RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 ATXN7L1Q9ULK2 861 aaPredicted RBP17.17■□□□□ 0.34
TOP3B-217ENST00000489581 COQ6Q9Y2Z9 468 aa17.17■□□□□ 0.34
TOP3B-217ENST00000489581 AGRPO00253 132 aa17.16■□□□□ 0.34
TOP3B-217ENST00000489581 TOR1BO14657 336 aa17.16■□□□□ 0.34
TOP3B-217ENST00000489581 BUB1O43683 1085 aa17.16■□□□□ 0.34
TOP3B-217ENST00000489581 KDELR3O43731 214 aa17.16■□□□□ 0.34
TOP3B-217ENST00000489581 RAMP2O60895 175 aa17.16■□□□□ 0.34
TOP3B-217ENST00000489581 TMCC1O94876 653 aa17.16■□□□□ 0.34
TOP3B-217ENST00000489581 LSM8O95777 96 aaKnown RBP17.16■□□□□ 0.34
TOP3B-217ENST00000489581 PRKCSHP14314 528 aaPredicted RBP17.16■□□□□ 0.34
TOP3B-217ENST00000489581 BLKP51451 505 aa17.16■□□□□ 0.34
TOP3B-217ENST00000489581 NOMO3P69849 1222 aa17.16■□□□□ 0.34
TOP3B-217ENST00000489581 RAD51Q06609 339 aa17.16■□□□□ 0.34
TOP3B-217ENST00000489581 ELOCQ15369 112 aa17.16■□□□□ 0.34
TOP3B-217ENST00000489581 ALG11Q2TAA5 492 aa17.16■□□□□ 0.34
TOP3B-217ENST00000489581 CCDC14Q49A88 953 aa17.16■□□□□ 0.34
TOP3B-217ENST00000489581 VWA3BQ502W6 1294 aa17.16■□□□□ 0.34
TOP3B-217ENST00000489581 MIIPQ5JXC2 388 aa17.16■□□□□ 0.34
TOP3B-217ENST00000489581 KLHDC7AQ5VTJ3 777 aa17.16■□□□□ 0.34
TOP3B-217ENST00000489581 ENPP7Q6UWV6 458 aa17.16■□□□□ 0.34
TOP3B-217ENST00000489581 NYAP1Q6ZVC0 841 aa17.16■□□□□ 0.34
TOP3B-217ENST00000489581 TBC1D31Q96DN5 1066 aa17.16■□□□□ 0.34
TOP3B-217ENST00000489581 GDAP1L1Q96MZ0 367 aa17.16■□□□□ 0.34
TOP3B-217ENST00000489581 CPEB1Q9BZB8 566 aaKnown RBP17.16■□□□□ 0.34
TOP3B-217ENST00000489581 EDEM3Q9BZQ6 932 aa17.16■□□□□ 0.34
TOP3B-217ENST00000489581 TTYH3Q9C0H2 523 aa17.16■□□□□ 0.34
TOP3B-217ENST00000489581 GPR34Q9UPC5 381 aa17.16■□□□□ 0.34
TOP3B-217ENST00000489581 NEU3Q9UQ49 428 aa17.16■□□□□ 0.34
TOP3B-217ENST00000489581 TLN1Q9Y490 2541 aaKnown RBP17.15■□□□□ 0.34
TOP3B-217ENST00000489581 A0A1W2PQM1 296 aa17.15■□□□□ 0.34
TOP3B-217ENST00000489581 D6RAR5 112 aa17.15■□□□□ 0.34
TOP3B-217ENST00000489581 ARHGAP6O43182 974 aa17.15■□□□□ 0.34
TOP3B-217ENST00000489581 GJB6O95452 261 aa17.15■□□□□ 0.34
TOP3B-217ENST00000489581 RPLP0P05388 317 aaKnown RBP17.15■□□□□ 0.34
TOP3B-217ENST00000489581 PLEKP08567 350 aaPredicted RBP17.15■□□□□ 0.34
TOP3B-217ENST00000489581 ALPIP09923 528 aa17.15■□□□□ 0.34
TOP3B-217ENST00000489581 INHBCP55103 352 aa17.15■□□□□ 0.34
TOP3B-217ENST00000489581 EIF3IQ13347 325 aaKnown RBP17.15■□□□□ 0.34
TOP3B-217ENST00000489581 LRRC14Q15048 493 aa17.15■□□□□ 0.34
TOP3B-217ENST00000489581 WSCD2Q2TBF2 565 aa17.15■□□□□ 0.34
TOP3B-217ENST00000489581 LINC00303Q3SY05 128 aa17.15■□□□□ 0.34
TOP3B-217ENST00000489581 HSP90AA4PQ58FG1 418 aa17.15■□□□□ 0.34
TOP3B-217ENST00000489581 LVRNQ6Q4G3 990 aa17.15■□□□□ 0.34
TOP3B-217ENST00000489581 USP53Q70EK8 1073 aa17.15■□□□□ 0.34
TOP3B-217ENST00000489581 JOSD2Q8TAC2 188 aa17.15■□□□□ 0.34
TOP3B-217ENST00000489581 GPT2Q8TD30 523 aa17.15■□□□□ 0.34
TOP3B-217ENST00000489581 STRADBQ9C0K7 418 aa17.15■□□□□ 0.34
TOP3B-217ENST00000489581 KLC2Q9H0B6 622 aa17.15■□□□□ 0.34
TOP3B-217ENST00000489581 RETREG1Q9H6L5 497 aa17.15■□□□□ 0.34
TOP3B-217ENST00000489581 PISDQ9UG56 409 aa17.15■□□□□ 0.34
TOP3B-217ENST00000489581 PCDHGA7Q9Y5G6 932 aa17.15■□□□□ 0.34
TOP3B-217ENST00000489581 HEMK1Q9Y5R4 338 aaPredicted RBP17.15■□□□□ 0.34
TOP3B-217ENST00000489581 BOD1L1Q8NFC6 3051 aa17.14■□□□□ 0.33
TOP3B-217ENST00000489581 TMX2-CTNND1H3BSU7 103 aa17.14■□□□□ 0.33
TOP3B-217ENST00000489581 PES1O00541 588 aaKnown RBP17.14■□□□□ 0.33
TOP3B-217ENST00000489581 INSIG1O15503 277 aa17.14■□□□□ 0.33
TOP3B-217ENST00000489581 NOBOXO60393 691 aa17.14■□□□□ 0.33
TOP3B-217ENST00000489581 RASGRP1O95267 797 aa17.14■□□□□ 0.33
TOP3B-217ENST00000489581 IGSF6O95976 241 aa17.14■□□□□ 0.33
TOP3B-217ENST00000489581 XPAP23025 273 aaPredicted RBP17.14■□□□□ 0.33
TOP3B-217ENST00000489581 SDC4P31431 198 aa17.14■□□□□ 0.33
TOP3B-217ENST00000489581 PEX5P50542 639 aa17.14■□□□□ 0.33
TOP3B-217ENST00000489581 RHOAP61586 193 aa17.14■□□□□ 0.33
TOP3B-217ENST00000489581 TMEM52BQ4KMG9 183 aa17.14■□□□□ 0.33
TOP3B-217ENST00000489581 CCDC185Q8N715 623 aa17.14■□□□□ 0.33
TOP3B-217ENST00000489581 EXTL1Q92935 676 aa17.14■□□□□ 0.33
TOP3B-217ENST00000489581 TUBGCP2Q9BSJ2 902 aa17.14■□□□□ 0.33
TOP3B-217ENST00000489581 APOOQ9BUR5 198 aa17.14■□□□□ 0.33
TOP3B-217ENST00000489581 NAA15Q9BXJ9 866 aaKnown RBP17.14■□□□□ 0.33
TOP3B-217ENST00000489581 TRIM4Q9C037 500 aa17.14■□□□□ 0.33
TOP3B-217ENST00000489581 FAM117AQ9C073 453 aa17.14■□□□□ 0.33
TOP3B-217ENST00000489581 LRRN3Q9H3W5 708 aa17.14■□□□□ 0.33
TOP3B-217ENST00000489581 NOL6Q9H6R4 1146 aaKnown RBP17.14■□□□□ 0.33
TOP3B-217ENST00000489581 DKK3Q9UBP4 350 aa17.14■□□□□ 0.33
TOP3B-217ENST00000489581 OR1A2Q9Y585 309 aa17.14■□□□□ 0.33
TOP3B-217ENST00000489581 ZSCAN5CA6NGD5 496 aaPredicted RBP17.13■□□□□ 0.33
TOP3B-217ENST00000489581 TMEM110-MUSTN1A8MSY1 372 aa17.13■□□□□ 0.33
TOP3B-217ENST00000489581 PIGNO95427 931 aa17.13■□□□□ 0.33
TOP3B-217ENST00000489581 JMJD7P0C870 316 aa17.13■□□□□ 0.33
TOP3B-217ENST00000489581 UCHL3P15374 230 aa17.13■□□□□ 0.33
TOP3B-217ENST00000489581 HTR1BP28222 390 aa17.13■□□□□ 0.33
TOP3B-217ENST00000489581 SRP54P61011 504 aaKnown RBP17.13■□□□□ 0.33
TOP3B-217ENST00000489581 BECN1Q14457 450 aa17.13■□□□□ 0.33
TOP3B-217ENST00000489581 INPP5AQ14642 412 aa17.13■□□□□ 0.33
TOP3B-217ENST00000489581 KCTD16Q68DU8 428 aa17.13■□□□□ 0.33
TOP3B-217ENST00000489581 GKN2Q86XP6 184 aa17.13■□□□□ 0.33
TOP3B-217ENST00000489581 FAM114A1Q8IWE2 563 aa17.13■□□□□ 0.33
TOP3B-217ENST00000489581 PYROXD2Q8N2H3 581 aa17.13■□□□□ 0.33
TOP3B-217ENST00000489581 Q8N9G6 341 aaPredicted RBP17.13■□□□□ 0.33
TOP3B-217ENST00000489581 EPS8L1Q8TE68 723 aa17.13■□□□□ 0.33
TOP3B-217ENST00000489581 SLC20A1Q8WUM9 679 aa17.13■□□□□ 0.33
TOP3B-217ENST00000489581 SGF29Q96ES7 293 aa17.13■□□□□ 0.33
TOP3B-217ENST00000489581 EXOC2Q96KP1 924 aa17.13■□□□□ 0.33
TOP3B-217ENST00000489581 TMEM74Q96NL1 305 aa17.13■□□□□ 0.33
TOP3B-217ENST00000489581 ARHGAP9Q9BRR9 750 aa17.13■□□□□ 0.33
TOP3B-217ENST00000489581 KLQ9UEF7 1012 aa17.13■□□□□ 0.33
TOP3B-217ENST00000489581 MFHAS1Q9Y4C4 1052 aa17.13■□□□□ 0.33
TOP3B-217ENST00000489581 PTPN13Q12923 2485 aa17.13■□□□□ 0.33
TOP3B-217ENST00000489581 DOPEY2Q9Y3R5 2298 aa17.12■□□□□ 0.33
TOP3B-217ENST00000489581 C2CD4BA6NLJ0 364 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms