RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 ZWILCHQ9H900 591 aa14.57□□□□□ -0.08
CLDN11-207ENST00000486975 CWC15Q9P013 229 aaKnown RBP14.57□□□□□ -0.08
CLDN11-207ENST00000486975 PKD1L2Q7Z442 2459 aa14.57□□□□□ -0.08
CLDN11-207ENST00000486975 A0A087X0T9 212 aa14.56□□□□□ -0.08
CLDN11-207ENST00000486975 SRRM3A6NNA2 597 aaPredicted RBP14.56□□□□□ -0.08
CLDN11-207ENST00000486975 H3BRJ5 948 aa14.56□□□□□ -0.08
CLDN11-207ENST00000486975 TRIM38O00635 465 aa14.56□□□□□ -0.08
CLDN11-207ENST00000486975 INSIG1O15503 277 aa14.56□□□□□ -0.08
CLDN11-207ENST00000486975 CSF2P04141 144 aa14.56□□□□□ -0.08
CLDN11-207ENST00000486975 CYP1A2P05177 515 aa14.56□□□□□ -0.08
CLDN11-207ENST00000486975 TPM3P06753 285 aa14.56□□□□□ -0.08
CLDN11-207ENST00000486975 FAM228BP0C875 321 aa14.56□□□□□ -0.08
CLDN11-207ENST00000486975 GIMD1P0DJR0 217 aa14.56□□□□□ -0.08
CLDN11-207ENST00000486975 NME1P15531 152 aaKnown RBP14.56□□□□□ -0.08
CLDN11-207ENST00000486975 ACP1P24666 158 aa14.56□□□□□ -0.08
CLDN11-207ENST00000486975 IL1R2P27930 398 aa14.56□□□□□ -0.08
CLDN11-207ENST00000486975 HNRNPKP61978 463 aaKnown RBP eCLIP14.56□□□□□ -0.08
CLDN11-207ENST00000486975 KCNC4Q03721 635 aa14.56□□□□□ -0.08
CLDN11-207ENST00000486975 NSUN2Q08J23 767 aaKnown RBP eCLIP14.56□□□□□ -0.08
CLDN11-207ENST00000486975 DNAJC3Q13217 504 aa14.56□□□□□ -0.08
CLDN11-207ENST00000486975 TMEM52BQ4KMG9 183 aa14.56□□□□□ -0.08
CLDN11-207ENST00000486975 BRAT1Q6PJG6 821 aa14.56□□□□□ -0.08
CLDN11-207ENST00000486975 PARGQ86W56 976 aa14.56□□□□□ -0.08
CLDN11-207ENST00000486975 CACTIN-AS1Q8N1I8 211 aa14.56□□□□□ -0.08
CLDN11-207ENST00000486975 EXOC2Q96KP1 924 aa14.56□□□□□ -0.08
CLDN11-207ENST00000486975 ZNF599Q96NL3 588 aa14.56□□□□□ -0.08
CLDN11-207ENST00000486975 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.56□□□□□ -0.08
CLDN11-207ENST00000486975 THAP2Q9H0W7 228 aa14.56□□□□□ -0.08
CLDN11-207ENST00000486975 SUV39H2Q9H5I1 410 aa14.56□□□□□ -0.08
CLDN11-207ENST00000486975 IFNKQ9P0W0 207 aa14.56□□□□□ -0.08
CLDN11-207ENST00000486975 NENFQ9UMX5 172 aa14.56□□□□□ -0.08
CLDN11-207ENST00000486975 PLXNB3Q9ULL4 1909 aa14.56□□□□□ -0.08
CLDN11-207ENST00000486975 NEMP2A6NFY4 417 aa14.55□□□□□ -0.08
CLDN11-207ENST00000486975 H3BM21 787 aa14.55□□□□□ -0.08
CLDN11-207ENST00000486975 SIGLEC6O43699 453 aa14.55□□□□□ -0.08
CLDN11-207ENST00000486975 PALMO75781 387 aa14.55□□□□□ -0.08
CLDN11-207ENST00000486975 TM7SF2O76062 418 aa14.55□□□□□ -0.08
CLDN11-207ENST00000486975 HNF1BP35680 557 aa14.55□□□□□ -0.08
CLDN11-207ENST00000486975 ARL4AP40617 200 aa14.55□□□□□ -0.08
CLDN11-207ENST00000486975 YPEL5P62699 121 aa14.55□□□□□ -0.08
CLDN11-207ENST00000486975 AGERQ15109 404 aa14.55□□□□□ -0.08
CLDN11-207ENST00000486975 UGP2Q16851 508 aa14.55□□□□□ -0.08
CLDN11-207ENST00000486975 HS1BP3Q53T59 392 aa14.55□□□□□ -0.08
CLDN11-207ENST00000486975 TMCO4Q5TGY1 634 aa14.55□□□□□ -0.08
CLDN11-207ENST00000486975 ALKBH5Q6P6C2 394 aaKnown RBP14.55□□□□□ -0.08
CLDN11-207ENST00000486975 POLNQ7Z5Q5 900 aa14.55□□□□□ -0.08
CLDN11-207ENST00000486975 NETO2Q8NC67 525 aa14.55□□□□□ -0.08
CLDN11-207ENST00000486975 TSEN2Q8NCE0 465 aaKnown RBP14.55□□□□□ -0.08
CLDN11-207ENST00000486975 CXorf40AQ8TE69 158 aa14.55□□□□□ -0.08
CLDN11-207ENST00000486975 RFFLQ8WZ73 363 aa14.55□□□□□ -0.08
CLDN11-207ENST00000486975 ECHDC3Q96DC8 303 aa14.55□□□□□ -0.08
CLDN11-207ENST00000486975 TBATAQ96M53 351 aa14.55□□□□□ -0.08
CLDN11-207ENST00000486975 PSKH2Q96QS6 385 aa14.55□□□□□ -0.08
CLDN11-207ENST00000486975 CCDC86Q9H6F5 360 aaKnown RBP14.55□□□□□ -0.08
CLDN11-207ENST00000486975 ATP13A3Q9H7F0 1226 aa14.55□□□□□ -0.08
CLDN11-207ENST00000486975 SP110Q9HB58 689 aa14.55□□□□□ -0.08
CLDN11-207ENST00000486975 UCKL1Q9NWZ5 548 aa14.55□□□□□ -0.08
CLDN11-207ENST00000486975 DNAJC28Q9NX36 388 aa14.55□□□□□ -0.08
CLDN11-207ENST00000486975 NLGN3Q9NZ94 848 aa14.55□□□□□ -0.08
CLDN11-207ENST00000486975 RCOR3Q9P2K3 495 aaPredicted RBP14.55□□□□□ -0.08
CLDN11-207ENST00000486975 IP6K2Q9UHH9 426 aa14.55□□□□□ -0.08
CLDN11-207ENST00000486975 IPO11Q9UI26 975 aaKnown RBP14.55□□□□□ -0.08
CLDN11-207ENST00000486975 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.55□□□□□ -0.08
CLDN11-207ENST00000486975 CSNK1G3Q9Y6M4 447 aa14.55□□□□□ -0.08
CLDN11-207ENST00000486975 CHD6Q8TD26 2715 aa14.55□□□□□ -0.08
CLDN11-207ENST00000486975 ASPMQ8IZT6 3477 aa14.54□□□□□ -0.08
CLDN11-207ENST00000486975 CFAP69A5D8W1 941 aa14.54□□□□□ -0.08
CLDN11-207ENST00000486975 TAF4O00268 1085 aa14.54□□□□□ -0.08
CLDN11-207ENST00000486975 DFFAO00273 331 aa14.54□□□□□ -0.08
CLDN11-207ENST00000486975 SCAMP1O15126 338 aa14.54□□□□□ -0.08
CLDN11-207ENST00000486975 MMP20O60882 483 aa14.54□□□□□ -0.08
CLDN11-207ENST00000486975 PIGNO95427 931 aa14.54□□□□□ -0.08
CLDN11-207ENST00000486975 RARAP10276 462 aa14.54□□□□□ -0.08
CLDN11-207ENST00000486975 ALPPL2P10696 532 aa14.54□□□□□ -0.08
CLDN11-207ENST00000486975 TCF4P15884 667 aa14.54□□□□□ -0.08
CLDN11-207ENST00000486975 XPAP23025 273 aaPredicted RBP14.54□□□□□ -0.08
CLDN11-207ENST00000486975 SERPINA4P29622 427 aa14.54□□□□□ -0.08
CLDN11-207ENST00000486975 CASP14P31944 242 aa14.54□□□□□ -0.08
CLDN11-207ENST00000486975 IGFALSP35858 605 aa14.54□□□□□ -0.08
CLDN11-207ENST00000486975 MMP12P39900 470 aa14.54□□□□□ -0.08
CLDN11-207ENST00000486975 RGRP47804 291 aa14.54□□□□□ -0.08
CLDN11-207ENST00000486975 AP1S1P61966 158 aa14.54□□□□□ -0.08
CLDN11-207ENST00000486975 SLC25A11Q02978 314 aaKnown RBP14.54□□□□□ -0.08
CLDN11-207ENST00000486975 PDE1CQ14123 709 aaPredicted RBP14.54□□□□□ -0.08
CLDN11-207ENST00000486975 CCDC157Q569K6 752 aa14.54□□□□□ -0.08
CLDN11-207ENST00000486975 LRRC73Q5JTD7 316 aa14.54□□□□□ -0.08
CLDN11-207ENST00000486975 ERAP2Q6P179 960 aa14.54□□□□□ -0.08
CLDN11-207ENST00000486975 TMCO3Q6UWJ1 677 aa14.54□□□□□ -0.08
CLDN11-207ENST00000486975 SRLQ86TD4 932 aa14.54□□□□□ -0.08
CLDN11-207ENST00000486975 FAM181AQ8N9Y4 354 aa14.54□□□□□ -0.08
CLDN11-207ENST00000486975 TP53I13Q8NBR0 393 aaPredicted RBP14.54□□□□□ -0.08
CLDN11-207ENST00000486975 FAM71BQ8TC56 605 aa14.54□□□□□ -0.08
CLDN11-207ENST00000486975 CPLX3Q8WVH0 158 aa14.54□□□□□ -0.08
CLDN11-207ENST00000486975 CSPG4P5Q96PW8 444 aa14.54□□□□□ -0.08
CLDN11-207ENST00000486975 DUSP23Q9BVJ7 150 aa14.54□□□□□ -0.08
CLDN11-207ENST00000486975 NUP85Q9BW27 656 aa14.54□□□□□ -0.08
CLDN11-207ENST00000486975 CINPQ9BW66 212 aaPredicted RBP14.54□□□□□ -0.08
CLDN11-207ENST00000486975 XPO4Q9C0E2 1151 aaKnown RBP14.54□□□□□ -0.08
CLDN11-207ENST00000486975 USP29Q9HBJ7 922 aa14.54□□□□□ -0.08
CLDN11-207ENST00000486975 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms