RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 CROTQ9UKG9 612 aa15.21■□□□□ 0.03
UFD1-209ENST00000489406 LRP4O75096 1905 aa15.21■□□□□ 0.02
UFD1-209ENST00000489406 DCHS2Q6V1P9 2916 aa15.2■□□□□ 0.02
UFD1-209ENST00000489406 PIPSLA2A3N6 862 aa15.2■□□□□ 0.02
UFD1-209ENST00000489406 ZW10O43264 779 aa15.2■□□□□ 0.02
UFD1-209ENST00000489406 LRCH4O75427 683 aa15.2■□□□□ 0.02
UFD1-209ENST00000489406 ZNF821O75541 412 aaPredicted RBP15.2■□□□□ 0.02
UFD1-209ENST00000489406 DLGAP3O95886 979 aa15.2■□□□□ 0.02
UFD1-209ENST00000489406 SETSIPP0DME0 302 aa15.2■□□□□ 0.02
UFD1-209ENST00000489406 CD19P15391 556 aa15.2■□□□□ 0.02
UFD1-209ENST00000489406 CSF2RBP32927 897 aa15.2■□□□□ 0.02
UFD1-209ENST00000489406 MAN1A1P33908 653 aa15.2■□□□□ 0.02
UFD1-209ENST00000489406 GCLMP48507 274 aa15.2■□□□□ 0.02
UFD1-209ENST00000489406 CHAF1BQ13112 559 aa15.2■□□□□ 0.02
UFD1-209ENST00000489406 KNOP1Q1ED39 458 aaKnown RBP15.2■□□□□ 0.02
UFD1-209ENST00000489406 FOXR2Q6PJQ5 311 aa15.2■□□□□ 0.02
UFD1-209ENST00000489406 IRF2BP1Q8IU81 584 aa15.2■□□□□ 0.02
UFD1-209ENST00000489406 TTC39CQ8N584 583 aa15.2■□□□□ 0.02
UFD1-209ENST00000489406 ATP6V0D2Q8N8Y2 350 aa15.2■□□□□ 0.02
UFD1-209ENST00000489406 CCDC150Q8NCX0 1101 aa15.2■□□□□ 0.02
UFD1-209ENST00000489406 CCL4L1Q8NHW4 92 aa15.2■□□□□ 0.02
UFD1-209ENST00000489406 ZPBPQ9BS86 351 aa15.2■□□□□ 0.02
UFD1-209ENST00000489406 C2orf49Q9BVC5 232 aaPredicted RBP15.2■□□□□ 0.02
UFD1-209ENST00000489406 MIS12Q9H081 205 aa15.2■□□□□ 0.02
UFD1-209ENST00000489406 MMRN2Q9H8L6 949 aa15.2■□□□□ 0.02
UFD1-209ENST00000489406 MLXIPLQ9NP71 852 aa15.2■□□□□ 0.02
UFD1-209ENST00000489406 OR1A2Q9Y585 309 aa15.2■□□□□ 0.02
UFD1-209ENST00000489406 PCDHGA9Q9Y5G4 932 aaKnown RBP15.2■□□□□ 0.02
UFD1-209ENST00000489406 A8MU76 341 aa15.19■□□□□ 0.02
UFD1-209ENST00000489406 LRRTM2O43300 516 aa15.19■□□□□ 0.02
UFD1-209ENST00000489406 CCL11P51671 97 aa15.19■□□□□ 0.02
UFD1-209ENST00000489406 CLCN6P51797 869 aa15.19■□□□□ 0.02
UFD1-209ENST00000489406 CCNHP51946 323 aaPredicted RBP15.19■□□□□ 0.02
UFD1-209ENST00000489406 LRRC73Q5JTD7 316 aa15.19■□□□□ 0.02
UFD1-209ENST00000489406 SNAP47Q5SQN1 464 aa15.19■□□□□ 0.02
UFD1-209ENST00000489406 SYPL2Q5VXT5 272 aa15.19■□□□□ 0.02
UFD1-209ENST00000489406 CPZQ66K79 652 aa15.19■□□□□ 0.02
UFD1-209ENST00000489406 SLC6A19Q695T7 634 aa15.19■□□□□ 0.02
UFD1-209ENST00000489406 PMF1Q6P1K2 205 aa15.19■□□□□ 0.02
UFD1-209ENST00000489406 PDILTQ8N807 584 aa15.19■□□□□ 0.02
UFD1-209ENST00000489406 OR1E3Q8WZA6 343 aa15.19■□□□□ 0.02
UFD1-209ENST00000489406 ZSCAN31Q96LW9 406 aaPredicted RBP15.19■□□□□ 0.02
UFD1-209ENST00000489406 WDR92Q96MX6 357 aa15.19■□□□□ 0.02
UFD1-209ENST00000489406 APOOQ9BUR5 198 aa15.19■□□□□ 0.02
UFD1-209ENST00000489406 ZMYND15Q9H091 742 aa15.19■□□□□ 0.02
UFD1-209ENST00000489406 TMEM168Q9H0V1 697 aa15.19■□□□□ 0.02
UFD1-209ENST00000489406 ZDHHC6Q9H6R6 413 aa15.19■□□□□ 0.02
UFD1-209ENST00000489406 FBXO2Q9UK22 296 aaPredicted RBP15.19■□□□□ 0.02
UFD1-209ENST00000489406 ZG16O60844 167 aa15.18■□□□□ 0.02
UFD1-209ENST00000489406 SNRPB2P08579 225 aaKnown RBP15.18■□□□□ 0.02
UFD1-209ENST00000489406 ITGA3P26006 1051 aa15.18■□□□□ 0.02
UFD1-209ENST00000489406 GKP32189 559 aa15.18■□□□□ 0.02
UFD1-209ENST00000489406 PER3P56645 1201 aa15.18■□□□□ 0.02
UFD1-209ENST00000489406 BIRC2Q13490 618 aa15.18■□□□□ 0.02
UFD1-209ENST00000489406 NR1D2Q14995 579 aa15.18■□□□□ 0.02
UFD1-209ENST00000489406 CISD2Q8N5K1 135 aaKnown RBP15.18■□□□□ 0.02
UFD1-209ENST00000489406 ATL2Q8NHH9 583 aa15.18■□□□□ 0.02
UFD1-209ENST00000489406 KIAA1524Q8TCG1 905 aa15.18■□□□□ 0.02
UFD1-209ENST00000489406 SLC39A2Q9NP94 309 aa15.18■□□□□ 0.02
UFD1-209ENST00000489406 FBXO8Q9NRD0 319 aa15.18■□□□□ 0.02
UFD1-209ENST00000489406 LATS2Q9NRM7 1088 aa15.18■□□□□ 0.02
UFD1-209ENST00000489406 SPATS2LQ9NUQ6 558 aaKnown RBP15.18■□□□□ 0.02
UFD1-209ENST00000489406 DMAC2Q9NW81 257 aa15.18■□□□□ 0.02
UFD1-209ENST00000489406 SLC12A6Q9UHW9 1150 aa15.18■□□□□ 0.02
UFD1-209ENST00000489406 VANGL2Q9ULK5 521 aa15.18■□□□□ 0.02
UFD1-209ENST00000489406 TBC1D30Q9Y2I9 924 aa15.18■□□□□ 0.02
UFD1-209ENST00000489406 DGKBQ9Y6T7 804 aa15.18■□□□□ 0.02
UFD1-209ENST00000489406 CHD5Q8TDI0 1954 aa15.18■□□□□ 0.02
UFD1-209ENST00000489406 IGHV1OR21-1A0A087WYE8 117 aa15.17■□□□□ 0.02
UFD1-209ENST00000489406 DPM1O60762 260 aa15.17■□□□□ 0.02
UFD1-209ENST00000489406 CREG1O75629 220 aa15.17■□□□□ 0.02
UFD1-209ENST00000489406 RHOCP08134 193 aa15.17■□□□□ 0.02
UFD1-209ENST00000489406 NFKBIAP25963 317 aa15.17■□□□□ 0.02
UFD1-209ENST00000489406 CLCN1P35523 988 aa15.17■□□□□ 0.02
UFD1-209ENST00000489406 DNM1Q05193 864 aaKnown RBP15.17■□□□□ 0.02
UFD1-209ENST00000489406 CDK18Q07002 472 aa15.17■□□□□ 0.02
UFD1-209ENST00000489406 PPP3CAQ08209 521 aa15.17■□□□□ 0.02
UFD1-209ENST00000489406 MAP7Q14244 749 aa15.17■□□□□ 0.02
UFD1-209ENST00000489406 INPP5AQ14642 412 aa15.17■□□□□ 0.02
UFD1-209ENST00000489406 LRRC14Q15048 493 aa15.17■□□□□ 0.02
UFD1-209ENST00000489406 WSCD2Q2TBF2 565 aa15.17■□□□□ 0.02
UFD1-209ENST00000489406 CARD16Q5EG05 197 aa15.17■□□□□ 0.02
UFD1-209ENST00000489406 PAPD7Q5XG87 772 aaKnown RBP15.17■□□□□ 0.02
UFD1-209ENST00000489406 TMEM71Q6P5X7 295 aa15.17■□□□□ 0.02
UFD1-209ENST00000489406 C17orf82Q86X59 251 aaPredicted RBP15.17■□□□□ 0.02
UFD1-209ENST00000489406 FAM186BQ8IYM0 893 aa15.17■□□□□ 0.02
UFD1-209ENST00000489406 GOLGA5Q8TBA6 731 aa15.17■□□□□ 0.02
UFD1-209ENST00000489406 CXorf40AQ8TE69 158 aa15.17■□□□□ 0.02
UFD1-209ENST00000489406 SLC35F5Q8WV83 523 aa15.17■□□□□ 0.02
UFD1-209ENST00000489406 PNPLA2Q96AD5 504 aa15.17■□□□□ 0.02
UFD1-209ENST00000489406 FAM149B1Q96BN6 582 aa15.17■□□□□ 0.02
UFD1-209ENST00000489406 ARHGEF26Q96DR7 871 aa15.17■□□□□ 0.02
UFD1-209ENST00000489406 WRAP53Q9BUR4 548 aaKnown RBP15.17■□□□□ 0.02
UFD1-209ENST00000489406 COQ6Q9Y2Z9 468 aa15.17■□□□□ 0.02
UFD1-209ENST00000489406 ZNF451Q9Y4E5 1061 aa15.17■□□□□ 0.02
UFD1-209ENST00000489406 SRPRBQ9Y5M8 271 aaKnown RBP15.17■□□□□ 0.02
UFD1-209ENST00000489406 ARHGEF17Q96PE2 2063 aaPredicted RBP15.16■□□□□ 0.02
UFD1-209ENST00000489406 A0A0D9SEW6 157 aa15.16■□□□□ 0.02
UFD1-209ENST00000489406 ZSCAN5CA6NGD5 496 aaPredicted RBP15.16■□□□□ 0.02
UFD1-209ENST00000489406 AREL1O15033 823 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms