RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 ACADVLP49748 655 aa12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 TPI1P60174 286 aa12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 SNRPD1P62314 119 aaKnown RBP12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 RPS21P63220 83 aaKnown RBP12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 CAMK2BQ13554 666 aa12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 SMAD1Q15797 465 aaKnown RBP12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 CCDC157Q569K6 752 aa12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 ERMARDQ5T6L9 678 aa12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 KIAA1161Q6NSJ0 714 aa12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 DHRS13Q6UX07 377 aa12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 GDPD4Q6W3E5 623 aa12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 ARHGAP36Q6ZRI8 547 aa12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 Q6ZSR6 202 aa12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 OXR1Q8N573 874 aa12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 FEM1CQ96JP0 617 aa12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 EXOC2Q96KP1 924 aa12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 CNDP2Q96KP4 475 aaKnown RBP12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 NSMCE3Q96MG7 304 aa12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 GDAP1L1Q96MZ0 367 aa12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 LACRTQ9GZZ8 138 aa12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 KLHL11Q9NVR0 708 aa12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 KLF15Q9UIH9 416 aa12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 GUCA1BQ9UMX6 200 aa12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 PPP2R2CQ9Y2T4 447 aa12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 IGSF10Q6WRI0 2623 aa12.84□□□□□ -0.35
SEC61A1-206ENST00000491668 TDRD6O60522 2096 aaKnown RBP12.84□□□□□ -0.35
SEC61A1-206ENST00000491668 EEF2KO00418 725 aaKnown RBP12.84□□□□□ -0.35
SEC61A1-206ENST00000491668 PJA2O43164 708 aa12.84□□□□□ -0.35
SEC61A1-206ENST00000491668 TSPAN6O43657 245 aa12.84□□□□□ -0.35
SEC61A1-206ENST00000491668 BUB1BO60566 1050 aaPredicted RBP12.84□□□□□ -0.35
SEC61A1-206ENST00000491668 MAGEC1O60732 1142 aa12.84□□□□□ -0.35
SEC61A1-206ENST00000491668 LDOC1O95751 146 aaPredicted RBP12.84□□□□□ -0.35
SEC61A1-206ENST00000491668 DGKAP23743 735 aa12.84□□□□□ -0.35
SEC61A1-206ENST00000491668 HTR7P34969 479 aa12.84□□□□□ -0.35
SEC61A1-206ENST00000491668 ARHGAP25P42331 645 aa12.84□□□□□ -0.35
SEC61A1-206ENST00000491668 PAPOLAP51003 745 aaKnown RBP12.84□□□□□ -0.35
SEC61A1-206ENST00000491668 NDST2P52849 883 aa12.84□□□□□ -0.35
SEC61A1-206ENST00000491668 RHOAP61586 193 aa12.84□□□□□ -0.35
SEC61A1-206ENST00000491668 DPYSQ14117 519 aa12.84□□□□□ -0.35
SEC61A1-206ENST00000491668 FZD2Q14332 565 aa12.84□□□□□ -0.35
SEC61A1-206ENST00000491668 ACAP1Q15027 740 aa12.84□□□□□ -0.35
SEC61A1-206ENST00000491668 PROX2Q3B8N5 592 aa12.84□□□□□ -0.35
SEC61A1-206ENST00000491668 INAVAQ3KP66 663 aa12.84□□□□□ -0.35
SEC61A1-206ENST00000491668 ZNF542PQ5EBM4 170 aa12.84□□□□□ -0.35
SEC61A1-206ENST00000491668 TXNRD3NBQ6F5E7 133 aa12.84□□□□□ -0.35
SEC61A1-206ENST00000491668 RFX8Q6ZV50 586 aa12.84□□□□□ -0.35
SEC61A1-206ENST00000491668 ZNF354CQ86Y25 554 aa12.84□□□□□ -0.35
SEC61A1-206ENST00000491668 CASKIN2Q8WXE0 1202 aa12.84□□□□□ -0.35
SEC61A1-206ENST00000491668 RAB7BQ96AH8 199 aa12.84□□□□□ -0.35
SEC61A1-206ENST00000491668 CENPTQ96BT3 561 aa12.84□□□□□ -0.35
SEC61A1-206ENST00000491668 CALR3Q96L12 384 aaKnown RBP12.84□□□□□ -0.35
SEC61A1-206ENST00000491668 CALN1Q9BXU9 219 aa12.84□□□□□ -0.35
SEC61A1-206ENST00000491668 OSBPL1AQ9BXW6 950 aa12.84□□□□□ -0.35
SEC61A1-206ENST00000491668 LZTFL1Q9NQ48 299 aa12.84□□□□□ -0.35
SEC61A1-206ENST00000491668 CWC15Q9P013 229 aaKnown RBP12.84□□□□□ -0.35
SEC61A1-206ENST00000491668 DKK3Q9UBP4 350 aa12.84□□□□□ -0.35
SEC61A1-206ENST00000491668 RALYQ9UKM9 306 aaKnown RBP12.84□□□□□ -0.35
SEC61A1-206ENST00000491668 HS3ST3A1Q9Y663 406 aa12.84□□□□□ -0.35
SEC61A1-206ENST00000491668 DUSP10Q9Y6W6 482 aa12.84□□□□□ -0.35
SEC61A1-206ENST00000491668 BTNL10A8MVZ5 291 aa12.83□□□□□ -0.36
SEC61A1-206ENST00000491668 MUSKO15146 869 aa12.83□□□□□ -0.36
SEC61A1-206ENST00000491668 SIGLEC6O43699 453 aa12.83□□□□□ -0.36
SEC61A1-206ENST00000491668 PRPSAP2O60256 369 aa12.83□□□□□ -0.36
SEC61A1-206ENST00000491668 PIAS2O75928 621 aa12.83□□□□□ -0.36
SEC61A1-206ENST00000491668 PROSCO94903 275 aa12.83□□□□□ -0.36
SEC61A1-206ENST00000491668 PIGNO95427 931 aa12.83□□□□□ -0.36
SEC61A1-206ENST00000491668 IGSF6O95976 241 aa12.83□□□□□ -0.36
SEC61A1-206ENST00000491668 ERCC2P18074 760 aa12.83□□□□□ -0.36
SEC61A1-206ENST00000491668 PFN3P60673 137 aa12.83□□□□□ -0.36
SEC61A1-206ENST00000491668 HADHQ16836 314 aaKnown RBP12.83□□□□□ -0.36
SEC61A1-206ENST00000491668 PPP6R3Q5H9R7 873 aaPredicted RBP12.83□□□□□ -0.36
SEC61A1-206ENST00000491668 ZFYVE27Q5T4F4 411 aa12.83□□□□□ -0.36
SEC61A1-206ENST00000491668 KYAT3Q6YP21 454 aaKnown RBP12.83□□□□□ -0.36
SEC61A1-206ENST00000491668 DAAM2Q86T65 1068 aa12.83□□□□□ -0.36
SEC61A1-206ENST00000491668 TTC7BQ86TV6 843 aa12.83□□□□□ -0.36
SEC61A1-206ENST00000491668 ZSWIM9Q86XI8 627 aa12.83□□□□□ -0.36
SEC61A1-206ENST00000491668 ASB12Q8WXK4 309 aa12.83□□□□□ -0.36
SEC61A1-206ENST00000491668 LENG8Q96PV6 779 aaPredicted RBP12.83□□□□□ -0.36
SEC61A1-206ENST00000491668 CPEB1Q9BZB8 566 aaKnown RBP12.83□□□□□ -0.36
SEC61A1-206ENST00000491668 ETNK2Q9NVF9 386 aa12.83□□□□□ -0.36
SEC61A1-206ENST00000491668 TRMT1Q9NXH9 659 aaKnown RBP12.83□□□□□ -0.36
SEC61A1-206ENST00000491668 UBA2Q9UBT2 640 aaPredicted RBP12.83□□□□□ -0.36
SEC61A1-206ENST00000491668 TRIM10Q9UDY6 481 aa12.83□□□□□ -0.36
SEC61A1-206ENST00000491668 PNMA8BQ9ULN7 279 aaPredicted RBP12.83□□□□□ -0.36
SEC61A1-206ENST00000491668 PCDHGA1Q9Y5H4 931 aa12.83□□□□□ -0.36
SEC61A1-206ENST00000491668 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.83□□□□□ -0.36
SEC61A1-206ENST00000491668 LRRK1Q38SD2 2015 aa12.83□□□□□ -0.36
SEC61A1-206ENST00000491668 LOC400499M0QZD8 3231 aa12.82□□□□□ -0.36
SEC61A1-206ENST00000491668 LY6G6EA0A0G2JKS1 128 aa12.82□□□□□ -0.36
SEC61A1-206ENST00000491668 SPTY2D1-AS1A0A0U1RR47 76 aa12.82□□□□□ -0.36
SEC61A1-206ENST00000491668 TSPAN11A1L157 253 aa12.82□□□□□ -0.36
SEC61A1-206ENST00000491668 A6NNZ2 444 aa12.82□□□□□ -0.36
SEC61A1-206ENST00000491668 SPOPO43791 374 aa12.82□□□□□ -0.36
SEC61A1-206ENST00000491668 MMP20O60882 483 aa12.82□□□□□ -0.36
SEC61A1-206ENST00000491668 MTA2O94776 668 aa12.82□□□□□ -0.36
SEC61A1-206ENST00000491668 PCK1P35558 622 aa12.82□□□□□ -0.36
SEC61A1-206ENST00000491668 GJC1P36383 396 aa12.82□□□□□ -0.36
SEC61A1-206ENST00000491668 HCAR3P49019 387 aa12.82□□□□□ -0.36
SEC61A1-206ENST00000491668 HADHBP55084 474 aaKnown RBP12.82□□□□□ -0.36
SEC61A1-206ENST00000491668 ZNF211Q13398 564 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms