RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	ZYG11B	Q9C0D3	744 aa		19.47	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	SEMA6C	Q9H3T2	930 aa		19.47	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	SYNC	Q9H7C4	482 aa		19.47	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	19.47	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	KL	Q9UEF7	1012 aa		19.47	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	ENO4	A6NNW6	628 aa		19.46	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	CAPN5	O15484	640 aa	Predicted RBP	19.46	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	CD160	O95971	181 aa		19.46	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	GSR	P00390	522 aa		19.46	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	RNASE9	P60153	205 aa	Known RBP	19.46	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	KRT85	P78386	507 aa		19.46	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	PNOC	Q13519	176 aa		19.46	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	PKP1	Q13835	747 aa		19.46	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	NFATC4	Q14934	902 aa		19.46	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	IRF4	Q15306	451 aa		19.46	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	TAF8	Q7Z7C8	310 aa		19.46	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	PGAP3	Q96FM1	320 aa	Predicted RBP	19.46	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	HAPLN3	Q96S86	360 aa		19.46	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	RBM15	Q96T37	977 aa	Known RBP eCLIP	19.46	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	ZNF71	Q9NQZ8	489 aa	Predicted RBP	19.46	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	ZNF212	Q9UDV6	495 aa		19.46	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	HPCAL4	Q9UM19	191 aa		19.46	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	ACTL7A	Q9Y615	435 aa		19.46	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	ZFC3H1	O60293	1989 aa	Known RBP	19.46	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	NBPF19	A0A087WUL8	3843 aa		19.45	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	PSMA7	O14818	248 aa		19.45	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	ZW10	O43264	779 aa		19.45	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	NUDT21	O43809	227 aa	Known RBP	19.45	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	CPNE6	O95741	557 aa		19.45	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	CCL4	P13236	92 aa		19.45	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	USP8	P40818	1118 aa		19.45	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	SULT1E1	P49888	294 aa		19.45	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	RAD51	Q06609	339 aa		19.45	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	STIM1	Q13586	685 aa		19.45	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	C16orf72	Q14CZ0	275 aa		19.45	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	MAP9	Q49MG5	647 aa		19.45	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	C14orf28	Q4W4Y0	310 aa		19.45	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	OTUD1	Q5VV17	481 aa	Predicted RBP	19.45	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	TMPRSS9	Q7Z410	1059 aa		19.45	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	ZDHHC17	Q8IUH5	632 aa		19.45	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	DRC7	Q8IY82	874 aa		19.45	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	NT5C3B	Q969T7	300 aa		19.45	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	FAM81B	Q96LP2	452 aa		19.45	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	WRAP53	Q9BUR4	548 aa	Known RBP	19.45	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	INTS2	Q9H0H0	1204 aa	Known RBP	19.45	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	GOLPH3L	Q9H4A5	285 aa		19.45	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	PCDHGC3	Q9UN70	934 aa		19.45	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	PCDHGA3	Q9Y5H0	932 aa		19.45	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	DGKB	Q9Y6T7	804 aa		19.45	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	ICE1	Q9Y2F5	2266 aa		19.45	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	RP1L1	Q8IWN7	2480 aa	Predicted RBP	19.45	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	ZNF891	A8MT65	544 aa	Predicted RBP	19.44	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	HGS	O14964	777 aa	Predicted RBP	19.44	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	SMC2	O95347	1197 aa		19.44	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	ERBB2	P04626	1255 aa		19.44	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	LIF	P15018	202 aa		19.44	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	TFE3	P19532	575 aa	Predicted RBP	19.44	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	INPP5A	Q14642	412 aa		19.44	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	WSCD2	Q2TBF2	565 aa		19.44	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	EFHC2	Q5JST6	749 aa		19.44	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	LRRC73	Q5JTD7	316 aa		19.44	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	ATCAY	Q86WG3	371 aa		19.44	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	PASD1	Q8IV76	773 aa		19.44	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	C1orf131	Q8NDD1	294 aa	Known RBP	19.44	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	ARHGEF2	Q92974	986 aa	Known RBP	19.44	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	DHTKD1	Q96HY7	919 aa	Predicted RBP	19.44	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	WDR92	Q96MX6	357 aa		19.44	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	DPEP2	Q9H4A9	486 aa		19.44	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	TMPRSS4	Q9NRS4	437 aa		19.44	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	PLAA	Q9Y263	795 aa		19.44	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	TIMP2	P16035	220 aa		19.43	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	XPA	P23025	273 aa	Predicted RBP	19.43	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	SUOX	P51687	545 aa		19.43	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	B4GALNT1	Q00973	533 aa		19.43	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	ELP6	Q0PNE2	266 aa		19.43	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	HLTF	Q14527	1009 aa	Known RBP eCLIP	19.43	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	CLPP	Q16740	277 aa	Predicted RBP	19.43	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	SLC25A52	Q3SY17	297 aa		19.43	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	TMEM52B	Q4KMG9	183 aa		19.43	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	IRF2BP1	Q8IU81	584 aa		19.43	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	CACNA2D3	Q8IZS8	1091 aa		19.43	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	CCDC112	Q8NEF3	446 aa		19.43	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	RDH14	Q9HBH5	336 aa		19.43	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	PPARGC1A	Q9UBK2	798 aa	Known RBP	19.43	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	DKK3	Q9UBP4	350 aa		19.43	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	DACH1	Q9UI36	760 aa		19.43	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	OR1A2	Q9Y585	309 aa		19.43	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	TEP1	Q99973	2627 aa	Known RBP	19.42	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	B4GAT1	O43505	415 aa		19.42	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	FGF3	P11487	239 aa	Predicted RBP	19.42	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	ITIH2	P19823	946 aa		19.42	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	UGT1A3	P35503	534 aa		19.42	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	KRT9	P35527	623 aa		19.42	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	ACVRL1	P37023	503 aa		19.42	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	AMZ1	Q400G9	498 aa		19.42	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	ARTN	Q5T4W7	220 aa		19.42	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	SNX21	Q969T3	373 aa		19.42	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	VOPP1	Q96AW1	172 aa		19.42	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	TBCB	Q99426	244 aa		19.42	■□□□□ 0.7
CDK5RAP2-218	ENST00000491334	RETREG1	Q9H6L5	497 aa		19.42	■□□□□ 0.7

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms