RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 FAM174AQ8TBP5 190 aa17.51■□□□□ 0.39
MDC1-206ENST00000489540 KLK6Q92876 244 aa17.51■□□□□ 0.39
MDC1-206ENST00000489540 ECHDC3Q96DC8 303 aa17.51■□□□□ 0.39
MDC1-206ENST00000489540 GRPEL1Q9HAV7 217 aa17.51■□□□□ 0.39
MDC1-206ENST00000489540 RBM22Q9NW64 420 aaKnown RBP eCLIP17.51■□□□□ 0.39
MDC1-206ENST00000489540 PCDHA3Q9Y5H8 950 aa17.51■□□□□ 0.39
MDC1-206ENST00000489540 SNX11Q9Y5W9 270 aa17.51■□□□□ 0.39
MDC1-206ENST00000489540 HS3ST3A1Q9Y663 406 aa17.51■□□□□ 0.39
MDC1-206ENST00000489540 CCDC66A2RUB6 948 aa17.5■□□□□ 0.39
MDC1-206ENST00000489540 GOLGA6L3A6NEY3 463 aa17.5■□□□□ 0.39
MDC1-206ENST00000489540 IGLON5A6NGN9 336 aa17.5■□□□□ 0.39
MDC1-206ENST00000489540 TRAFD1O14545 582 aaPredicted RBP17.5■□□□□ 0.39
MDC1-206ENST00000489540 SOCS5O75159 536 aa17.5■□□□□ 0.39
MDC1-206ENST00000489540 GJB3O75712 270 aa17.5■□□□□ 0.39
MDC1-206ENST00000489540 NEBLO76041 1014 aa17.5■□□□□ 0.39
MDC1-206ENST00000489540 PAK4O96013 591 aaPredicted RBP17.5■□□□□ 0.39
MDC1-206ENST00000489540 ZNF883P0CG24 379 aa17.5■□□□□ 0.39
MDC1-206ENST00000489540 PRLRP16471 622 aa17.5■□□□□ 0.39
MDC1-206ENST00000489540 CTNNA1P35221 906 aaKnown RBP17.5■□□□□ 0.39
MDC1-206ENST00000489540 PPIDQ08752 370 aaKnown RBP17.5■□□□□ 0.39
MDC1-206ENST00000489540 TMEM52BQ4KMG9 183 aa17.5■□□□□ 0.39
MDC1-206ENST00000489540 LAYNQ6UX15 382 aa17.5■□□□□ 0.39
MDC1-206ENST00000489540 ERMP1Q7Z2K6 904 aa17.5■□□□□ 0.39
MDC1-206ENST00000489540 SYCE1Q8N0S2 351 aa17.5■□□□□ 0.39
MDC1-206ENST00000489540 LRRC57Q8N9N7 239 aa17.5■□□□□ 0.39
MDC1-206ENST00000489540 TMEM145Q8NBT3 493 aa17.5■□□□□ 0.39
MDC1-206ENST00000489540 OR2I1PQ8NGU4 316 aa17.5■□□□□ 0.39
MDC1-206ENST00000489540 CXorf40AQ8TE69 158 aa17.5■□□□□ 0.39
MDC1-206ENST00000489540 SPOCK2Q92563 424 aa17.5■□□□□ 0.39
MDC1-206ENST00000489540 LENG8Q96PV6 779 aaPredicted RBP17.5■□□□□ 0.39
MDC1-206ENST00000489540 POLR1EQ9GZS1 481 aaKnown RBP17.5■□□□□ 0.39
MDC1-206ENST00000489540 NOD2Q9HC29 1040 aa17.5■□□□□ 0.39
MDC1-206ENST00000489540 NT5MQ9NPB1 228 aa17.5■□□□□ 0.39
MDC1-206ENST00000489540 ITM2BQ9Y287 266 aa17.5■□□□□ 0.39
MDC1-206ENST00000489540 CEP192Q8TEP8 1941 aa17.5■□□□□ 0.39
MDC1-206ENST00000489540 MACROD2A1Z1Q3 448 aa17.49■□□□□ 0.39
MDC1-206ENST00000489540 RIOK3O14730 519 aaKnown RBP17.49■□□□□ 0.39
MDC1-206ENST00000489540 PPP1R12AO14974 1030 aaPredicted RBP17.49■□□□□ 0.39
MDC1-206ENST00000489540 SPINT1O43278 529 aa17.49■□□□□ 0.39
MDC1-206ENST00000489540 HTRA2O43464 458 aaPredicted RBP17.49■□□□□ 0.39
MDC1-206ENST00000489540 COPS2P61201 443 aa17.49■□□□□ 0.39
MDC1-206ENST00000489540 MAXP61244 160 aa17.49■□□□□ 0.39
MDC1-206ENST00000489540 DYNLT1P63172 113 aa17.49■□□□□ 0.39
MDC1-206ENST00000489540 ITKQ08881 620 aa17.49■□□□□ 0.39
MDC1-206ENST00000489540 KAZNQ674X7 775 aa17.49■□□□□ 0.39
MDC1-206ENST00000489540 CCDC50Q8IVM0 306 aa17.49■□□□□ 0.39
MDC1-206ENST00000489540 LRRC8AQ8IWT6 810 aa17.49■□□□□ 0.39
MDC1-206ENST00000489540 RNF10Q8N5U6 811 aaKnown RBP17.49■□□□□ 0.39
MDC1-206ENST00000489540 KRT35Q92764 455 aa17.49■□□□□ 0.39
MDC1-206ENST00000489540 KLHDC7BQ96G42 594 aa17.49■□□□□ 0.39
MDC1-206ENST00000489540 LGMNQ99538 433 aa17.49■□□□□ 0.39
MDC1-206ENST00000489540 TSGA10Q9BZW7 698 aa17.49■□□□□ 0.39
MDC1-206ENST00000489540 PCDH12Q9NPG4 1184 aa17.49■□□□□ 0.39
MDC1-206ENST00000489540 GDF3Q9NR23 364 aa17.49■□□□□ 0.39
MDC1-206ENST00000489540 GGT7Q9UJ14 662 aa17.49■□□□□ 0.39
MDC1-206ENST00000489540 ATP8A1Q9Y2Q0 1164 aa17.49■□□□□ 0.39
MDC1-206ENST00000489540 ADGRG1Q9Y653 693 aa17.49■□□□□ 0.39
MDC1-206ENST00000489540 PI4KAP42356 2102 aa17.48■□□□□ 0.39
MDC1-206ENST00000489540 TTC24A2A3L6 582 aaPredicted RBP17.48■□□□□ 0.39
MDC1-206ENST00000489540 GRID2IPA4D2P6 1211 aa17.48■□□□□ 0.39
MDC1-206ENST00000489540 NRDCO43847 1150 aa17.48■□□□□ 0.39
MDC1-206ENST00000489540 CST8O60676 142 aa17.48■□□□□ 0.39
MDC1-206ENST00000489540 MMP20O60882 483 aa17.48■□□□□ 0.39
MDC1-206ENST00000489540 KRT10P13645 584 aa17.48■□□□□ 0.39
MDC1-206ENST00000489540 CSRP1P21291 193 aaKnown RBP17.48■□□□□ 0.39
MDC1-206ENST00000489540 TGM2P21980 687 aa17.48■□□□□ 0.39
MDC1-206ENST00000489540 NFKBIAP25963 317 aa17.48■□□□□ 0.39
MDC1-206ENST00000489540 CTNNA2P26232 953 aa17.48■□□□□ 0.39
MDC1-206ENST00000489540 CETN2P41208 172 aa17.48■□□□□ 0.39
MDC1-206ENST00000489540 MARCKSL1P49006 195 aa17.48■□□□□ 0.39
MDC1-206ENST00000489540 RWDD2BP57060 319 aa17.48■□□□□ 0.39
MDC1-206ENST00000489540 NXPH1P58417 271 aa17.48■□□□□ 0.39
MDC1-206ENST00000489540 FGL2Q14314 439 aa17.48■□□□□ 0.39
MDC1-206ENST00000489540 SUZ12Q15022 739 aaKnown RBP17.48■□□□□ 0.39
MDC1-206ENST00000489540 PPP2R5EQ16537 467 aa17.48■□□□□ 0.39
MDC1-206ENST00000489540 ZNF423Q2M1K9 1284 aa17.48■□□□□ 0.39
MDC1-206ENST00000489540 LRRC73Q5JTD7 316 aa17.48■□□□□ 0.39
MDC1-206ENST00000489540 ALG1LQ6GMV1 187 aa17.48■□□□□ 0.39
MDC1-206ENST00000489540 ZSWIM9Q86XI8 627 aa17.48■□□□□ 0.39
MDC1-206ENST00000489540 NSMCE3Q96MG7 304 aa17.48■□□□□ 0.39
MDC1-206ENST00000489540 OLFM3Q96PB7 478 aa17.48■□□□□ 0.39
MDC1-206ENST00000489540 SEMA3CQ99985 751 aa17.48■□□□□ 0.39
MDC1-206ENST00000489540 C1QTNF7Q9BXJ2 289 aa17.48■□□□□ 0.39
MDC1-206ENST00000489540 SLC32A1Q9H598 525 aa17.48■□□□□ 0.39
MDC1-206ENST00000489540 ERVMER34-1Q9H9K5 563 aa17.48■□□□□ 0.39
MDC1-206ENST00000489540 IL21RQ9HBE5 538 aa17.48■□□□□ 0.39
MDC1-206ENST00000489540 AMFRQ9UKV5 643 aa17.48■□□□□ 0.39
MDC1-206ENST00000489540 PCDHGC4Q9Y5F7 938 aa17.48■□□□□ 0.39
MDC1-206ENST00000489540 PCDHGB2Q9Y5G2 931 aa17.48■□□□□ 0.39
MDC1-206ENST00000489540 hCG_1818297A0A087WSY0 165 aa17.47■□□□□ 0.39
MDC1-206ENST00000489540 CFAP69A5D8W1 941 aa17.47■□□□□ 0.39
MDC1-206ENST00000489540 TM7SF2O76062 418 aa17.47■□□□□ 0.39
MDC1-206ENST00000489540 JCHAINP01591 159 aa17.47■□□□□ 0.39
MDC1-206ENST00000489540 CD59P13987 128 aa17.47■□□□□ 0.39
MDC1-206ENST00000489540 ITIH2P19823 946 aa17.47■□□□□ 0.39
MDC1-206ENST00000489540 IFI35P80217 286 aaPredicted RBP17.47■□□□□ 0.39
MDC1-206ENST00000489540 AP1B1Q10567 949 aa17.47■□□□□ 0.39
MDC1-206ENST00000489540 NPNTQ6UXI9 565 aa17.47■□□□□ 0.39
MDC1-206ENST00000489540 PEX26Q7Z412 305 aa17.47■□□□□ 0.39
MDC1-206ENST00000489540 NT5DC3Q86UY8 548 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms