RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 BLOC1S3Q6QNY0 202 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 HS2ST1Q7LGA3 356 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 SYVN1Q86TM6 617 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 DMRTC2Q8IXT2 367 aaPredicted RBP7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 RNF214Q8ND24 703 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 ADAMTS17Q8TE56 1095 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 ADAMTS18Q8TE60 1221 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 CT55Q8WUE5 264 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 STAMBPL1Q96FJ0 436 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 USP28Q96RU2 1077 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 PPP1R9BQ96SB3 815 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 RUFY1Q96T51 708 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 POLDIP3Q9BY77 421 aaKnown RBP7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 SLC17A9Q9BYT1 436 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 VPS54Q9P1Q0 977 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 PDP2Q9P2J9 529 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 ADGRE2Q9UHX3 823 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 SLCO3A1Q9UIG8 710 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 SH3BGRL2Q9UJC5 107 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 INTS6Q9UL03 887 aaKnown RBP7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 DRGXA6NNA5 263 aa7.59□□□□□ -1.19
EXOSC3-206ENST00000489414 CLDN5O00501 218 aa7.59□□□□□ -1.19
EXOSC3-206ENST00000489414 POLR1CO15160 346 aaPredicted RBP7.59□□□□□ -1.19
EXOSC3-206ENST00000489414 SLC16A4O15374 487 aa7.59□□□□□ -1.19
EXOSC3-206ENST00000489414 PTMAP06454 111 aaKnown RBP7.59□□□□□ -1.19
EXOSC3-206ENST00000489414 CD19P15391 556 aa7.59□□□□□ -1.19
EXOSC3-206ENST00000489414 BLKP51451 505 aa7.59□□□□□ -1.19
EXOSC3-206ENST00000489414 SLC12A3P55017 1021 aa7.59□□□□□ -1.19
EXOSC3-206ENST00000489414 RPS18P62269 152 aaKnown RBP7.59□□□□□ -1.19
EXOSC3-206ENST00000489414 NKX6-1P78426 367 aaPredicted RBP7.59□□□□□ -1.19
EXOSC3-206ENST00000489414 NRG1Q02297 640 aaPredicted RBP7.59□□□□□ -1.19
EXOSC3-206ENST00000489414 SYCP1Q15431 976 aa7.59□□□□□ -1.19
EXOSC3-206ENST00000489414 NTRK3Q16288 839 aa7.59□□□□□ -1.19
EXOSC3-206ENST00000489414 C10orf120Q5SQS8 335 aa7.59□□□□□ -1.19
EXOSC3-206ENST00000489414 SCARA3Q6AZY7 606 aa7.59□□□□□ -1.19
EXOSC3-206ENST00000489414 ADALQ6DHV7 355 aa7.59□□□□□ -1.19
EXOSC3-206ENST00000489414 CRELD2Q6UXH1 353 aaPredicted RBP7.59□□□□□ -1.19
EXOSC3-206ENST00000489414 MACC1Q6ZN28 852 aa7.59□□□□□ -1.19
EXOSC3-206ENST00000489414 ACOT1Q86TX2 421 aa7.59□□□□□ -1.19
EXOSC3-206ENST00000489414 DAW1Q8N136 415 aa7.59□□□□□ -1.19
EXOSC3-206ENST00000489414 ZADH2Q8N4Q0 377 aa7.59□□□□□ -1.19
EXOSC3-206ENST00000489414 ATP11CQ8NB49 1132 aa7.59□□□□□ -1.19
EXOSC3-206ENST00000489414 LINC00301Q8NCQ3 95 aa7.59□□□□□ -1.19
EXOSC3-206ENST00000489414 NACC2Q96BF6 587 aa7.59□□□□□ -1.19
EXOSC3-206ENST00000489414 RNF31Q96EP0 1072 aa7.59□□□□□ -1.19
EXOSC3-206ENST00000489414 LENG8Q96PV6 779 aaPredicted RBP7.59□□□□□ -1.19
EXOSC3-206ENST00000489414 TRIM56Q9BRZ2 755 aaKnown RBP7.59□□□□□ -1.19
EXOSC3-206ENST00000489414 ADAM19Q9H013 955 aa7.59□□□□□ -1.19
EXOSC3-206ENST00000489414 FOXP1Q9H334 677 aaPredicted RBP7.59□□□□□ -1.19
EXOSC3-206ENST00000489414 ZDHHC6Q9H6R6 413 aa7.59□□□□□ -1.19
EXOSC3-206ENST00000489414 NPDC1Q9NQX5 325 aaPredicted RBP7.59□□□□□ -1.19
EXOSC3-206ENST00000489414 STMN3Q9NZ72 180 aa7.59□□□□□ -1.19
EXOSC3-206ENST00000489414 CCDC39Q9UFE4 941 aa7.59□□□□□ -1.19
EXOSC3-206ENST00000489414 PCDHA4Q9UN74 947 aa7.59□□□□□ -1.19
EXOSC3-206ENST00000489414 CSAG2Q9Y5P2 127 aa7.59□□□□□ -1.19
EXOSC3-206ENST00000489414 C1QTNF3-AMACRE9PGA6 284 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 ST8SIA5O15466 376 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 CREB3O43889 395 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 TACC1O75410 805 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 SLCO2B1O94956 709 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 PCDH8O95206 1070 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 RAF1P04049 648 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 ALPPP05187 535 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 PLEKP08567 350 aaPredicted RBP7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 PDGFRBP09619 1106 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 CTSEP14091 401 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 BMP6P22004 513 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 MSNP26038 577 aaKnown RBP7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 CFPP27918 469 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 MSX1P28360 303 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 PTPN4P29074 926 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 SGSHP51688 502 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 NDST2P52849 883 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 COG7P83436 770 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 TYRO3Q06418 890 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 CAMK4Q16566 473 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 RILPL1Q5EBL4 403 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 NKAIN2Q5VXU1 208 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 FAM180AQ6UWF9 173 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 TMEM207Q6UWW9 146 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 GFRALQ6UXV0 394 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 DPH6Q7L8W6 267 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 ARHGAP22Q7Z5H3 698 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 LRRC52Q8N7C0 313 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 BCORP1Q8N888 145 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 TMEM102Q8N9M5 508 aaPredicted RBP7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 CXorf38Q8TB03 319 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 TM9SF4Q92544 642 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 LARP4BQ92615 738 aaKnown RBP7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 CCDC34Q96HJ3 373 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 DPYSL5Q9BPU6 564 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 PRR14Q9BWN1 585 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 GPR87Q9BY21 358 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 NAT10Q9H0A0 1025 aaKnown RBP7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 BRD8Q9H0E9 1235 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 FBXO44Q9H4M3 255 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 NMUR1Q9HB89 426 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 NEUROD4Q9HD90 331 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 TUFT1Q9NNX1 390 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms