RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 LRRC14Q15048 493 aa19.92■□□□□ 0.78
SREBF1-216ENST00000490796 CYTH1Q15438 398 aa19.92■□□□□ 0.78
SREBF1-216ENST00000490796 FILIP1LQ4L180 1135 aa19.92■□□□□ 0.78
SREBF1-216ENST00000490796 PPP1R15BQ5SWA1 713 aa19.92■□□□□ 0.78
SREBF1-216ENST00000490796 ESRP1Q6NXG1 681 aaKnown RBP19.92■□□□□ 0.78
SREBF1-216ENST00000490796 GUSBP11Q6P575 273 aa19.92■□□□□ 0.78
SREBF1-216ENST00000490796 MACC1Q6ZN28 852 aa19.92■□□□□ 0.78
SREBF1-216ENST00000490796 HCAR2Q8TDS4 363 aa19.92■□□□□ 0.78
SREBF1-216ENST00000490796 SCG3Q8WXD2 468 aaKnown RBP19.92■□□□□ 0.78
SREBF1-216ENST00000490796 NAT6Q93015 286 aa19.92■□□□□ 0.78
SREBF1-216ENST00000490796 FCRL3Q96P31 734 aaPredicted RBP19.92■□□□□ 0.78
SREBF1-216ENST00000490796 SUV39H2Q9H5I1 410 aa19.92■□□□□ 0.78
SREBF1-216ENST00000490796 POLR1BQ9H9Y6 1135 aa19.92■□□□□ 0.78
SREBF1-216ENST00000490796 MBNL1Q9NR56 388 aaKnown RBP19.92■□□□□ 0.78
SREBF1-216ENST00000490796 GPATCH2LQ9NWQ4 482 aa19.92■□□□□ 0.78
SREBF1-216ENST00000490796 LHX3Q9UBR4 397 aa19.92■□□□□ 0.78
SREBF1-216ENST00000490796 U3KQA8 63 aa19.92■□□□□ 0.78
SREBF1-216ENST00000490796 TMEM110-MUSTN1A8MSY1 372 aa19.91■□□□□ 0.78
SREBF1-216ENST00000490796 EIF3CLB5ME19 914 aaKnown RBP19.91■□□□□ 0.78
SREBF1-216ENST00000490796 LMO7DNF2Z398 122 aa19.91■□□□□ 0.78
SREBF1-216ENST00000490796 LZTS3O60299 673 aaPredicted RBP19.91■□□□□ 0.78
SREBF1-216ENST00000490796 RNF8O76064 485 aa19.91■□□□□ 0.78
SREBF1-216ENST00000490796 CTSEP14091 401 aa19.91■□□□□ 0.78
SREBF1-216ENST00000490796 LSSP48449 732 aa19.91■□□□□ 0.78
SREBF1-216ENST00000490796 IRF4Q15306 451 aa19.91■□□□□ 0.78
SREBF1-216ENST00000490796 TMEM52BQ4KMG9 183 aa19.91■□□□□ 0.78
SREBF1-216ENST00000490796 BROXQ5VW32 411 aa19.91■□□□□ 0.78
SREBF1-216ENST00000490796 TP53I13Q8NBR0 393 aaPredicted RBP19.91■□□□□ 0.78
SREBF1-216ENST00000490796 ATL2Q8NHH9 583 aa19.91■□□□□ 0.78
SREBF1-216ENST00000490796 NAF1Q96HR8 494 aaKnown RBP19.91■□□□□ 0.78
SREBF1-216ENST00000490796 CELF6Q96J87 481 aaKnown RBP19.91■□□□□ 0.78
SREBF1-216ENST00000490796 TBATAQ96M53 351 aa19.91■□□□□ 0.78
SREBF1-216ENST00000490796 ZNF641Q96N77 438 aaPredicted RBP19.91■□□□□ 0.78
SREBF1-216ENST00000490796 BBC3Q96PG8 261 aaPredicted RBP19.91■□□□□ 0.78
SREBF1-216ENST00000490796 EIF3CQ99613 913 aaKnown RBP19.91■□□□□ 0.78
SREBF1-216ENST00000490796 TCEAL2Q9H3H9 227 aaPredicted RBP19.91■□□□□ 0.78
SREBF1-216ENST00000490796 PRORYQ9H606 182 aa19.91■□□□□ 0.78
SREBF1-216ENST00000490796 SYNDIG1Q9H7V2 258 aa19.91■□□□□ 0.78
SREBF1-216ENST00000490796 MYO6Q9UM54 1294 aa19.91■□□□□ 0.78
SREBF1-216ENST00000490796 EME2A4GXA9 379 aaPredicted RBP19.9■□□□□ 0.78
SREBF1-216ENST00000490796 PRAMEF11O60813 436 aa19.9■□□□□ 0.78
SREBF1-216ENST00000490796 PALMO75781 387 aa19.9■□□□□ 0.78
SREBF1-216ENST00000490796 ATP1A3P13637 1013 aa19.9■□□□□ 0.78
SREBF1-216ENST00000490796 TGM2P21980 687 aa19.9■□□□□ 0.78
SREBF1-216ENST00000490796 RBMS1P29558 406 aaKnown RBP19.9■□□□□ 0.78
SREBF1-216ENST00000490796 PEX5P50542 639 aa19.9■□□□□ 0.78
SREBF1-216ENST00000490796 NCAPHQ15003 741 aa19.9■□□□□ 0.78
SREBF1-216ENST00000490796 ELOCQ15369 112 aa19.9■□□□□ 0.78
SREBF1-216ENST00000490796 ASIC2Q16515 512 aa19.9■□□□□ 0.78
SREBF1-216ENST00000490796 UGP2Q16851 508 aa19.9■□□□□ 0.78
SREBF1-216ENST00000490796 ISXQ2M1V0 245 aa19.9■□□□□ 0.78
SREBF1-216ENST00000490796 C6orf132Q5T0Z8 1188 aa19.9■□□□□ 0.78
SREBF1-216ENST00000490796 ERMARDQ5T6L9 678 aa19.9■□□□□ 0.78
SREBF1-216ENST00000490796 BRAT1Q6PJG6 821 aa19.9■□□□□ 0.78
SREBF1-216ENST00000490796 CRTC1Q6UUV9 634 aa19.9■□□□□ 0.78
SREBF1-216ENST00000490796 RBM44Q6ZP01 1051 aaKnown RBP19.9■□□□□ 0.78
SREBF1-216ENST00000490796 IRF2BP2Q7Z5L9 587 aa19.9■□□□□ 0.78
SREBF1-216ENST00000490796 HID1Q8IV36 788 aa19.9■□□□□ 0.78
SREBF1-216ENST00000490796 FSTL5Q8N475 847 aaPredicted RBP19.9■□□□□ 0.78
SREBF1-216ENST00000490796 VOPP1Q96AW1 172 aa19.9■□□□□ 0.78
SREBF1-216ENST00000490796 GRAMD1AQ96CP6 724 aa19.9■□□□□ 0.78
SREBF1-216ENST00000490796 LRRC61Q9BV99 259 aa19.9■□□□□ 0.78
SREBF1-216ENST00000490796 ATP13A3Q9H7F0 1226 aa19.9■□□□□ 0.78
SREBF1-216ENST00000490796 SP110Q9HB58 689 aa19.9■□□□□ 0.78
SREBF1-216ENST00000490796 PCDH12Q9NPG4 1184 aa19.9■□□□□ 0.78
SREBF1-216ENST00000490796 THSD1Q9NS62 852 aa19.9■□□□□ 0.78
SREBF1-216ENST00000490796 TAS2R14Q9NYV8 317 aa19.9■□□□□ 0.78
SREBF1-216ENST00000490796 GULP1Q9UBP9 304 aa19.9■□□□□ 0.78
SREBF1-216ENST00000490796 PCSK1NQ9UHG2 260 aa19.9■□□□□ 0.78
SREBF1-216ENST00000490796 COQ6Q9Y2Z9 468 aa19.9■□□□□ 0.78
SREBF1-216ENST00000490796 RAI2Q9Y5P3 530 aa19.9■□□□□ 0.78
SREBF1-216ENST00000490796 J3KR12 359 aa19.89■□□□□ 0.77
SREBF1-216ENST00000490796 PRPSAP2O60256 369 aa19.89■□□□□ 0.77
SREBF1-216ENST00000490796 GCATO75600 419 aa19.89■□□□□ 0.77
SREBF1-216ENST00000490796 RASGRP1O95267 797 aa19.89■□□□□ 0.77
SREBF1-216ENST00000490796 ALPIP09923 528 aa19.89■□□□□ 0.77
SREBF1-216ENST00000490796 C6P13671 934 aa19.89■□□□□ 0.77
SREBF1-216ENST00000490796 TSHRP16473 764 aa19.89■□□□□ 0.77
SREBF1-216ENST00000490796 SERPINA4P29622 427 aa19.89■□□□□ 0.77
SREBF1-216ENST00000490796 PAPOLAP51003 745 aaKnown RBP19.89■□□□□ 0.77
SREBF1-216ENST00000490796 OGDHQ02218 1023 aa19.89■□□□□ 0.77
SREBF1-216ENST00000490796 TYRO3Q06418 890 aa19.89■□□□□ 0.77
SREBF1-216ENST00000490796 MAMLD1Q13495 774 aa19.89■□□□□ 0.77
SREBF1-216ENST00000490796 ENPP7Q6UWV6 458 aa19.89■□□□□ 0.77
SREBF1-216ENST00000490796 GPR155Q7Z3F1 870 aa19.89■□□□□ 0.77
SREBF1-216ENST00000490796 RD3Q7Z3Z2 195 aa19.89■□□□□ 0.77
SREBF1-216ENST00000490796 SPACA3Q8IXA5 215 aa19.89■□□□□ 0.77
SREBF1-216ENST00000490796 WDR48Q8TAF3 677 aa19.89■□□□□ 0.77
SREBF1-216ENST00000490796 TUBGCP5Q96RT8 1024 aa19.89■□□□□ 0.77
SREBF1-216ENST00000490796 CINPQ9BW66 212 aaPredicted RBP19.89■□□□□ 0.77
SREBF1-216ENST00000490796 BOCQ9BWV1 1114 aa19.89■□□□□ 0.77
SREBF1-216ENST00000490796 LRRC19Q9H756 370 aa19.89■□□□□ 0.77
SREBF1-216ENST00000490796 PADI4Q9UM07 663 aa19.89■□□□□ 0.77
SREBF1-216ENST00000490796 LOC400499M0QZD8 3231 aa19.89■□□□□ 0.77
SREBF1-216ENST00000490796 SMTNL1A8MU46 457 aa19.88■□□□□ 0.77
SREBF1-216ENST00000490796 DFFAO00273 331 aa19.88■□□□□ 0.77
SREBF1-216ENST00000490796 YY2O15391 372 aa19.88■□□□□ 0.77
SREBF1-216ENST00000490796 ATMINO43313 823 aaPredicted RBP19.88■□□□□ 0.77
SREBF1-216ENST00000490796 LIG3P49916 1009 aa19.88■□□□□ 0.77
SREBF1-216ENST00000490796 ERVPABLB-1P60509 514 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms