RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 TPRG1LQ5T0D9 272 aa12.57□□□□□ -0.4
SREBF1-215ENST00000487401 BRAT1Q6PJG6 821 aa12.57□□□□□ -0.4
SREBF1-215ENST00000487401 SRLQ86TD4 932 aa12.57□□□□□ -0.4
SREBF1-215ENST00000487401 PSTKQ8IV42 348 aaKnown RBP12.57□□□□□ -0.4
SREBF1-215ENST00000487401 FNIP1Q8TF40 1166 aa12.57□□□□□ -0.4
SREBF1-215ENST00000487401 ZNF653Q96CK0 615 aa12.57□□□□□ -0.4
SREBF1-215ENST00000487401 TUBGCP5Q96RT8 1024 aa12.57□□□□□ -0.4
SREBF1-215ENST00000487401 SNRNP25Q9BV90 132 aaKnown RBP12.57□□□□□ -0.4
SREBF1-215ENST00000487401 CINPQ9BW66 212 aaPredicted RBP12.57□□□□□ -0.4
SREBF1-215ENST00000487401 ATP13A3Q9H7F0 1226 aa12.57□□□□□ -0.4
SREBF1-215ENST00000487401 SP110Q9HB58 689 aa12.57□□□□□ -0.4
SREBF1-215ENST00000487401 PDFQ9HBH1 243 aa12.57□□□□□ -0.4
SREBF1-215ENST00000487401 MRPL47Q9HD33 250 aaKnown RBP12.57□□□□□ -0.4
SREBF1-215ENST00000487401 PCDH12Q9NPG4 1184 aa12.57□□□□□ -0.4
SREBF1-215ENST00000487401 MBNL1Q9NR56 388 aaKnown RBP12.57□□□□□ -0.4
SREBF1-215ENST00000487401 MYO1AQ9UBC5 1043 aa12.57□□□□□ -0.4
SREBF1-215ENST00000487401 APOBEC3BQ9UH17 382 aaKnown RBP12.57□□□□□ -0.4
SREBF1-215ENST00000487401 SALL4Q9UJQ4 1053 aa12.57□□□□□ -0.4
SREBF1-215ENST00000487401 A0A1B0GTH6 734 aa12.56□□□□□ -0.4
SREBF1-215ENST00000487401 TPP1O14773 563 aa12.56□□□□□ -0.4
SREBF1-215ENST00000487401 BRINP1O60477 761 aa12.56□□□□□ -0.4
SREBF1-215ENST00000487401 BUB1BO60566 1050 aaPredicted RBP12.56□□□□□ -0.4
SREBF1-215ENST00000487401 ANXA6P08133 673 aa12.56□□□□□ -0.4
SREBF1-215ENST00000487401 HOXB3P14651 431 aaPredicted RBP12.56□□□□□ -0.4
SREBF1-215ENST00000487401 ERCC2P18074 760 aa12.56□□□□□ -0.4
SREBF1-215ENST00000487401 SERPINA4P29622 427 aa12.56□□□□□ -0.4
SREBF1-215ENST00000487401 PRKCIP41743 596 aa12.56□□□□□ -0.4
SREBF1-215ENST00000487401 CSNK1DP48730 415 aa12.56□□□□□ -0.4
SREBF1-215ENST00000487401 LIG3P49916 1009 aa12.56□□□□□ -0.4
SREBF1-215ENST00000487401 BLKP51451 505 aa12.56□□□□□ -0.4
SREBF1-215ENST00000487401 PPARDQ03181 441 aa12.56□□□□□ -0.4
SREBF1-215ENST00000487401 C1orf61Q13536 156 aa12.56□□□□□ -0.4
SREBF1-215ENST00000487401 RFTN1Q14699 578 aaPredicted RBP12.56□□□□□ -0.4
SREBF1-215ENST00000487401 NR1I3Q14994 352 aa12.56□□□□□ -0.4
SREBF1-215ENST00000487401 IRF4Q15306 451 aa12.56□□□□□ -0.4
SREBF1-215ENST00000487401 CDCP2Q5VXM1 449 aa12.56□□□□□ -0.4
SREBF1-215ENST00000487401 MACC1Q6ZN28 852 aa12.56□□□□□ -0.4
SREBF1-215ENST00000487401 EFL1Q7Z2Z2 1120 aaKnown RBP12.56□□□□□ -0.4
SREBF1-215ENST00000487401 CAMK1DQ8IU85 385 aa12.56□□□□□ -0.4
SREBF1-215ENST00000487401 PHACTR4Q8IZ21 702 aa12.56□□□□□ -0.4
SREBF1-215ENST00000487401 ARFGAP1Q8N6T3 406 aa12.56□□□□□ -0.4
SREBF1-215ENST00000487401 TP53I13Q8NBR0 393 aaPredicted RBP12.56□□□□□ -0.4
SREBF1-215ENST00000487401 TPCN2Q8NHX9 752 aa12.56□□□□□ -0.4
SREBF1-215ENST00000487401 FGF11Q92914 225 aa12.56□□□□□ -0.4
SREBF1-215ENST00000487401 PEBP4Q96S96 227 aa12.56□□□□□ -0.4
SREBF1-215ENST00000487401 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.56□□□□□ -0.4
SREBF1-215ENST00000487401 TRIM7Q9C029 511 aa12.56□□□□□ -0.4
SREBF1-215ENST00000487401 DOLKQ9UPQ8 538 aa12.56□□□□□ -0.4
SREBF1-215ENST00000487401 COQ6Q9Y2Z9 468 aa12.56□□□□□ -0.4
SREBF1-215ENST00000487401 LY6G6EA0A0G2JKS1 128 aa12.55□□□□□ -0.4
SREBF1-215ENST00000487401 TSPAN11A1L157 253 aa12.55□□□□□ -0.4
SREBF1-215ENST00000487401 LMO7DNF2Z398 122 aa12.55□□□□□ -0.4
SREBF1-215ENST00000487401 H3BRJ5 948 aa12.55□□□□□ -0.4
SREBF1-215ENST00000487401 TLX3O43711 291 aaPredicted RBP12.55□□□□□ -0.4
SREBF1-215ENST00000487401 CSO75390 466 aaKnown RBP12.55□□□□□ -0.4
SREBF1-215ENST00000487401 C6P13671 934 aa12.55□□□□□ -0.4
SREBF1-215ENST00000487401 CTSEP14091 401 aa12.55□□□□□ -0.4
SREBF1-215ENST00000487401 HTR1BP28222 390 aa12.55□□□□□ -0.4
SREBF1-215ENST00000487401 PCK1P35558 622 aa12.55□□□□□ -0.4
SREBF1-215ENST00000487401 EIF2S3P41091 472 aaKnown RBP12.55□□□□□ -0.4
SREBF1-215ENST00000487401 HCAR3P49019 387 aa12.55□□□□□ -0.4
SREBF1-215ENST00000487401 PEX5P50542 639 aa12.55□□□□□ -0.4
SREBF1-215ENST00000487401 RENBPP51606 427 aa12.55□□□□□ -0.4
SREBF1-215ENST00000487401 POLR2LP62875 67 aaKnown RBP12.55□□□□□ -0.4
SREBF1-215ENST00000487401 BCL2L1Q07817 233 aa12.55□□□□□ -0.4
SREBF1-215ENST00000487401 IL10RBQ08334 325 aa12.55□□□□□ -0.4
SREBF1-215ENST00000487401 WSCD2Q2TBF2 565 aa12.55□□□□□ -0.4
SREBF1-215ENST00000487401 BOLA3Q53S33 107 aa12.55□□□□□ -0.4
SREBF1-215ENST00000487401 AFMIDQ63HM1 303 aa12.55□□□□□ -0.4
SREBF1-215ENST00000487401 ESRP1Q6NXG1 681 aaKnown RBP12.55□□□□□ -0.4
SREBF1-215ENST00000487401 ENPP7Q6UWV6 458 aa12.55□□□□□ -0.4
SREBF1-215ENST00000487401 HID1Q8IV36 788 aa12.55□□□□□ -0.4
SREBF1-215ENST00000487401 RBFAQ8N0V3 343 aa12.55□□□□□ -0.4
SREBF1-215ENST00000487401 LZTR1Q8N653 840 aa12.55□□□□□ -0.4
SREBF1-215ENST00000487401 TSEN2Q8NCE0 465 aaKnown RBP12.55□□□□□ -0.4
SREBF1-215ENST00000487401 ATL2Q8NHH9 583 aa12.55□□□□□ -0.4
SREBF1-215ENST00000487401 SCG3Q8WXD2 468 aaKnown RBP12.55□□□□□ -0.4
SREBF1-215ENST00000487401 TBATAQ96M53 351 aa12.55□□□□□ -0.4
SREBF1-215ENST00000487401 TCEAL2Q9H3H9 227 aaPredicted RBP12.55□□□□□ -0.4
SREBF1-215ENST00000487401 ZWILCHQ9H900 591 aa12.55□□□□□ -0.4
SREBF1-215ENST00000487401 CWC15Q9P013 229 aaKnown RBP12.55□□□□□ -0.4
SREBF1-215ENST00000487401 ATP8A1Q9Y2Q0 1164 aa12.55□□□□□ -0.4
SREBF1-215ENST00000487401 PCDHB1Q9Y5F3 818 aa12.55□□□□□ -0.4
SREBF1-215ENST00000487401 U3KQA8 63 aa12.55□□□□□ -0.4
SREBF1-215ENST00000487401 ANKRD11Q6UB99 2663 aaPredicted RBP12.55□□□□□ -0.4
SREBF1-215ENST00000487401 CABIN1Q9Y6J0 2220 aa12.55□□□□□ -0.4
SREBF1-215ENST00000487401 ZFYVE26Q68DK2 2539 aa12.54□□□□□ -0.4
SREBF1-215ENST00000487401 EIF4E1BA6NMX2 242 aaKnown RBP12.54□□□□□ -0.4
SREBF1-215ENST00000487401 MUSKO15146 869 aa12.54□□□□□ -0.4
SREBF1-215ENST00000487401 YY2O15391 372 aa12.54□□□□□ -0.4
SREBF1-215ENST00000487401 USP12O75317 370 aa12.54□□□□□ -0.4
SREBF1-215ENST00000487401 LRCH4O75427 683 aa12.54□□□□□ -0.4
SREBF1-215ENST00000487401 GCATO75600 419 aa12.54□□□□□ -0.4
SREBF1-215ENST00000487401 PRKCGP05129 697 aa12.54□□□□□ -0.4
SREBF1-215ENST00000487401 PCCBP05166 539 aa12.54□□□□□ -0.4
SREBF1-215ENST00000487401 TSHRP16473 764 aa12.54□□□□□ -0.4
SREBF1-215ENST00000487401 ARL4AP40617 200 aa12.54□□□□□ -0.4
SREBF1-215ENST00000487401 SCNN1BP51168 640 aa12.54□□□□□ -0.4
SREBF1-215ENST00000487401 NSUN2Q08J23 767 aaKnown RBP eCLIP12.54□□□□□ -0.4
SREBF1-215ENST00000487401 INPP5AQ14642 412 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms