RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 DSC2Q02487 901 aa18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 MBTPS1Q14703 1052 aa18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 TRIP4Q15650 581 aaPredicted RBP18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 PIWIL4Q7Z3Z4 852 aaKnown RBP18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 TXNDC5Q8NBS9 432 aaKnown RBP18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 PABPC5Q96DU9 382 aaKnown RBP18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 PPP1R36Q96LQ0 422 aa18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 FAM193BQ96PV7 902 aaPredicted RBP18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 NCKIPSDQ9NZQ3 722 aa18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 POMPQ9Y244 141 aa18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 TRIM17Q9Y577 477 aa18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 DOCK4Q8N1I0 1966 aa18.13■□□□□ 0.49
PDLIM7-207ENST00000486828 RGSL1A5PLK6 1076 aa18.12■□□□□ 0.49
PDLIM7-207ENST00000486828 TADA2AO75478 443 aa18.12■□□□□ 0.49
PDLIM7-207ENST00000486828 SORBS2O94875 1100 aaKnown RBP18.12■□□□□ 0.49
PDLIM7-207ENST00000486828 ATP5F1P24539 256 aaPredicted RBP18.12■□□□□ 0.49
PDLIM7-207ENST00000486828 YWHAQP27348 245 aa18.12■□□□□ 0.49
PDLIM7-207ENST00000486828 MTTPP55157 894 aa18.12■□□□□ 0.49
PDLIM7-207ENST00000486828 CTXN3Q4LDR2 81 aa18.12■□□□□ 0.49
PDLIM7-207ENST00000486828 GALNT7Q86SF2 657 aa18.12■□□□□ 0.49
PDLIM7-207ENST00000486828 RNF180Q86T96 592 aa18.12■□□□□ 0.49
PDLIM7-207ENST00000486828 SETD3Q86TU7 594 aaPredicted RBP18.12■□□□□ 0.49
PDLIM7-207ENST00000486828 CCNYL1Q8N7R7 359 aa18.12■□□□□ 0.49
PDLIM7-207ENST00000486828 KDM1BQ8NB78 822 aa18.12■□□□□ 0.49
PDLIM7-207ENST00000486828 RP9Q8TA86 221 aaKnown RBP18.12■□□□□ 0.49
PDLIM7-207ENST00000486828 PSMG2Q969U7 264 aa18.12■□□□□ 0.49
PDLIM7-207ENST00000486828 TADA1Q96BN2 335 aa18.12■□□□□ 0.49
PDLIM7-207ENST00000486828 OLFM1Q99784 485 aa18.12■□□□□ 0.49
PDLIM7-207ENST00000486828 UNKQ9C0B0 810 aaKnown RBP18.12■□□□□ 0.49
PDLIM7-207ENST00000486828 OLA1Q9NTK5 396 aaKnown RBP18.12■□□□□ 0.49
PDLIM7-207ENST00000486828 MIA3Q5JRA6 1907 aa18.12■□□□□ 0.49
PDLIM7-207ENST00000486828 EIF4E1BA6NMX2 242 aaKnown RBP18.11■□□□□ 0.49
PDLIM7-207ENST00000486828 PRMT2P55345 433 aa18.11■□□□□ 0.49
PDLIM7-207ENST00000486828 CSHL1Q14406 222 aa18.11■□□□□ 0.49
PDLIM7-207ENST00000486828 FAM83EQ2M2I3 478 aa18.11■□□□□ 0.49
PDLIM7-207ENST00000486828 ZNF789Q5FWF6 425 aa18.11■□□□□ 0.49
PDLIM7-207ENST00000486828 TECRLQ5HYJ1 363 aa18.11■□□□□ 0.49
PDLIM7-207ENST00000486828 FBXL22Q6P050 247 aa18.11■□□□□ 0.49
PDLIM7-207ENST00000486828 SNX32Q86XE0 403 aa18.11■□□□□ 0.49
PDLIM7-207ENST00000486828 HPS6Q86YV9 775 aa18.11■□□□□ 0.49
PDLIM7-207ENST00000486828 TTC9BQ8N6N2 239 aa18.11■□□□□ 0.49
PDLIM7-207ENST00000486828 ATAD1Q8NBU5 361 aa18.11■□□□□ 0.49
PDLIM7-207ENST00000486828 OR13J1Q8NGT2 312 aa18.11■□□□□ 0.49
PDLIM7-207ENST00000486828 GPR152Q8TDT2 470 aa18.11■□□□□ 0.49
PDLIM7-207ENST00000486828 IGSF8Q969P0 613 aa18.11■□□□□ 0.49
PDLIM7-207ENST00000486828 FBXO32Q969P5 355 aa18.11■□□□□ 0.49
PDLIM7-207ENST00000486828 CCDC124Q96CT7 223 aaKnown RBP18.11■□□□□ 0.49
PDLIM7-207ENST00000486828 NDNQ99608 321 aa18.11■□□□□ 0.49
PDLIM7-207ENST00000486828 POMKQ9H5K3 350 aa18.11■□□□□ 0.49
PDLIM7-207ENST00000486828 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.11■□□□□ 0.492e-6■■■■□ 24.3
PDLIM7-207ENST00000486828 DRGXA6NNA5 263 aa18.11■□□□□ 0.49
PDLIM7-207ENST00000486828 SLC7A4O43246 635 aa18.11■□□□□ 0.49
PDLIM7-207ENST00000486828 DSG1Q02413 1049 aa18.11■□□□□ 0.49
PDLIM7-207ENST00000486828 MRPL58Q14197 206 aaKnown RBP18.11■□□□□ 0.49
PDLIM7-207ENST00000486828 IHHQ14623 411 aa18.11■□□□□ 0.49
PDLIM7-207ENST00000486828 SLC14A2Q15849 920 aa18.11■□□□□ 0.49
PDLIM7-207ENST00000486828 MAP3K21Q5TCX8 1036 aa18.11■□□□□ 0.49
PDLIM7-207ENST00000486828 RAP1GAP2Q684P5 730 aa18.11■□□□□ 0.49
PDLIM7-207ENST00000486828 ZNF280DQ6N043 979 aa18.11■□□□□ 0.49
PDLIM7-207ENST00000486828 ZNF354CQ86Y25 554 aa18.11■□□□□ 0.49
PDLIM7-207ENST00000486828 SLC26A7Q8TE54 656 aa18.11■□□□□ 0.49
PDLIM7-207ENST00000486828 PYDC1Q8WXC3 89 aa18.11■□□□□ 0.49
PDLIM7-207ENST00000486828 SGF29Q96ES7 293 aa18.11■□□□□ 0.49
PDLIM7-207ENST00000486828 TSPAN17Q96FV3 270 aa18.11■□□□□ 0.49
PDLIM7-207ENST00000486828 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.11■□□□□ 0.498e-9■■■■□ 19.6
PDLIM7-207ENST00000486828 PRPF19Q9UMS4 504 aaKnown RBP18.11■□□□□ 0.49
PDLIM7-207ENST00000486828 MROH6A6NGR9 719 aa18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 OR6C75A6NL08 312 aa18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 BUD23O43709 281 aaKnown RBP18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 RTN3O95197 1032 aaPredicted RBP18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 TBX18O95935 607 aa18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 JUNP05412 331 aaKnown RBP18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 PFKPQ01813 784 aa18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 IL10RBQ08334 325 aa18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 CYLC2Q14093 348 aaPredicted RBP18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 LBRQ14739 615 aaKnown RBP18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 HERC3Q15034 1050 aa18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 PDCD2Q16342 344 aaPredicted RBP18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 AGAP9Q5VTM2 703 aa18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 CAPRIN2Q6IMN6 1127 aaKnown RBP18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 C16orf89Q6UX73 402 aa18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 IZUMO2Q6UXV1 221 aa18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 TRIM67Q6ZTA4 783 aa18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 DHDDSQ86SQ9 333 aa18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 MIB1Q86YT6 1006 aa18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 CILP2Q8IUL8 1156 aa18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 ARRDC2Q8TBH0 407 aa18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 PXYLP1Q8TE99 480 aa18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 CCDC126Q96EE4 140 aa18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 MAELQ96JY0 434 aaKnown RBP18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 MFSD1Q9H3U5 465 aa18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 TLR8Q9NR97 1041 aaKnown RBP18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 MARCH2Q9P0N8 246 aa18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 TRPC5OSA6NMA1 111 aa18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 AIM2O14862 343 aa18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 RAMP2O60895 175 aa18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 IGLV3-27P01718 113 aa18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 LTA4HP09960 611 aaKnown RBP18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 CD1EP15812 388 aa18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 NUDT2P50583 147 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms