RNA–Protein interactions for RNA: ENST00000485758.1

TPRKB-208, Transcript of TP53RK binding protein, human

TSL 2

Gene TPRKB, Length 730 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPRKB-208	ENST00000485758	TSPAN11	A1L157	253 aa		10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	MACROD2	A1Z1Q3	448 aa		10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	MATN3	O15232	486 aa		10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	SPINT1	O43278	529 aa		10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	RNGTT	O60942	597 aa	Known RBP	10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	ZRANB2	O95218	330 aa	Known RBP eCLIP	10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	SYP	P08247	313 aa		10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	CR2	P20023	1033 aa		10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	CTNNA2	P26232	953 aa		10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	SERPINA4	P29622	427 aa		10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	NUDT1	P36639	197 aa		10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	MMP13	P45452	471 aa		10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	AFF3	P51826	1226 aa	Known RBP	10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	AP1S1	P61966	158 aa		10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	CCZ1B	P86790	482 aa		10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	CCZ1	P86791	482 aa	Predicted RBP	10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	FOXC1	Q12948	553 aa		10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	HNRNPD	Q14103	355 aa	Known RBP	10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	TFDP2	Q14188	446 aa		10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	TFDP3	Q5H9I0	405 aa		10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	MARC1	Q5VT66	337 aa		10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	PRPF39	Q86UA1	669 aa	Known RBP	10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	HORMAD1	Q86X24	394 aa		10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	PGBD5	Q8N414	524 aa		10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	TEX26	Q8N6G2	289 aa		10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	HCAR2	Q8TDS4	363 aa		10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	ZNF641	Q96N77	438 aa	Predicted RBP	10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	SLC6A18	Q96N87	628 aa		10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	NUDCD1	Q96RS6	583 aa		10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	TSGA10	Q9BZW7	698 aa		10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	SUV39H2	Q9H5I1	410 aa		10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	ATP13A3	Q9H7F0	1226 aa		10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	FSCN3	Q9NQT6	498 aa		10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	CDV3	Q9UKY7	258 aa	Known RBP	10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	ZFR2	Q9UPR6	939 aa	Known RBP	10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	DMTF1	Q9Y222	760 aa		10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	HEY1	Q9Y5J3	304 aa		10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	ASCC3	Q8N3C0	2202 aa	Known RBP	10.64	□□□□□ -0.71
TPRKB-208	ENST00000485758	CCDC66	A2RUB6	948 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	CDX4	O14627	284 aa	Predicted RBP	10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	PPP1R12A	O14974	1030 aa	Predicted RBP	10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	TSPAN6	O43657	245 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	NRDC	O43847	1150 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	CST8	O60676	142 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	GJB3	O75712	270 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	PCDH8	O95206	1070 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	KRT10	P13645	584 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	TIMP2	P16035	220 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	SDHB	P21912	280 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	MAT2A	P31153	395 aa	Known RBP	10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	GRIA4	P48058	902 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	SMCP	P49901	116 aa	Predicted RBP	10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	SCNN1B	P51168	640 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	SUOX	P51687	545 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	MAX	P61244	160 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	DYNLT1	P63172	113 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	RACK1	P63244	317 aa	Known RBP	10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	BCL2L1	Q07817	233 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	PPID	Q08752	370 aa	Known RBP	10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	GRIK2	Q13002	908 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	TEAD4	Q15561	434 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	PPP2R5E	Q16537	467 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	RSPO4	Q2I0M5	234 aa	Predicted RBP	10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	ZNF284	Q2VY69	593 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	TMEM259	Q4ZIN3	620 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	SETMAR	Q53H47	684 aa	Predicted RBP	10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	RALGPS1	Q5JS13	557 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	STPG1	Q5TH74	334 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	KAZN	Q674X7	775 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	NAPEPLD	Q6IQ20	393 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	KIAA1161	Q6NSJ0	714 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	BRAT1	Q6PJG6	821 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	NPNT	Q6UXI9	565 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	TTC7B	Q86TV6	843 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	NT5DC3	Q86UY8	548 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	ZSCAN30	Q86W11	494 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	CAMK1D	Q8IU85	385 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	CCDC50	Q8IVM0	306 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	CCDC13	Q8IYE1	715 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	RCOR2	Q8IZ40	523 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	SYCE1	Q8N0S2	351 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	RNF10	Q8N5U6	811 aa	Known RBP	10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	CCNY	Q8ND76	341 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	ECHDC3	Q96DC8	303 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	SERAC1	Q96JX3	654 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	NSMCE3	Q96MG7	304 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	OLFM3	Q96PB7	478 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	ZDHHC5	Q9C0B5	715 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	NT5M	Q9NPB1	228 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	TMEM9B	Q9NQ34	198 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	HAUS2	Q9NVX0	235 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	AMACR	Q9UHK6	382 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	AMFR	Q9UKV5	643 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	ITM2B	Q9Y287	266 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	CAPN6	Q9Y6Q1	641 aa		10.63	□□□□□ -0.71
TPRKB-208	ENST00000485758	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	10.62	□□□□□ -0.71
TPRKB-208	ENST00000485758	TTC24	A2A3L6	582 aa	Predicted RBP	10.62	□□□□□ -0.71
TPRKB-208	ENST00000485758	UPK3BL1	B0FP48	263 aa		10.62	□□□□□ -0.71
TPRKB-208	ENST00000485758	UPK3BL2	E5RIL1	263 aa		10.62	□□□□□ -0.71
TPRKB-208	ENST00000485758	NEMP1	O14524	444 aa		10.62	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms