicted RBP23.31■■□□□ 1.32
NUP188-209ENST00000491990 IQCB1Q15051 598 aa23.31■■□□□ 1.32
NUP188-209ENST00000491990 IRF4Q15306 451 aa23.31■■□□□ 1.32
NUP188-209ENST00000491990 FIGNQ5HY92 759 aa23.31■■□□□ 1.32
NUP188-209ENST00000491990 FAXCQ5TGI0 409 aa23.31■■□□□ 1.32
NUP188-209ENST00000491990 CYP4V2Q6ZWL3 525 aaPredicted RBP23.31■■□□□ 1.32
NUP188-209ENST00000491990 CAMK1DQ8IU85 385 aa23.31■■□□□ 1.32
NUP188-209ENST00000491990 ARHGAP12Q8IWW6 846 aa23.31■■□□□ 1.32
NUP188-209ENST00000491990 TSEN2Q8NCE0 465 aaKnown RBP23.31■■□□□ 1.32
NUP188-209ENST00000491990 MAPK15Q8TD08 544 aa23.31■■□□□ 1.32
NUP188-209ENST00000491990 CINPQ9BW66 212 aaPredicted RBP23.31■■□□□ 1.32
NUP188-209ENST00000491990 TCEAL2Q9H3H9 227 aaPredicted RBP23.31■■□□□ 1.32
NUP188-209ENST00000491990 MYO1AQ9UBC5 1043 aa23.31■■□□□ 1.32
NUP188-209ENST00000491990 COQ6Q9Y2Z9 468 aa23.31■■□□□ 1.32
NUP188-209ENST00000491990 CPED1A4D0V7 1026 aa23.3■■□□□ 1.32
NUP188-209ENST00000491990 TMEM110-MUSTN1A8MSY1 372 aa23.3■■□□□ 1.32
NUP188-209ENST00000491990 BUB1BO60566 1050 aaPredicted RBP23.3■■□□□ 1.32
NUP188-209ENST00000491990 SKILP12757 684 aa23.3■■□□□ 1.32
NUP188-209ENST00000491990 C6P13671 934 aa23.3■■□□□ 1.32
NUP188-209ENST00000491990 PCK1P35558 622 aa23.3■■□□□ 1.32
NUP188-209ENST00000491990 ACTN2P35609 894 aa23.3■■□□□ 1.32
NUP188-209ENST00000491990 RGRP47804 291 aa23.3■■□□□ 1.32
NUP188-209ENST00000491990 RPIAP49247 311 aa23.3■■□□□ 1.32
NUP188-209ENST00000491990 BLKP51451 505 aa23.3■■□□□ 1.32
NUP188-209ENST00000491990 ADKP55263 362 aaKnown RBP23.3■■□□□ 1.32
NUP188-209ENST00000491990 PPARDQ03181 441 aa23.3■■□□□ 1.32
NUP188-209ENST00000491990 IL10RBQ08334 325 aa23.3■■□□□ 1.32
NUP188-209ENST00000491990 ACAP1Q15027 740 aa23.3■■□□□ 1.32
NUP188-209ENST00000491990 NR0B2Q15466 257 aa23.3■■□□□ 1.32
NUP188-209ENST00000491990 CDKN3Q16667 212 aa23.3■■□□□ 1.32
NUP188-209ENST00000491990 LZTR1Q8N653 840 aa23.3■■□□□ 1.32
NUP188-209ENST00000491990 SNIP1Q8TAD8 396 aaKnown RBP23.3■■□□□ 1.32
NUP188-209ENST00000491990 FGF11Q92914 225 aa23.3■■□□□ 1.32
NUP188-209ENST00000491990 LRRC61Q9BV99 259 aa23.3■■□□□ 1.32
NUP188-209ENST00000491990 ISCUQ9H1K1 167 aa23.3■■□□□ 1.32
NUP188-209ENST00000491990 ZWILCHQ9H900 591 aa23.3■■□□□ 1.32
NUP188-209ENST00000491990 CWC15Q9P013 229 aaKnown RBP23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms