RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 P2RY2P41231 377 aa9.54□□□□□ -0.88
BRCA1-219ENST00000491747 RASSF2P50749 326 aa9.54□□□□□ -0.88
BRCA1-219ENST00000491747 ECT2LQ008S8 904 aa9.54□□□□□ -0.88
BRCA1-219ENST00000491747 SEMA3BQ13214 749 aa9.54□□□□□ -0.88
BRCA1-219ENST00000491747 CAMK2GQ13555 558 aaPredicted RBP9.54□□□□□ -0.88
BRCA1-219ENST00000491747 TRIP13Q15645 432 aaPredicted RBP9.54□□□□□ -0.88
BRCA1-219ENST00000491747 ACBD5Q5T8D3 534 aaPredicted RBP9.54□□□□□ -0.88
BRCA1-219ENST00000491747 CGB2Q6NT52 195 aa9.54□□□□□ -0.88
BRCA1-219ENST00000491747 VSIG1Q86XK7 387 aa9.54□□□□□ -0.88
BRCA1-219ENST00000491747 CYP4X1Q8N118 509 aa9.54□□□□□ -0.88
BRCA1-219ENST00000491747 OR7D4Q8NG98 312 aa9.54□□□□□ -0.88
BRCA1-219ENST00000491747 LRRC37BQ96QE4 947 aa9.54□□□□□ -0.88
BRCA1-219ENST00000491747 DUSP15Q9H1R2 295 aaPredicted RBP9.54□□□□□ -0.88
BRCA1-219ENST00000491747 USH1CQ9Y6N9 552 aa9.54□□□□□ -0.88
BRCA1-219ENST00000491747 RALGAPA1Q6GYQ0 2036 aa9.54□□□□□ -0.88
BRCA1-219ENST00000491747 NUP205Q92621 2012 aa9.54□□□□□ -0.88
BRCA1-219ENST00000491747 HGSO14964 777 aaPredicted RBP9.53□□□□□ -0.88
BRCA1-219ENST00000491747 DCTN3O75935 186 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 ASLP04424 464 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 SRPRAP08240 638 aaKnown RBP9.53□□□□□ -0.88
BRCA1-219ENST00000491747 CALRP27797 417 aaKnown RBP9.53□□□□□ -0.88
BRCA1-219ENST00000491747 IL1R2P27930 398 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 L1CAMP32004 1257 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 VPS41P49754 854 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 MGAT5Q09328 741 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 CCNG2Q16589 344 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 PLK5Q496M5 336 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 TXNRD3NBQ6F5E7 133 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 RWDD4Q6NW29 188 aaKnown RBP9.53□□□□□ -0.88
BRCA1-219ENST00000491747 CEP68Q76N32 757 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 SETD3Q86TU7 594 aaPredicted RBP9.53□□□□□ -0.88
BRCA1-219ENST00000491747 CACUL1Q86Y37 369 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 AGGF1Q8N302 714 aaeCLIP9.53□□□□□ -0.88
BRCA1-219ENST00000491747 SPDL1Q96EA4 605 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 SNRNP25Q9BV90 132 aaKnown RBP9.53□□□□□ -0.88
BRCA1-219ENST00000491747 MUC3BQ9H195 1237 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 LRMDAQ9H2I8 198 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 ACTL7AQ9Y615 435 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 PPP1R12AO14974 1030 aaPredicted RBP9.53□□□□□ -0.88
BRCA1-219ENST00000491747 CREB3O43889 395 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 SYNCRIPO60506 623 aaKnown RBP9.53□□□□□ -0.88
BRCA1-219ENST00000491747 SIN3BO75182 1162 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 MT-CO1P00395 513 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 RHOQP17081 205 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 SLC18A1P54219 525 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 SPARCL1Q14515 664 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 STARD3Q14849 445 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 TMED2Q15363 201 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 USP39Q53GS9 565 aaKnown RBP9.53□□□□□ -0.88
BRCA1-219ENST00000491747 EFHC2Q5JST6 749 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 C9orf64Q5T6V5 341 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 IZUMO3Q5VZ72 239 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 FAM47EQ6ZV65 393 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 TMPRSS6Q8IU80 811 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 FRS2Q8WU20 508 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 INPP5DQ92835 1189 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 PTPRN2Q92932 1015 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 ERP27Q96DN0 273 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 ZC3H10Q96K80 434 aaKnown RBP9.53□□□□□ -0.88
BRCA1-219ENST00000491747 C9orf72Q96LT7 481 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 KCTD15Q96SI1 283 aaPredicted RBP9.53□□□□□ -0.88
BRCA1-219ENST00000491747 PAIP2Q9BPZ3 127 aaKnown RBP9.53□□□□□ -0.88
BRCA1-219ENST00000491747 NOL6Q9H6R4 1146 aaKnown RBP9.53□□□□□ -0.88
BRCA1-219ENST00000491747 PRDM16Q9HAZ2 1276 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 TMEM248Q9NWD8 314 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 EURLQ9NYK6 297 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 SENP1Q9P0U3 644 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 VPS28Q9UK41 221 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 AP4E1Q9UPM8 1137 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 TRIM33Q9UPN9 1127 aa9.53□□□□□ -0.88
BRCA1-219ENST00000491747 IGHV1OR15-9A0A0B4J2B8 117 aa9.52□□□□□ -0.88
BRCA1-219ENST00000491747 EXOC1LA0A1B0GW35 172 aa9.52□□□□□ -0.88
BRCA1-219ENST00000491747 CCDC189A1A4V9 331 aa9.52□□□□□ -0.88
BRCA1-219ENST00000491747 FOXO6A8MYZ6 492 aa9.52□□□□□ -0.88
BRCA1-219ENST00000491747 K7ERQ8 282 aa9.52□□□□□ -0.88
BRCA1-219ENST00000491747 RNF8O76064 485 aa9.52□□□□□ -0.88
BRCA1-219ENST00000491747 ACVRL1P37023 503 aa9.52□□□□□ -0.88
BRCA1-219ENST00000491747 AIF1P55008 147 aa9.52□□□□□ -0.88
BRCA1-219ENST00000491747 OXCT1P55809 520 aa9.52□□□□□ -0.88
BRCA1-219ENST00000491747 IRX1P78414 480 aaPredicted RBP9.52□□□□□ -0.88
BRCA1-219ENST00000491747 KLF1Q13351 362 aaPredicted RBP9.52□□□□□ -0.88
BRCA1-219ENST00000491747 HNRNPA1L2Q32P51 320 aaKnown RBP9.52□□□□□ -0.88
BRCA1-219ENST00000491747 CAPRIN2Q6IMN6 1127 aaKnown RBP9.52□□□□□ -0.88
BRCA1-219ENST00000491747 KIAA1324Q6UXG2 1013 aaKnown RBP9.52□□□□□ -0.88
BRCA1-219ENST00000491747 LINGO4Q6UY18 593 aa9.52□□□□□ -0.88
BRCA1-219ENST00000491747 RGS9BPQ6ZS82 235 aa9.52□□□□□ -0.88
BRCA1-219ENST00000491747 ZCCHC9Q8N567 271 aaKnown RBP9.52□□□□□ -0.88
BRCA1-219ENST00000491747 TEX9Q8N6V9 391 aa9.52□□□□□ -0.88
BRCA1-219ENST00000491747 OR2T3Q8NH03 318 aa9.52□□□□□ -0.88
BRCA1-219ENST00000491747 TTC25Q96NG3 672 aa9.52□□□□□ -0.88
BRCA1-219ENST00000491747 TMEM237Q96Q45 408 aa9.52□□□□□ -0.88
BRCA1-219ENST00000491747 RBM15Q96T37 977 aaKnown RBP eCLIP9.52□□□□□ -0.88
BRCA1-219ENST00000491747 DHX35Q9H5Z1 703 aaKnown RBP9.52□□□□□ -0.88
BRCA1-219ENST00000491747 VPS51Q9UID3 782 aa9.52□□□□□ -0.88
BRCA1-219ENST00000491747 CORO1CQ9ULV4 474 aaPredicted RBP9.52□□□□□ -0.88
BRCA1-219ENST00000491747 PHTF1Q9UMS5 762 aa9.52□□□□□ -0.88
BRCA1-219ENST00000491747 USP18Q9UMW8 372 aa9.52□□□□□ -0.88
BRCA1-219ENST00000491747 CYP8B1Q9UNU6 501 aa9.52□□□□□ -0.88
BRCA1-219ENST00000491747 NEU2Q9Y3R4 380 aa9.52□□□□□ -0.88
BRCA1-219ENST00000491747 ILVBLA1L0T0 632 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms