RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 RIOK3O14730 519 aaKnown RBP22.82■■□□□ 1.24
PTPN4-211ENST00000488279 ERCC2P18074 760 aa22.82■■□□□ 1.24
PTPN4-211ENST00000488279 IGFALSP35858 605 aa22.82■■□□□ 1.24
PTPN4-211ENST00000488279 ZNF135P52742 658 aaPredicted RBP22.82■■□□□ 1.24
PTPN4-211ENST00000488279 PPP6R3Q5H9R7 873 aaPredicted RBP22.82■■□□□ 1.24
PTPN4-211ENST00000488279 BRAT1Q6PJG6 821 aa22.82■■□□□ 1.24
PTPN4-211ENST00000488279 TP53I13Q8NBR0 393 aaPredicted RBP22.82■■□□□ 1.24
PTPN4-211ENST00000488279 ZNF653Q96CK0 615 aa22.82■■□□□ 1.24
PTPN4-211ENST00000488279 TRIM11Q96F44 468 aa22.82■■□□□ 1.24
PTPN4-211ENST00000488279 TUBGCP5Q96RT8 1024 aa22.82■■□□□ 1.24
PTPN4-211ENST00000488279 KCTD15Q96SI1 283 aaPredicted RBP22.82■■□□□ 1.24
PTPN4-211ENST00000488279 IL12RB2Q99665 862 aa22.82■■□□□ 1.24
PTPN4-211ENST00000488279 TRIM7Q9C029 511 aa22.82■■□□□ 1.24
PTPN4-211ENST00000488279 MRPL47Q9HD33 250 aaKnown RBP22.82■■□□□ 1.24
PTPN4-211ENST00000488279 MBNL1Q9NR56 388 aaKnown RBP22.82■■□□□ 1.24
PTPN4-211ENST00000488279 SALL4Q9UJQ4 1053 aa22.82■■□□□ 1.24
PTPN4-211ENST00000488279 CACNA1GO43497 2377 aa22.82■■□□□ 1.24
PTPN4-211ENST00000488279 ADAMTS20P59510 1910 aa22.81■■□□□ 1.24
PTPN4-211ENST00000488279 LY6G6EA0A0G2JKS1 128 aa22.81■■□□□ 1.24
PTPN4-211ENST00000488279 TPP1O14773 563 aa22.81■■□□□ 1.24
PTPN4-211ENST00000488279 BUB1BO60566 1050 aaPredicted RBP22.81■■□□□ 1.24
PTPN4-211ENST00000488279 MYBL1P10243 752 aa22.81■■□□□ 1.24
PTPN4-211ENST00000488279 SKILP12757 684 aa22.81■■□□□ 1.24
PTPN4-211ENST00000488279 EIF4A3P38919 411 aaKnown RBP22.81■■□□□ 1.24
PTPN4-211ENST00000488279 CSNK1DP48730 415 aa22.81■■□□□ 1.24
PTPN4-211ENST00000488279 HCAR3P49019 387 aa22.81■■□□□ 1.24
PTPN4-211ENST00000488279 LRRC14Q15048 493 aa22.81■■□□□ 1.24
PTPN4-211ENST00000488279 AFMIDQ63HM1 303 aa22.81■■□□□ 1.24
PTPN4-211ENST00000488279 E4F1Q66K89 784 aaPredicted RBP22.81■■□□□ 1.24
PTPN4-211ENST00000488279 ERAP2Q6P179 960 aa22.81■■□□□ 1.24
PTPN4-211ENST00000488279 IFI44Q8TCB0 444 aa22.81■■□□□ 1.24
PTPN4-211ENST00000488279 SLC13A1Q9BZW2 595 aa22.81■■□□□ 1.24
PTPN4-211ENST00000488279 PCDH12Q9NPG4 1184 aa22.81■■□□□ 1.24
PTPN4-211ENST00000488279 MYO1AQ9UBC5 1043 aa22.81■■□□□ 1.24
PTPN4-211ENST00000488279 APOBEC3BQ9UH17 382 aaKnown RBP22.81■■□□□ 1.24
PTPN4-211ENST00000488279 U3KQA8 63 aa22.81■■□□□ 1.24
PTPN4-211ENST00000488279 TSPAN11A1L157 253 aa22.8■■□□□ 1.24
PTPN4-211ENST00000488279 DFFAO00273 331 aa22.8■■□□□ 1.24
PTPN4-211ENST00000488279 IQCB1Q15051 598 aa22.8■■□□□ 1.24
PTPN4-211ENST00000488279 DEFB133Q30KQ1 61 aa22.8■■□□□ 1.24
PTPN4-211ENST00000488279 PRRT3Q5FWE3 981 aa22.8■■□□□ 1.24
PTPN4-211ENST00000488279 FAXCQ5TGI0 409 aa22.8■■□□□ 1.24
PTPN4-211ENST00000488279 CDCP2Q5VXM1 449 aa22.8■■□□□ 1.24
PTPN4-211ENST00000488279 SRLQ86TD4 932 aa22.8■■□□□ 1.24
PTPN4-211ENST00000488279 CAMK1DQ8IU85 385 aa22.8■■□□□ 1.24
PTPN4-211ENST00000488279 TSEN2Q8NCE0 465 aaKnown RBP22.8■■□□□ 1.24
PTPN4-211ENST00000488279 DEPDC7Q96QD5 511 aa22.8■■□□□ 1.24
PTPN4-211ENST00000488279 ATP13A3Q9H7F0 1226 aa22.8■■□□□ 1.24
PTPN4-211ENST00000488279 SP110Q9HB58 689 aa22.8■■□□□ 1.24
PTPN4-211ENST00000488279 TDRD6O60522 2096 aaKnown RBP22.8■■□□□ 1.24
PTPN4-211ENST00000488279 TMEM110-MUSTN1A8MSY1 372 aa22.79■■□□□ 1.24
PTPN4-211ENST00000488279 RRP8O43159 456 aaKnown RBP22.79■■□□□ 1.24
PTPN4-211ENST00000488279 BRINP1O60477 761 aa22.79■■□□□ 1.24
PTPN4-211ENST00000488279 LRCH4O75427 683 aa22.79■■□□□ 1.24
PTPN4-211ENST00000488279 SERPINA4P29622 427 aa22.79■■□□□ 1.24
PTPN4-211ENST00000488279 PCK1P35558 622 aa22.79■■□□□ 1.24
PTPN4-211ENST00000488279 EIF2S3P41091 472 aaKnown RBP22.79■■□□□ 1.24
PTPN4-211ENST00000488279 LIG3P49916 1009 aa22.79■■□□□ 1.24
PTPN4-211ENST00000488279 PEX5P50542 639 aa22.79■■□□□ 1.24
PTPN4-211ENST00000488279 PPARDQ03181 441 aa22.79■■□□□ 1.24
PTPN4-211ENST00000488279 NSUN2Q08J23 767 aaKnown RBP eCLIP22.79■■□□□ 1.24
PTPN4-211ENST00000488279 RFTN1Q14699 578 aaPredicted RBP22.79■■□□□ 1.24
PTPN4-211ENST00000488279 ACAP1Q15027 740 aa22.79■■□□□ 1.24
PTPN4-211ENST00000488279 IRF4Q15306 451 aa22.79■■□□□ 1.24
PTPN4-211ENST00000488279 CDKN3Q16667 212 aa22.79■■□□□ 1.24
PTPN4-211ENST00000488279 FIGNQ5HY92 759 aa22.79■■□□□ 1.24
PTPN4-211ENST00000488279 MACC1Q6ZN28 852 aa22.79■■□□□ 1.24
PTPN4-211ENST00000488279 LRRC69Q6ZNQ3 347 aa22.79■■□□□ 1.24
PTPN4-211ENST00000488279 CYP4V2Q6ZWL3 525 aaPredicted RBP22.79■■□□□ 1.24
PTPN4-211ENST00000488279 ARHGAP12Q8IWW6 846 aa22.79■■□□□ 1.24
PTPN4-211ENST00000488279 PHACTR4Q8IZ21 702 aa22.79■■□□□ 1.24
PTPN4-211ENST00000488279 RBFAQ8N0V3 343 aa22.79■■□□□ 1.24
PTPN4-211ENST00000488279 LZTR1Q8N653 840 aa22.79■■□□□ 1.24
PTPN4-211ENST00000488279 MAPK15Q8TD08 544 aa22.79■■□□□ 1.24
PTPN4-211ENST00000488279 GLMNQ92990 594 aa22.79■■□□□ 1.24
PTPN4-211ENST00000488279 TBATAQ96M53 351 aa22.79■■□□□ 1.24
PTPN4-211ENST00000488279 CINPQ9BW66 212 aaPredicted RBP22.79■■□□□ 1.24
PTPN4-211ENST00000488279 ISCUQ9H1K1 167 aa22.79■■□□□ 1.24
PTPN4-211ENST00000488279 TCEAL2Q9H3H9 227 aaPredicted RBP22.79■■□□□ 1.24
PTPN4-211ENST00000488279 ZWILCHQ9H900 591 aa22.79■■□□□ 1.24
PTPN4-211ENST00000488279 CWC15Q9P013 229 aaKnown RBP22.79■■□□□ 1.24
PTPN4-211ENST00000488279 COQ6Q9Y2Z9 468 aa22.79■■□□□ 1.24
PTPN4-211ENST00000488279 CPED1A4D0V7 1026 aa22.78■■□□□ 1.24
PTPN4-211ENST00000488279 LMO7DNF2Z398 122 aa22.78■■□□□ 1.24
PTPN4-211ENST00000488279 TLX3O43711 291 aaPredicted RBP22.78■■□□□ 1.24
PTPN4-211ENST00000488279 LZTS3O60299 673 aaPredicted RBP22.78■■□□□ 1.24
PTPN4-211ENST00000488279 GCATO75600 419 aa22.78■■□□□ 1.24
PTPN4-211ENST00000488279 C6P13671 934 aa22.78■■□□□ 1.24
PTPN4-211ENST00000488279 HOXB3P14651 431 aaPredicted RBP22.78■■□□□ 1.24
PTPN4-211ENST00000488279 ABCG1P45844 678 aa22.78■■□□□ 1.24
PTPN4-211ENST00000488279 RPIAP49247 311 aa22.78■■□□□ 1.24
PTPN4-211ENST00000488279 BLKP51451 505 aa22.78■■□□□ 1.24
PTPN4-211ENST00000488279 ADKP55263 362 aaKnown RBP22.78■■□□□ 1.24
PTPN4-211ENST00000488279 TPM4P67936 248 aa22.78■■□□□ 1.24
PTPN4-211ENST00000488279 IL10RBQ08334 325 aa22.78■■□□□ 1.24
PTPN4-211ENST00000488279 C1orf61Q13536 156 aa22.78■■□□□ 1.24
PTPN4-211ENST00000488279 NR0B2Q15466 257 aa22.78■■□□□ 1.24
PTPN4-211ENST00000488279 WSCD2Q2TBF2 565 aa22.78■■□□□ 1.24
PTPN4-211ENST00000488279 BOLA3Q53S33 107 aa22.78■■□□□ 1.24
PTPN4-211ENST00000488279 FGF11Q92914 225 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms