RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 PRKCGP05129 697 aa12.42□□□□□ -0.42
TRAIP-209ENST00000488860 ACADMP11310 421 aa12.42□□□□□ -0.42
TRAIP-209ENST00000488860 GABRG2P18507 467 aa12.42□□□□□ -0.42
TRAIP-209ENST00000488860 XPAP23025 273 aaPredicted RBP12.42□□□□□ -0.42
TRAIP-209ENST00000488860 SLC8A1P32418 973 aa12.42□□□□□ -0.42
TRAIP-209ENST00000488860 CHRNA4P43681 627 aa12.42□□□□□ -0.42
TRAIP-209ENST00000488860 CCR3P51677 355 aa12.42□□□□□ -0.42
TRAIP-209ENST00000488860 ITGA8P53708 1063 aa12.42□□□□□ -0.42
TRAIP-209ENST00000488860 CDK18Q07002 472 aa12.42□□□□□ -0.42
TRAIP-209ENST00000488860 KCNJ11Q14654 390 aa12.42□□□□□ -0.42
TRAIP-209ENST00000488860 SLC14A2Q15849 920 aa12.42□□□□□ -0.42
TRAIP-209ENST00000488860 TTC31Q49AM3 519 aaPredicted RBP12.42□□□□□ -0.42
TRAIP-209ENST00000488860 GLE1Q53GS7 698 aaKnown RBP12.42□□□□□ -0.42
TRAIP-209ENST00000488860 ZNF805Q5CZA5 627 aa12.42□□□□□ -0.42
TRAIP-209ENST00000488860 ANKRD22Q5VYY1 191 aa12.42□□□□□ -0.42
TRAIP-209ENST00000488860 PARS2Q7L3T8 475 aaKnown RBP12.42□□□□□ -0.42
TRAIP-209ENST00000488860 PPIL6Q8IXY8 311 aa12.42□□□□□ -0.42
TRAIP-209ENST00000488860 TMIEQ8NEW7 156 aa12.42□□□□□ -0.42
TRAIP-209ENST00000488860 CPT1BQ92523 772 aa12.42□□□□□ -0.42
TRAIP-209ENST00000488860 TADA1Q96BN2 335 aa12.42□□□□□ -0.42
TRAIP-209ENST00000488860 RMDN1Q96DB5 314 aa12.42□□□□□ -0.42
TRAIP-209ENST00000488860 SIPA1Q96FS4 1042 aa12.42□□□□□ -0.42
TRAIP-209ENST00000488860 LRIG1Q96JA1 1093 aa12.42□□□□□ -0.42
TRAIP-209ENST00000488860 FEM1CQ96JP0 617 aa12.42□□□□□ -0.42
TRAIP-209ENST00000488860 ZNF641Q96N77 438 aaPredicted RBP12.42□□□□□ -0.42
TRAIP-209ENST00000488860 IER2Q9BTL4 223 aa12.42□□□□□ -0.42
TRAIP-209ENST00000488860 COL25A1Q9BXS0 654 aaPredicted RBP12.42□□□□□ -0.42
TRAIP-209ENST00000488860 EIF2B3Q9NR50 452 aaKnown RBP12.42□□□□□ -0.42
TRAIP-209ENST00000488860 PIH1D1Q9NWS0 290 aaKnown RBP12.42□□□□□ -0.42
TRAIP-209ENST00000488860 PPM1HQ9ULR3 514 aa12.42□□□□□ -0.42
TRAIP-209ENST00000488860 TPX2Q9ULW0 747 aaKnown RBP12.42□□□□□ -0.42
TRAIP-209ENST00000488860 PLXND1Q9Y4D7 1925 aa12.42□□□□□ -0.42
TRAIP-209ENST00000488860 TRAFD1O14545 582 aaPredicted RBP12.41□□□□□ -0.42
TRAIP-209ENST00000488860 HTRA2O43464 458 aaPredicted RBP12.41□□□□□ -0.42
TRAIP-209ENST00000488860 RNASEH2AO75792 299 aaKnown RBP12.41□□□□□ -0.42
TRAIP-209ENST00000488860 TMEM63AO94886 807 aa12.41□□□□□ -0.42
TRAIP-209ENST00000488860 SEC31AO94979 1220 aaKnown RBP12.41□□□□□ -0.42
TRAIP-209ENST00000488860 PGLSO95336 258 aa12.41□□□□□ -0.42
TRAIP-209ENST00000488860 APBB3O95704 486 aa12.41□□□□□ -0.42
TRAIP-209ENST00000488860 AGTP01019 485 aa12.41□□□□□ -0.42
TRAIP-209ENST00000488860 SLC4A1P02730 911 aa12.41□□□□□ -0.42
TRAIP-209ENST00000488860 PDHA1P08559 390 aa12.41□□□□□ -0.42
TRAIP-209ENST00000488860 CTPS1P17812 591 aa12.41□□□□□ -0.42
TRAIP-209ENST00000488860 TPSB2P20231 275 aa12.41□□□□□ -0.42
TRAIP-209ENST00000488860 C5AR1P21730 350 aa12.41□□□□□ -0.42
TRAIP-209ENST00000488860 ITGB7P26010 798 aa12.41□□□□□ -0.42
TRAIP-209ENST00000488860 CXCL12P48061 93 aa12.41□□□□□ -0.42
TRAIP-209ENST00000488860 CLCN5P51795 746 aa12.41□□□□□ -0.42
TRAIP-209ENST00000488860 CALCOCO2Q13137 446 aa12.41□□□□□ -0.42
TRAIP-209ENST00000488860 TPSAB1Q15661 275 aa12.41□□□□□ -0.42
TRAIP-209ENST00000488860 RNASEH2BQ5TBB1 312 aaKnown RBP12.41□□□□□ -0.42
TRAIP-209ENST00000488860 KCTD11Q693B1 232 aa12.41□□□□□ -0.42
TRAIP-209ENST00000488860 NAPEPLDQ6IQ20 393 aa12.41□□□□□ -0.42
TRAIP-209ENST00000488860 PCGF5Q86SE9 256 aa12.41□□□□□ -0.42
TRAIP-209ENST00000488860 ZSWIM9Q86XI8 627 aa12.41□□□□□ -0.42
TRAIP-209ENST00000488860 HDDC3Q8N4P3 179 aa12.41□□□□□ -0.42
TRAIP-209ENST00000488860 TMEM105Q8N8V8 129 aa12.41□□□□□ -0.42
TRAIP-209ENST00000488860 MDGA1Q8NFP4 955 aa12.41□□□□□ -0.42
TRAIP-209ENST00000488860 OR52K1Q8NGK4 314 aa12.41□□□□□ -0.42
TRAIP-209ENST00000488860 MRGPRX1Q96LB2 322 aa12.41□□□□□ -0.42
TRAIP-209ENST00000488860 OMDQ99983 421 aa12.41□□□□□ -0.42
TRAIP-209ENST00000488860 ADGRE3Q9BY15 652 aa12.41□□□□□ -0.42
TRAIP-209ENST00000488860 TPSD1Q9BZJ3 242 aa12.41□□□□□ -0.42
TRAIP-209ENST00000488860 ZNF106Q9H2Y7 1883 aaKnown RBP12.41□□□□□ -0.42
TRAIP-209ENST00000488860 PABPC3Q9H361 631 aaKnown RBP12.41□□□□□ -0.42
TRAIP-209ENST00000488860 EPB41L5Q9HCM4 733 aa12.41□□□□□ -0.42
TRAIP-209ENST00000488860 CD248Q9HCU0 757 aa12.41□□□□□ -0.42
TRAIP-209ENST00000488860 DLGAP2Q9P1A6 1054 aa12.41□□□□□ -0.42
TRAIP-209ENST00000488860 DMGDHQ9UI17 866 aaKnown RBP12.41□□□□□ -0.42
TRAIP-209ENST00000488860 MUC3AQ02505 3323 aa12.4□□□□□ -0.42
TRAIP-209ENST00000488860 PLXNA2O75051 1894 aa12.4□□□□□ -0.42
TRAIP-209ENST00000488860 C16orf96A6NNT2 1141 aa12.4□□□□□ -0.42
TRAIP-209ENST00000488860 ERI2A8K979 691 aaKnown RBP12.4□□□□□ -0.42
TRAIP-209ENST00000488860 UPK3BL1B0FP48 263 aa12.4□□□□□ -0.42
TRAIP-209ENST00000488860 UPK3BL2E5RIL1 263 aa12.4□□□□□ -0.42
TRAIP-209ENST00000488860 NDC80O14777 642 aa12.4□□□□□ -0.42
TRAIP-209ENST00000488860 NDST3O95803 873 aa12.4□□□□□ -0.42
TRAIP-209ENST00000488860 ALPIP09923 528 aa12.4□□□□□ -0.42
TRAIP-209ENST00000488860 PIRTP0C851 137 aa12.4□□□□□ -0.42
TRAIP-209ENST00000488860 HLA-DPA1P20036 260 aa12.4□□□□□ -0.42
TRAIP-209ENST00000488860 PXNP49023 591 aaPredicted RBP12.4□□□□□ -0.42
TRAIP-209ENST00000488860 NEK3P51956 506 aa12.4□□□□□ -0.42
TRAIP-209ENST00000488860 SEMG2Q02383 582 aa12.4□□□□□ -0.42
TRAIP-209ENST00000488860 CNTN1Q12860 1018 aa12.4□□□□□ -0.42
TRAIP-209ENST00000488860 MTM1Q13496 603 aa12.4□□□□□ -0.42
TRAIP-209ENST00000488860 SLC1A5Q15758 541 aa12.4□□□□□ -0.42
TRAIP-209ENST00000488860 SIRPB2Q5JXA9 342 aa12.4□□□□□ -0.42
TRAIP-209ENST00000488860 DUPD1Q68J44 220 aa12.4□□□□□ -0.42
TRAIP-209ENST00000488860 FBXL19Q6PCT2 694 aa12.4□□□□□ -0.42
TRAIP-209ENST00000488860 BRAT1Q6PJG6 821 aa12.4□□□□□ -0.42
TRAIP-209ENST00000488860 ERN2Q76MJ5 926 aaKnown RBP12.4□□□□□ -0.42
TRAIP-209ENST00000488860 LINC00523Q86TU6 105 aa12.4□□□□□ -0.42
TRAIP-209ENST00000488860 FAM124AQ86V42 546 aa12.4□□□□□ -0.42
TRAIP-209ENST00000488860 KLHDC8BQ8IXV7 354 aa12.4□□□□□ -0.42
TRAIP-209ENST00000488860 FBXL6Q8N531 539 aa12.4□□□□□ -0.42
TRAIP-209ENST00000488860 AADATQ8N5Z0 425 aa12.4□□□□□ -0.42
TRAIP-209ENST00000488860 DNAAF3Q8N9W5 541 aa12.4□□□□□ -0.42
TRAIP-209ENST00000488860 BBOF1Q8ND07 529 aa12.4□□□□□ -0.42
TRAIP-209ENST00000488860 VOPP1Q96AW1 172 aa12.4□□□□□ -0.42
TRAIP-209ENST00000488860 ECHDC3Q96DC8 303 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms