RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 PYHIN1Q6K0P9 492 aa8.82□□□□□ -1
GABRE-209ENST00000486255 USP49Q70CQ1 688 aa8.82□□□□□ -1
GABRE-209ENST00000486255 TBC1D16Q8TBP0 767 aa8.82□□□□□ -1
GABRE-209ENST00000486255 MCOLN3Q8TDD5 553 aa8.82□□□□□ -1
GABRE-209ENST00000486255 SLC5A5Q92911 643 aa8.82□□□□□ -1
GABRE-209ENST00000486255 TMEM159Q96B96 161 aa8.82□□□□□ -1
GABRE-209ENST00000486255 C11orf24Q96F05 449 aaPredicted RBP8.82□□□□□ -1
GABRE-209ENST00000486255 FCRL4Q96PJ5 515 aa8.82□□□□□ -1
GABRE-209ENST00000486255 BTBD9Q96Q07 612 aa8.82□□□□□ -1
GABRE-209ENST00000486255 TRNT1Q96Q11 434 aaKnown RBP8.82□□□□□ -1
GABRE-209ENST00000486255 KCNS3Q9BQ31 491 aa8.82□□□□□ -1
GABRE-209ENST00000486255 IL25Q9H293 177 aa8.82□□□□□ -1
GABRE-209ENST00000486255 INTS10Q9NVR2 710 aaKnown RBP8.82□□□□□ -1
GABRE-209ENST00000486255 MAT2BQ9NZL9 334 aa8.82□□□□□ -1
GABRE-209ENST00000486255 UPB1Q9UBR1 384 aa8.82□□□□□ -1
GABRE-209ENST00000486255 FBXL21Q9UKT6 434 aa8.82□□□□□ -1
GABRE-209ENST00000486255 PRPF19Q9UMS4 504 aaKnown RBP8.82□□□□□ -1
GABRE-209ENST00000486255 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.82□□□□□ -1
GABRE-209ENST00000486255 PRH1P02810 166 aa8.82□□□□□ -1
GABRE-209ENST00000486255 MNDAP41218 407 aa8.82□□□□□ -1
GABRE-209ENST00000486255 E2F2Q14209 437 aa8.82□□□□□ -1
GABRE-209ENST00000486255 PSMD5Q16401 504 aa8.82□□□□□ -1
GABRE-209ENST00000486255 C6orf52Q5T4I8 152 aa8.82□□□□□ -1
GABRE-209ENST00000486255 CXorf57Q6NSI4 855 aaKnown RBP8.82□□□□□ -1
GABRE-209ENST00000486255 CNSTQ6PJW8 725 aa8.82□□□□□ -1
GABRE-209ENST00000486255 AFTPHQ6ULP2 937 aa8.82□□□□□ -1
GABRE-209ENST00000486255 HTR3CQ8WXA8 447 aa8.82□□□□□ -1
GABRE-209ENST00000486255 GFM1Q96RP9 751 aaKnown RBP8.82□□□□□ -1
GABRE-209ENST00000486255 SLC6A15Q9H2J7 730 aa8.82□□□□□ -1
GABRE-209ENST00000486255 CATSPERZQ9NTU4 200 aa8.82□□□□□ -1
GABRE-209ENST00000486255 GGA3Q9NZ52 723 aa8.82□□□□□ -1
GABRE-209ENST00000486255 VPS28Q9UK41 221 aa8.82□□□□□ -1
GABRE-209ENST00000486255 RPL26L1Q9UNX3 145 aaKnown RBP8.82□□□□□ -1
GABRE-209ENST00000486255 RNASEH1O60930 286 aaKnown RBP8.81□□□□□ -1
GABRE-209ENST00000486255 USP12O75317 370 aa8.81□□□□□ -1
GABRE-209ENST00000486255 SH3BGRLO75368 114 aa8.81□□□□□ -1
GABRE-209ENST00000486255 LTA4HP09960 611 aaKnown RBP8.81□□□□□ -1
GABRE-209ENST00000486255 ZNF12P17014 697 aa8.81□□□□□ -1
GABRE-209ENST00000486255 MYBPC3Q14896 1274 aa8.81□□□□□ -1
GABRE-209ENST00000486255 ACAP2Q15057 778 aa8.81□□□□□ -1
GABRE-209ENST00000486255 PRR23CQ6ZRP0 262 aa8.81□□□□□ -1
GABRE-209ENST00000486255 TMEM110Q86TL2 294 aa8.81□□□□□ -1
GABRE-209ENST00000486255 ZNF354BQ96LW1 612 aa8.81□□□□□ -1
GABRE-209ENST00000486255 AP1S3Q96PC3 154 aa8.81□□□□□ -1
GABRE-209ENST00000486255 RTKNQ9BST9 563 aa8.81□□□□□ -1
GABRE-209ENST00000486255 RBM22Q9NW64 420 aaKnown RBP eCLIP8.81□□□□□ -14e-11■■■■■ 36.4
GABRE-209ENST00000486255 HPF1Q9NWY4 346 aa8.81□□□□□ -1
GABRE-209ENST00000486255 CNTNAP5Q8WYK1 1306 aa8.81□□□□□ -1
GABRE-209ENST00000486255 MAGEB3O15480 346 aa8.81□□□□□ -1
GABRE-209ENST00000486255 HNF4AP41235 474 aa8.81□□□□□ -1
GABRE-209ENST00000486255 SCN1BQ07699 218 aa8.81□□□□□ -1
GABRE-209ENST00000486255 GRB10Q13322 594 aa8.81□□□□□ -1
GABRE-209ENST00000486255 BOP1Q14137 746 aaKnown RBP8.81□□□□□ -1
GABRE-209ENST00000486255 SEZ6Q53EL9 994 aa8.81□□□□□ -1
GABRE-209ENST00000486255 RBM20Q5T481 1227 aaKnown RBP8.81□□□□□ -1
GABRE-209ENST00000486255 TXNDC11Q6PKC3 985 aa8.81□□□□□ -1
GABRE-209ENST00000486255 TAMM41Q96BW9 452 aa8.81□□□□□ -1
GABRE-209ENST00000486255 TMEM176AQ96HP8 235 aa8.81□□□□□ -1
GABRE-209ENST00000486255 FAM126AQ9BYI3 521 aaPredicted RBP8.81□□□□□ -1
GABRE-209ENST00000486255 ZNF350Q9GZX5 532 aa8.81□□□□□ -1
GABRE-209ENST00000486255 SEMA6BQ9H3T3 888 aa8.81□□□□□ -1
GABRE-209ENST00000486255 KLQ9UEF7 1012 aa8.81□□□□□ -1
GABRE-209ENST00000486255 TRHDEQ9UKU6 1024 aa8.81□□□□□ -1
GABRE-209ENST00000486255 ST3GAL5Q9UNP4 418 aa8.81□□□□□ -1
GABRE-209ENST00000486255 PLK4O00444 970 aa8.81□□□□□ -1
GABRE-209ENST00000486255 RARAP10276 462 aa8.81□□□□□ -1
GABRE-209ENST00000486255 MAGEA12P43365 314 aa8.81□□□□□ -1
GABRE-209ENST00000486255 MTMR2Q13614 643 aa8.81□□□□□ -1
GABRE-209ENST00000486255 PTGES3Q15185 160 aaKnown RBP8.81□□□□□ -1
GABRE-209ENST00000486255 SPAG16Q8N0X2 631 aa8.81□□□□□ -1
GABRE-209ENST00000486255 FBXL16Q8N461 479 aa8.81□□□□□ -1
GABRE-209ENST00000486255 OR52K2Q8NGK3 314 aa8.81□□□□□ -1
GABRE-209ENST00000486255 OR4A15Q8NGL6 344 aa8.81□□□□□ -1
GABRE-209ENST00000486255 ATL1Q8WXF7 558 aa8.81□□□□□ -1
GABRE-209ENST00000486255 DNAJC1Q96KC8 554 aaKnown RBP8.81□□□□□ -1
GABRE-209ENST00000486255 QRFPRQ96P65 431 aa8.81□□□□□ -1
GABRE-209ENST00000486255 CHIAQ9BZP6 476 aa8.81□□□□□ -1
GABRE-209ENST00000486255 MED11Q9P086 117 aa8.81□□□□□ -1
GABRE-209ENST00000486255 SALL1Q9NSC2 1324 aa8.81□□□□□ -1
GABRE-209ENST00000486255 LAMB4A4D0S4 1761 aa8.81□□□□□ -1
GABRE-209ENST00000486255 A0A087WZ62 844 aa8.81□□□□□ -1
GABRE-209ENST00000486255 CBX4O00257 560 aa8.81□□□□□ -1
GABRE-209ENST00000486255 MSH4O15457 936 aa8.81□□□□□ -1
GABRE-209ENST00000486255 SGTAO43765 313 aa8.81□□□□□ -1
GABRE-209ENST00000486255 GRIA4P48058 902 aa8.81□□□□□ -1
GABRE-209ENST00000486255 SCNN1BP51168 640 aa8.81□□□□□ -1
GABRE-209ENST00000486255 TOMM20Q15388 145 aa8.81□□□□□ -1
GABRE-209ENST00000486255 CYP2A13Q16696 494 aa8.81□□□□□ -1
GABRE-209ENST00000486255 C15orf59Q2T9L4 293 aaPredicted RBP8.81□□□□□ -1
GABRE-209ENST00000486255 PIWIL2Q8TC59 973 aaKnown RBP8.81□□□□□ -1
GABRE-209ENST00000486255 ING5Q8WYH8 240 aa8.81□□□□□ -1
GABRE-209ENST00000486255 KAT5Q92993 513 aa8.81□□□□□ -1
GABRE-209ENST00000486255 SENP6Q9GZR1 1112 aaPredicted RBP8.81□□□□□ -1
GABRE-209ENST00000486255 ALG9Q9H6U8 611 aa8.81□□□□□ -1
GABRE-209ENST00000486255 KLK14Q9P0G3 267 aa8.81□□□□□ -1
GABRE-209ENST00000486255 ARHGAP20Q9P2F6 1191 aa8.81□□□□□ -1
GABRE-209ENST00000486255 ADAM28Q9UKQ2 775 aa8.81□□□□□ -1
GABRE-209ENST00000486255 TNPO3Q9Y5L0 923 aaKnown RBP8.81□□□□□ -1
GABRE-209ENST00000486255 RGPD2P0DJD1 1756 aa8.81□□□□□ -1
GABRE-209ENST00000486255 RIC1Q4ADV7 1423 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms