RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 GREB1LQ9C091 1923 aaPredicted RBP3.04□□□□□ -1.92
CALD1-221ENST00000489019 CYP3A7-CYP3A51PA0A087WV96 503 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 CTAGE15A4D2H0 777 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 ARHGEF35A5YM69 484 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 LRRC53A6NM62 1247 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 EIF3CLB5ME19 914 aaKnown RBP3.04□□□□□ -1.92
CALD1-221ENST00000489019 FAM86B1E9PN63 330 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 POC1B-GALNT4F8VUJ3 575 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 DDX39AO00148 427 aaKnown RBP3.04□□□□□ -1.92
CALD1-221ENST00000489019 PPP6CO00743 305 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 CES2O00748 559 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 KPNA5O15131 536 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 WDR46O15213 610 aaKnown RBP3.04□□□□□ -1.92
CALD1-221ENST00000489019 TP73O15350 636 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 EDIL3O43854 480 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 MGEA5O60502 916 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 ZBED4O75132 1171 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 TACC1O75410 805 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 PIAS2O75928 621 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 GCNT3O95395 438 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 MT-ND5P03915 603 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 ASNSP08243 561 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 CYP3A4P08684 503 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 FAM86B2P0C5J1 330 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 CTAGE8P0CG41 777 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 EPB41P11171 864 aaKnown RBP3.04□□□□□ -1.92
CALD1-221ENST00000489019 CYP2A6P11509 494 aaPredicted RBP3.04□□□□□ -1.92
CALD1-221ENST00000489019 MYCLP12524 364 aaPredicted RBP3.04□□□□□ -1.92
CALD1-221ENST00000489019 CYP11B2P19099 503 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 KELP23276 732 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 CYP3A7P24462 503 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 ACVR2AP27037 513 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 RPA1P27694 616 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 EPHA3P29320 983 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 NTSR1P30989 418 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 CIITAP33076 1130 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 DIO1P49895 249 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 MMP14P50281 582 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 ZNF81P51508 661 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 PRELPP51888 382 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 PGDP52209 483 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 SLC12A3P55017 1021 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 TUBB4BP68371 445 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 HTRA4P83105 476 aaPredicted RBP3.04□□□□□ -1.92
CALD1-221ENST00000489019 SETQ01105 290 aaPredicted RBP3.04□□□□□ -1.92
CALD1-221ENST00000489019 CXCL9Q07325 125 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 KIF5AQ12840 1032 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 LMAN2Q12907 356 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 KLF9Q13886 244 aaPredicted RBP3.04□□□□□ -1.92
CALD1-221ENST00000489019 GIT2Q14161 759 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 KCNAB1Q14722 419 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 MAPRE1Q15691 268 aaKnown RBP3.04□□□□□ -1.92
CALD1-221ENST00000489019 ASIC2Q16515 512 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 WHAMMP3Q1A5X7 153 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 KNOP1Q1ED39 458 aaKnown RBP3.04□□□□□ -1.92
CALD1-221ENST00000489019 TUBB8Q3ZCM7 444 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 MTX3Q5HYI7 312 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 HYIQ5T013 277 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 SFMBT2Q5VUG0 894 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 KIAA1614Q5VZ46 1190 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 PLAG1Q6DJT9 500 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 SLC18B1Q6NT16 456 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 FBXO38Q6PIJ6 1188 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 PTCHD4Q6ZW05 846 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 STXBP4Q6ZWJ1 553 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 RRAGAQ7L523 313 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 MIER3Q7Z3K6 550 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 CTAGE6Q86UF2 777 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 SFR1Q86XK3 245 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 CATSPER3Q86XQ3 398 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 SFTPA1Q8IWL2 248 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 CTAGE4Q8IX94 777 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 CCDC170Q8IYT3 715 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 SYCP3Q8IZU3 236 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 GALNT4Q8N4A0 578 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 MYCT1Q8N699 235 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 METTL25Q8N6Q8 603 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 SYT2Q8N9I0 419 aaPredicted RBP3.04□□□□□ -1.92
CALD1-221ENST00000489019 ETNPPLQ8TBG4 499 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 SECISBP2LQ93073 1101 aaKnown RBP3.04□□□□□ -1.92
CALD1-221ENST00000489019 DNAJC19Q96DA6 116 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 RIPOR3Q96MK2 946 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 ALS2CR12Q96Q35 445 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 SPAG5Q96R06 1193 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 WDR24Q96S15 920 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 EIF3CQ99613 913 aaKnown RBP3.04□□□□□ -1.92
CALD1-221ENST00000489019 CHP1Q99653 195 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 EIF2AK1Q9BQI3 630 aaKnown RBP3.04□□□□□ -1.92
CALD1-221ENST00000489019 POLR3CQ9BUI4 534 aaPredicted RBP3.04□□□□□ -1.92
CALD1-221ENST00000489019 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.04□□□□□ -1.92
CALD1-221ENST00000489019 SELENOOQ9BVL4 669 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 SEMA4CQ9C0C4 833 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 RANBP17Q9H2T7 1088 aaKnown RBP3.04□□□□□ -1.92
CALD1-221ENST00000489019 NHEJ1Q9H9Q4 299 aaPredicted RBP3.04□□□□□ -1.92
CALD1-221ENST00000489019 TUFT1Q9NNX1 390 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 KCNMB3Q9NPA1 279 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 FAM207AQ9NSI2 230 aaPredicted RBP3.04□□□□□ -1.92
CALD1-221ENST00000489019 OGFRQ9NZT2 677 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.04□□□□□ -1.92
CALD1-221ENST00000489019 RGS17Q9UGC6 210 aaPredicted RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms