RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 IFT80Q9P2H3 777 aaPredicted RBP3.13□□□□□ -1.91
CPSF3-205ENST00000489629 hDV102S1A0JD36 115 aa3.12□□□□□ -1.91
CPSF3-205ENST00000489629 B9A039 149 aa3.12□□□□□ -1.91
CPSF3-205ENST00000489629 ZNF587BE7ETH6 402 aa3.12□□□□□ -1.91
CPSF3-205ENST00000489629 CHRM4P08173 479 aa3.12□□□□□ -1.91
CPSF3-205ENST00000489629 PIGAP37287 484 aa3.12□□□□□ -1.91
CPSF3-205ENST00000489629 ZNF132P52740 706 aa3.12□□□□□ -1.91
CPSF3-205ENST00000489629 CRIP2P52943 208 aaPredicted RBP3.12□□□□□ -1.91
CPSF3-205ENST00000489629 GOLGA8FQ08AF8 430 aa3.12□□□□□ -1.91
CPSF3-205ENST00000489629 ZBTB17Q13105 803 aa3.12□□□□□ -1.91
CPSF3-205ENST00000489629 OASLQ15646 514 aaKnown RBP3.12□□□□□ -1.91
CPSF3-205ENST00000489629 SOWAHAQ2M3V2 549 aa3.12□□□□□ -1.91
CPSF3-205ENST00000489629 CTXN3Q4LDR2 81 aa3.12□□□□□ -1.91
CPSF3-205ENST00000489629 PMS2CLQ68D20 193 aa3.12□□□□□ -1.91
CPSF3-205ENST00000489629 ADAM5Q6NVV9 412 aa3.12□□□□□ -1.91
CPSF3-205ENST00000489629 IL20RBQ6UXL0 311 aa3.12□□□□□ -1.91
CPSF3-205ENST00000489629 SPICE1Q8N0Z3 855 aa3.12□□□□□ -1.91
CPSF3-205ENST00000489629 DNAAF1Q8NEP3 725 aa3.12□□□□□ -1.91
CPSF3-205ENST00000489629 LNX1Q8TBB1 728 aaPredicted RBP3.12□□□□□ -1.91
CPSF3-205ENST00000489629 MTBPQ96DY7 904 aa3.12□□□□□ -1.91
CPSF3-205ENST00000489629 UHRF2Q96PU4 802 aa3.12□□□□□ -1.91
CPSF3-205ENST00000489629 OR1F2PQ96R84 312 aa3.12□□□□□ -1.91
CPSF3-205ENST00000489629 CSF3RQ99062 836 aa3.12□□□□□ -1.91
CPSF3-205ENST00000489629 LMAN2LQ9H0V9 348 aa3.12□□□□□ -1.91
CPSF3-205ENST00000489629 NOX4Q9NPH5 578 aa3.12□□□□□ -1.91
CPSF3-205ENST00000489629 CYSLTR2Q9NS75 346 aa3.12□□□□□ -1.91
CPSF3-205ENST00000489629 ZNF224Q9NZL3 707 aa3.12□□□□□ -1.91
CPSF3-205ENST00000489629 KIF17Q9P2E2 1029 aa3.12□□□□□ -1.91
CPSF3-205ENST00000489629 DNAJC16Q9Y2G8 782 aa3.12□□□□□ -1.91
CPSF3-205ENST00000489629 DAAM1Q9Y4D1 1078 aa3.12□□□□□ -1.91
CPSF3-205ENST00000489629 PCDHAC2Q9Y5I4 1007 aa3.12□□□□□ -1.91
CPSF3-205ENST00000489629 SNX9Q9Y5X1 595 aa3.12□□□□□ -1.91
CPSF3-205ENST00000489629 FAM90A7PA6NKC0 464 aa3.11□□□□□ -1.91
CPSF3-205ENST00000489629 FAM90A22PA8MWA6 464 aa3.11□□□□□ -1.91
CPSF3-205ENST00000489629 FAM90A12PA8MX19 464 aa3.11□□□□□ -1.91
CPSF3-205ENST00000489629 FAM90A23PA8MXZ1 464 aa3.11□□□□□ -1.91
CPSF3-205ENST00000489629 MID1O15344 667 aa3.11□□□□□ -1.91
CPSF3-205ENST00000489629 RGS11O94810 467 aa3.11□□□□□ -1.91
CPSF3-205ENST00000489629 TFPIP10646 304 aa3.11□□□□□ -1.91
CPSF3-205ENST00000489629 NLRP5P59047 1200 aa3.11□□□□□ -1.91
CPSF3-205ENST00000489629 ACTR2P61160 394 aa3.11□□□□□ -1.91
CPSF3-205ENST00000489629 POSTNQ15063 836 aa3.11□□□□□ -1.91
CPSF3-205ENST00000489629 EFNB3Q15768 340 aa3.11□□□□□ -1.91
CPSF3-205ENST00000489629 AMZ1Q400G9 498 aa3.11□□□□□ -1.91
CPSF3-205ENST00000489629 HIST2H2BCQ6DN03 193 aa3.11□□□□□ -1.91
CPSF3-205ENST00000489629 CCDC174Q6PII3 467 aa3.11□□□□□ -1.91
CPSF3-205ENST00000489629 ZC3HC1Q86WB0 502 aaKnown RBP3.11□□□□□ -1.91
CPSF3-205ENST00000489629 CHD1LQ86WJ1 897 aa3.11□□□□□ -1.91
CPSF3-205ENST00000489629 MAB21L3Q8N8X9 362 aa3.11□□□□□ -1.91
CPSF3-205ENST00000489629 CREB3L4Q8TEY5 395 aa3.11□□□□□ -1.91
CPSF3-205ENST00000489629 GDPD5Q8WTR4 605 aa3.11□□□□□ -1.91
CPSF3-205ENST00000489629 AFG1LQ8WV93 481 aa3.11□□□□□ -1.91
CPSF3-205ENST00000489629 TRAPPC12Q8WVT3 735 aa3.11□□□□□ -1.91
CPSF3-205ENST00000489629 RUBCNQ92622 972 aa3.11□□□□□ -1.91
CPSF3-205ENST00000489629 RILPL2Q969X0 211 aa3.11□□□□□ -1.91
CPSF3-205ENST00000489629 EPYCQ99645 322 aa3.11□□□□□ -1.91
CPSF3-205ENST00000489629 TAGLN3Q9UI15 199 aa3.11□□□□□ -1.91
CPSF3-205ENST00000489629 SIX4Q9UIU6 781 aa3.11□□□□□ -1.91
CPSF3-205ENST00000489629 CGNL1Q0VF96 1302 aa3.11□□□□□ -1.91
CPSF3-205ENST00000489629 NOTCH3Q9UM47 2321 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 A0A0U1RQF3 1178 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 C17orf113A0A1B0GUU1 675 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 KLRF2D3W0D1 207 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 ZIC3O60481 467 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 NDUFS7O75251 213 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 CFC1BP0CG36 223 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 CFC1P0CG37 223 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 SRCP12931 536 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 ZNF8P17098 575 aaPredicted RBP3.1□□□□□ -1.91
CPSF3-205ENST00000489629 BLKP51451 505 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 TNFAIP1Q13829 316 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 UBE4AQ14139 1066 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 TRIM14Q14142 442 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 MORC3Q14149 939 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 CCDC6Q16204 474 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 ESCO2Q56NI9 601 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 CEP85LQ5SZL2 805 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 C17orf99Q6UX52 265 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 GDPD4Q6W3E5 623 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 MOGAT3Q86VF5 341 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 CCDC146Q8IYE0 955 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 CIARTQ8N365 385 aaPredicted RBP3.1□□□□□ -1.91
CPSF3-205ENST00000489629 KBTBD3Q8NAB2 608 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 IL17RCQ8NAC3 791 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 SPPL3Q8TCT6 385 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 RAB40AQ8WXH6 277 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 FIG4Q92562 907 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 TANKQ92844 425 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 WBP2Q969T9 261 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 SH3KBP1Q96B97 665 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 LTV1Q96GA3 475 aaPredicted RBP3.1□□□□□ -1.91
CPSF3-205ENST00000489629 FEM1CQ96JP0 617 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 C3orf30Q96M34 536 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.1□□□□□ -1.91
CPSF3-205ENST00000489629 LRRC4Q9HBW1 653 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 RASSF1Q9NS23 344 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 FEM1BQ9UK73 627 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 ZNF711Q9Y462 761 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 NFE2L3Q9Y4A8 694 aa3.1□□□□□ -1.91
CPSF3-205ENST00000489629 TYW5A2RUC4 315 aaKnown RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms