RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 CNTFP26441 200 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 HSPA13P48723 471 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 HNRNPFP52597 415 aaKnown RBP10.26□□□□□ -0.77
BRD9-209ENST00000490814 PRRT2Q7Z6L0 340 aaPredicted RBP10.26□□□□□ -0.77
BRD9-209ENST00000490814 KIAA2013Q8IYS2 634 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 DEFB106AQ8N104 65 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 ATP6V0D2Q8N8Y2 350 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 MFSD3Q96ES6 412 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 RMND5BQ96G75 393 aaPredicted RBP10.26□□□□□ -0.77
BRD9-209ENST00000490814 OLFM1Q99784 485 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 PDZD7Q9H5P4 517 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 PTPRHQ9HD43 1115 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 NDFIP2Q9NV92 336 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 MOCS1Q9NZB8 636 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 ATP11BQ9Y2G3 1177 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 HBP1O60381 514 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 MT-CO1P00395 513 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 LTFP02788 710 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 ELNP15502 786 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 PTPN1P18031 435 aaKnown RBP10.26□□□□□ -0.77
BRD9-209ENST00000490814 TPSB2P20231 275 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 NR4A1P22736 598 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 ATICP31939 592 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 SPRP35270 261 aaPredicted RBP10.26□□□□□ -0.77
BRD9-209ENST00000490814 NAGLUP54802 743 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 PITX1P78337 314 aaPredicted RBP10.26□□□□□ -0.77
BRD9-209ENST00000490814 KCNC4Q03721 635 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 CDK18Q07002 472 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 SPCS2Q15005 226 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 TPSAB1Q15661 275 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 ZFP1Q6P2D0 407 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 LAYNQ6UX15 382 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 CYP2R1Q6VVX0 501 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 ATG14Q6ZNE5 492 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 RNF135Q8IUD6 432 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 PCDH20Q8N6Y1 951 aaKnown RBP10.26□□□□□ -0.77
BRD9-209ENST00000490814 MAPK15Q8TD08 544 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 APBB2Q92870 758 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 SORT1Q99523 831 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 WDR41Q9HAD4 459 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 DNAJC28Q9NX36 388 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 RNF186Q9NXI6 227 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 RBPJLQ9UBG7 517 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 SPEF1Q9Y4P9 236 aa10.26□□□□□ -0.77
BRD9-209ENST00000490814 DNAH12Q6ZR08 3092 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 KPNA7A9QM74 516 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 CENPBD1B2RD01 187 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 ZBTB42B2RXF5 422 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 M0QYT0 321 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 TK2O00142 265 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 RNASEH2AO75792 299 aaKnown RBP10.25□□□□□ -0.77
BRD9-209ENST00000490814 MYL4P12829 197 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 STK11Q15831 433 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 CELF3Q5SZQ8 465 aaKnown RBP10.25□□□□□ -0.77
BRD9-209ENST00000490814 BTBD8Q5XKL5 378 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 NCBP2-AS2Q69YL0 99 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 NAPRTQ6XQN6 538 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 HEATR4Q86WZ0 1026 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 CPSF7Q8N684 471 aaKnown RBP10.25□□□□□ -0.77
BRD9-209ENST00000490814 SLC2A14Q8TDB8 520 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 PEX13Q92968 403 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 QKIQ96PU8 341 aaKnown RBP eCLIP10.25□□□□□ -0.77
BRD9-209ENST00000490814 CIB1Q99828 191 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 UQCC2Q9BRT2 126 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 MED10Q9BTT4 135 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 ILKAPQ9H0C8 392 aaPredicted RBP10.25□□□□□ -0.77
BRD9-209ENST00000490814 STN1Q9H668 368 aaKnown RBP10.25□□□□□ -0.77
BRD9-209ENST00000490814 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.25□□□□□ -0.77
BRD9-209ENST00000490814 GTSE1Q9NYZ3 720 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 EBF1Q9UH73 591 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 RGSL1A5PLK6 1076 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 SNTNA6NMZ2 147 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 SH3BP5O60239 455 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 TRIM13O60858 407 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 KCNJ13O60928 360 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 PIGNO95427 931 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 MCF2P10911 925 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 JAK1P23458 1154 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 AKAP5P24588 427 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 ACAT1P24752 427 aaKnown RBP10.25□□□□□ -0.77
BRD9-209ENST00000490814 NDST2P52849 883 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 ADIGQ0VDE8 80 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 SEMA5AQ13591 1074 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 CEACAM7Q14002 265 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 USP10Q14694 798 aaKnown RBP10.25□□□□□ -0.77
BRD9-209ENST00000490814 CERCAMQ5T4B2 595 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 FSTL4Q6MZW2 842 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 XKR5Q6UX68 686 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 CPNE9Q8IYJ1 553 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 LINC00469Q8N7U9 141 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 SNX31Q8N9S9 440 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 ATL1Q8WXF7 558 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 LRTOMTQ8WZ04 291 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 NPAS2Q99743 824 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 OMDQ99983 421 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 ASB7Q9H672 318 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 NMRAL1Q9HBL8 299 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 IGSF9Q9P2J2 1179 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 GNPTGQ9UJJ9 305 aa10.25□□□□□ -0.77
BRD9-209ENST00000490814 VANGL2Q9ULK5 521 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms