RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 KHDC1Q4VXA5 237 aaKnown RBP9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 ACSBG2Q5FVE4 666 aa9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 MS4A13Q5J8X5 152 aa9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 C10orf120Q5SQS8 335 aa9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 MARC1Q5VT66 337 aa9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 FAM171A1Q5VUB5 890 aa9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 METTL21CQ5VZV1 264 aa9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 RAP1GAP2Q684P5 730 aa9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 ZNF470Q6ECI4 717 aa9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 NEPROQ6NW34 567 aa9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 ESRP1Q6NXG1 681 aaKnown RBP9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 EPGNQ6UW88 154 aa9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 RANBP10Q6VN20 620 aa9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 FAM43BQ6ZT52 329 aaPredicted RBP9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 ACAD11Q709F0 780 aa9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 LRRC8DQ7L1W4 858 aa9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 TFAP2DQ7Z6R9 452 aa9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 SETD3Q86TU7 594 aaPredicted RBP9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 RTN4RL1Q86UN2 441 aaPredicted RBP9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 ZNF354CQ86Y25 554 aa9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 ZNF683Q8IZ20 524 aa9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 ZNF781Q8N8C0 355 aa9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 SLC43A3Q8NBI5 491 aa9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 ACVR1CQ8NER5 493 aa9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 SPPL2BQ8TCT7 592 aa9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 C2orf15Q8WU43 125 aaKnown RBP9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 KCTD4Q8WVF5 259 aa9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 ZNF419Q96HQ0 510 aaPredicted RBP9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 ZNF570Q96NI8 536 aa9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 ZIC5Q96T25 663 aa9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 COL25A1Q9BXS0 654 aaPredicted RBP9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 OXCT2Q9BYC2 517 aaPredicted RBP9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 NOL6Q9H6R4 1146 aaKnown RBP9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 ELAC1Q9H777 363 aaKnown RBP9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 ARNT2Q9HBZ2 717 aa9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 GPAMQ9HCL2 828 aa9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 ATP13A1Q9HD20 1204 aa9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 STARD7Q9NQZ5 370 aa9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 BATF3Q9NR55 127 aa9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 NDFIP2Q9NV92 336 aa9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 RNF186Q9NXI6 227 aa9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 MARCH2Q9P0N8 246 aa9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 CPSF2Q9P2I0 782 aaKnown RBP9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 XPR1Q9UBH6 696 aa9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 DNAJB4Q9UDY4 337 aa9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 SRRDQ9UH36 339 aa9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 FBXO5Q9UKT4 447 aa9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 RUVBL2Q9Y230 463 aaKnown RBP9.65□□□□□ -0.86
RAB3GAP1-205ENST00000489858 GOLGA8QA0A0J9YX86 632 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 A0A1W2PQ45 241 aaPredicted RBP9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 A0A1W2PQY0 241 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 SLC12A8A0AV02 714 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 GOLGA8OA6NCC3 632 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 GOLGA8NF8WBI6 632 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 SLC22A2O15244 555 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 HDAC3O15379 428 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 NVLO15381 856 aaKnown RBP9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 NPHS1O60500 1241 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 RAMP2O60895 175 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 PEX11BO96011 259 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 IGLV3-27P01718 113 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 AHSGP02765 367 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 SELPP16109 830 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 NCF2P19878 526 aaPredicted RBP9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 ATP6V1C1P21283 382 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 FGFR3P22607 806 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 MPSTP25325 297 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 ARRB2P32121 409 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 GCKP35557 465 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 SERPINB5P36952 375 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 CD86P42081 329 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 CHRNA4P43681 627 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 GRIA4P48058 902 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 PTDSS1P48651 473 aaKnown RBP9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 RING1Q06587 406 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 IL10RBQ08334 325 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 ITKQ08881 620 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 NOGQ13253 232 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 BFSP2Q13515 415 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 MRPL58Q14197 206 aaKnown RBP9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 NAA25Q14CX7 972 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 CNGA3Q16281 694 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 PSMD5Q16401 504 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 TSTD2Q5T7W7 516 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 SNX30Q5VWJ9 437 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 SEL1L3Q68CR1 1132 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 NAPRTQ6XQN6 538 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 RIPOR1Q6ZS17 1223 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 TMC7Q7Z402 723 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 GALNT7Q86SF2 657 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 DENND6AQ8IWF6 608 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 LMNTD2Q8IXW0 634 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 CENPLQ8N0S6 344 aaPredicted RBP9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 TMEM151AQ8N4L1 468 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 AFAP1L2Q8N4X5 818 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 SLC25A41Q8N5S1 370 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 TEX26Q8N6G2 289 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 GPATCH11Q8N954 259 aa9.64□□□□□ -0.87
RAB3GAP1-205ENST00000489858 PPFIBP2Q8ND30 876 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms