RNA–Protein interactions for RNA: ENST00000490471.1

CDCP1-203, Transcript of CUB domain containing protein 1, humanhuman

TSL 4

Gene CDCP1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-203ENST00000490471 MACC1Q6ZN28 852 aa11.47□□□□□ -0.57
CDCP1-203ENST00000490471 PHACTR4Q8IZ21 702 aa11.47□□□□□ -0.57
CDCP1-203ENST00000490471 ZNF548Q8NEK5 533 aaPredicted RBP11.47□□□□□ -0.57
CDCP1-203ENST00000490471 OR6K2Q8NGY2 324 aa11.47□□□□□ -0.57
CDCP1-203ENST00000490471 IQCDQ96DY2 449 aa11.47□□□□□ -0.57
CDCP1-203ENST00000490471 PCDHB18PQ96TA0 734 aa11.47□□□□□ -0.57
CDCP1-203ENST00000490471 CINPQ9BW66 212 aaPredicted RBP11.47□□□□□ -0.57
CDCP1-203ENST00000490471 EDEM3Q9BZQ6 932 aa11.47□□□□□ -0.57
CDCP1-203ENST00000490471 DHX35Q9H5Z1 703 aaKnown RBP11.47□□□□□ -0.57
CDCP1-203ENST00000490471 POLR1BQ9H9Y6 1135 aa11.47□□□□□ -0.57
CDCP1-203ENST00000490471 UCKL1Q9NWZ5 548 aa11.47□□□□□ -0.57
CDCP1-203ENST00000490471 AP4E1Q9UPM8 1137 aa11.47□□□□□ -0.57
CDCP1-203ENST00000490471 TEX51A0A1B0GUA7 166 aa11.46□□□□□ -0.57
CDCP1-203ENST00000490471 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.46□□□□□ -0.57
CDCP1-203ENST00000490471 FAM170AA1A519 330 aa11.46□□□□□ -0.57
CDCP1-203ENST00000490471 FAM72CH0Y354 149 aa11.46□□□□□ -0.57
CDCP1-203ENST00000490471 CACNB4O00305 520 aaPredicted RBP11.46□□□□□ -0.57
CDCP1-203ENST00000490471 AREL1O15033 823 aa11.46□□□□□ -0.57
CDCP1-203ENST00000490471 MMP20O60882 483 aa11.46□□□□□ -0.57
CDCP1-203ENST00000490471 USP12O75317 370 aa11.46□□□□□ -0.57
CDCP1-203ENST00000490471 CD160O95971 181 aa11.46□□□□□ -0.57
CDCP1-203ENST00000490471 TNFP01375 233 aa11.46□□□□□ -0.57
CDCP1-203ENST00000490471 HSPA9P38646 679 aaKnown RBP11.46□□□□□ -0.57
CDCP1-203ENST00000490471 ABL2P42684 1182 aa11.46□□□□□ -0.57
CDCP1-203ENST00000490471 HCAR3P49019 387 aa11.46□□□□□ -0.57
CDCP1-203ENST00000490471 ADKP55263 362 aaKnown RBP11.46□□□□□ -0.57
CDCP1-203ENST00000490471 NSUN2Q08J23 767 aaKnown RBP eCLIP11.46□□□□□ -0.57
CDCP1-203ENST00000490471 PTP4A2Q12974 167 aa11.46□□□□□ -0.57
CDCP1-203ENST00000490471 UGP2Q16851 508 aa11.46□□□□□ -0.57
CDCP1-203ENST00000490471 TSR1Q2NL82 804 aaKnown RBP11.46□□□□□ -0.57
CDCP1-203ENST00000490471 ZNF542PQ5EBM4 170 aa11.46□□□□□ -0.57
CDCP1-203ENST00000490471 PRRT3Q5FWE3 981 aa11.46□□□□□ -0.57
CDCP1-203ENST00000490471 FAM72AQ5TYM5 149 aa11.46□□□□□ -0.57
CDCP1-203ENST00000490471 FAM72DQ6L9T8 149 aa11.46□□□□□ -0.57
CDCP1-203ENST00000490471 RBM44Q6ZP01 1051 aaKnown RBP11.46□□□□□ -0.57
CDCP1-203ENST00000490471 EFL1Q7Z2Z2 1120 aaKnown RBP11.46□□□□□ -0.57
CDCP1-203ENST00000490471 GPR155Q7Z3F1 870 aa11.46□□□□□ -0.57
CDCP1-203ENST00000490471 FAM72BQ86X60 149 aa11.46□□□□□ -0.57
CDCP1-203ENST00000490471 SLC22A18ASQ8N1D0 253 aa11.46□□□□□ -0.57
CDCP1-203ENST00000490471 ARL14Q8N4G2 192 aa11.46□□□□□ -0.57
CDCP1-203ENST00000490471 FNIP1Q8TF40 1166 aa11.46□□□□□ -0.57
CDCP1-203ENST00000490471 CENPTQ96BT3 561 aa11.46□□□□□ -0.57
CDCP1-203ENST00000490471 HMCESQ96FZ2 354 aa11.46□□□□□ -0.57
CDCP1-203ENST00000490471 BPIFA3Q9BQP9 254 aa11.46□□□□□ -0.57
CDCP1-203ENST00000490471 DPH1Q9BZG8 443 aa11.46□□□□□ -0.57
CDCP1-203ENST00000490471 STRADBQ9C0K7 418 aa11.46□□□□□ -0.57
CDCP1-203ENST00000490471 GPR27Q9NS67 375 aa11.46□□□□□ -0.57
CDCP1-203ENST00000490471 NDFIP2Q9NV92 336 aa11.46□□□□□ -0.57
CDCP1-203ENST00000490471 RALYQ9UKM9 306 aaKnown RBP11.46□□□□□ -0.57
CDCP1-203ENST00000490471 BZW2Q9Y6E2 419 aaKnown RBP11.46□□□□□ -0.57
CDCP1-203ENST00000490471 EPG5Q9HCE0 2579 aa11.46□□□□□ -0.58
CDCP1-203ENST00000490471 A0A1W2PQC6 194 aa11.45□□□□□ -0.58
CDCP1-203ENST00000490471 EME2A4GXA9 379 aaPredicted RBP11.45□□□□□ -0.58
CDCP1-203ENST00000490471 LMO7DNF2Z398 122 aa11.45□□□□□ -0.58
CDCP1-203ENST00000490471 H3BRJ5 948 aa11.45□□□□□ -0.58
CDCP1-203ENST00000490471 BRINP1O60477 761 aa11.45□□□□□ -0.58
CDCP1-203ENST00000490471 CSO75390 466 aaKnown RBP11.45□□□□□ -0.58
CDCP1-203ENST00000490471 SERPINC1P01008 464 aa11.45□□□□□ -0.58
CDCP1-203ENST00000490471 SERPINB6P35237 376 aa11.45□□□□□ -0.58
CDCP1-203ENST00000490471 TMPRSS3P57727 454 aa11.45□□□□□ -0.58
CDCP1-203ENST00000490471 GABREP78334 506 aa11.45□□□□□ -0.58
CDCP1-203ENST00000490471 IL10RBQ08334 325 aa11.45□□□□□ -0.58
CDCP1-203ENST00000490471 KLHL30Q0D2K2 578 aa11.45□□□□□ -0.58
CDCP1-203ENST00000490471 C19orf57Q0VDD7 668 aa11.45□□□□□ -0.58
CDCP1-203ENST00000490471 MTM1Q13496 603 aa11.45□□□□□ -0.58
CDCP1-203ENST00000490471 COL9A2Q14055 689 aaPredicted RBP11.45□□□□□ -0.58
CDCP1-203ENST00000490471 SPIDRQ14159 915 aa11.45□□□□□ -0.58
CDCP1-203ENST00000490471 CDKN3Q16667 212 aa11.45□□□□□ -0.58
CDCP1-203ENST00000490471 KLHL40Q2TBA0 621 aa11.45□□□□□ -0.58
CDCP1-203ENST00000490471 DEFB133Q30KQ1 61 aa11.45□□□□□ -0.58
CDCP1-203ENST00000490471 BOLA3Q53S33 107 aa11.45□□□□□ -0.58
CDCP1-203ENST00000490471 C6orf132Q5T0Z8 1188 aa11.45□□□□□ -0.58
CDCP1-203ENST00000490471 ATXN7L2Q5T6C5 722 aaPredicted RBP11.45□□□□□ -0.58
CDCP1-203ENST00000490471 LEKR1Q6ZMV7 388 aa11.45□□□□□ -0.58
CDCP1-203ENST00000490471 SRLQ86TD4 932 aa11.45□□□□□ -0.58
CDCP1-203ENST00000490471 MARCH9Q86YJ5 346 aa11.45□□□□□ -0.58
CDCP1-203ENST00000490471 AOPEPQ8N6M6 819 aa11.45□□□□□ -0.58
CDCP1-203ENST00000490471 ZNF599Q96NL3 588 aa11.45□□□□□ -0.58
CDCP1-203ENST00000490471 KLF6Q99612 283 aaPredicted RBP11.45□□□□□ -0.58
CDCP1-203ENST00000490471 TDRD6O60522 2096 aaKnown RBP11.44□□□□□ -0.58
CDCP1-203ENST00000490471 TMCO5BA8MYB1 307 aa11.44□□□□□ -0.58
CDCP1-203ENST00000490471 EPHB6O15197 1021 aa11.44□□□□□ -0.58
CDCP1-203ENST00000490471 RAD51BO15315 384 aa11.44□□□□□ -0.58
CDCP1-203ENST00000490471 PRAMEF11O60813 436 aa11.44□□□□□ -0.58
CDCP1-203ENST00000490471 NEBLO76041 1014 aa11.44□□□□□ -0.58
CDCP1-203ENST00000490471 DXOO77932 396 aaKnown RBP11.44□□□□□ -0.58
CDCP1-203ENST00000490471 GJB6O95452 261 aa11.44□□□□□ -0.58
CDCP1-203ENST00000490471 TIMP2P16035 220 aa11.44□□□□□ -0.58
CDCP1-203ENST00000490471 GKP32189 559 aa11.44□□□□□ -0.58
CDCP1-203ENST00000490471 AP1S1P61966 158 aa11.44□□□□□ -0.58
CDCP1-203ENST00000490471 RPL7AP62424 266 aaKnown RBP11.44□□□□□ -0.58
CDCP1-203ENST00000490471 TYRO3Q06418 890 aa11.44□□□□□ -0.58
CDCP1-203ENST00000490471 EIF3IQ13347 325 aaKnown RBP11.44□□□□□ -0.58
CDCP1-203ENST00000490471 MAMLD1Q13495 774 aa11.44□□□□□ -0.58
CDCP1-203ENST00000490471 FGL2Q14314 439 aa11.44□□□□□ -0.58
CDCP1-203ENST00000490471 AGERQ15109 404 aa11.44□□□□□ -0.58
CDCP1-203ENST00000490471 ISXQ2M1V0 245 aa11.44□□□□□ -0.58
CDCP1-203ENST00000490471 PPP6R3Q5H9R7 873 aaPredicted RBP11.44□□□□□ -0.58
CDCP1-203ENST00000490471 RALGPS1Q5JS13 557 aa11.44□□□□□ -0.58
CDCP1-203ENST00000490471 CDCP2Q5VXM1 449 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms