RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 GUSBP11Q6P575 273 aa17.32■□□□□ 0.36
SMC4-216ENST00000485645 MACC1Q6ZN28 852 aa17.32■□□□□ 0.36
SMC4-216ENST00000485645 EFL1Q7Z2Z2 1120 aaKnown RBP17.32■□□□□ 0.36
SMC4-216ENST00000485645 LSMEM2Q8N112 164 aa17.32■□□□□ 0.36
SMC4-216ENST00000485645 CELF6Q96J87 481 aaKnown RBP17.32■□□□□ 0.36
SMC4-216ENST00000485645 TBATAQ96M53 351 aa17.32■□□□□ 0.36
SMC4-216ENST00000485645 BBC3Q96PG8 261 aaPredicted RBP17.32■□□□□ 0.36
SMC4-216ENST00000485645 SYT11Q9BT88 431 aa17.32■□□□□ 0.36
SMC4-216ENST00000485645 NAT10Q9H0A0 1025 aaKnown RBP17.32■□□□□ 0.36
SMC4-216ENST00000485645 TCEAL2Q9H3H9 227 aaPredicted RBP17.32■□□□□ 0.36
SMC4-216ENST00000485645 DHX35Q9H5Z1 703 aaKnown RBP17.32■□□□□ 0.36
SMC4-216ENST00000485645 PDFQ9HBH1 243 aa17.32■□□□□ 0.36
SMC4-216ENST00000485645 ARHGAP42A6NI28 874 aa17.31■□□□□ 0.36
SMC4-216ENST00000485645 EIF3CLB5ME19 914 aaKnown RBP17.31■□□□□ 0.36
SMC4-216ENST00000485645 J3KR12 359 aa17.31■□□□□ 0.36
SMC4-216ENST00000485645 EEF2KO00418 725 aaKnown RBP17.31■□□□□ 0.36
SMC4-216ENST00000485645 DAPK3O43293 454 aa17.31■□□□□ 0.36
SMC4-216ENST00000485645 PRAMEF11O60813 436 aa17.31■□□□□ 0.36
SMC4-216ENST00000485645 GCATO75600 419 aa17.31■□□□□ 0.36
SMC4-216ENST00000485645 MPOP05164 745 aa17.31■□□□□ 0.36
SMC4-216ENST00000485645 ANXA6P08133 673 aa17.31■□□□□ 0.36
SMC4-216ENST00000485645 TGM2P21980 687 aa17.31■□□□□ 0.36
SMC4-216ENST00000485645 RPIAP49247 311 aa17.31■□□□□ 0.36
SMC4-216ENST00000485645 GABREP78334 506 aa17.31■□□□□ 0.36
SMC4-216ENST00000485645 PPARDQ03181 441 aa17.31■□□□□ 0.36
SMC4-216ENST00000485645 CCDC173Q0VFZ6 552 aa17.31■□□□□ 0.36
SMC4-216ENST00000485645 C1orf61Q13536 156 aa17.31■□□□□ 0.36
SMC4-216ENST00000485645 LRRC14Q15048 493 aa17.31■□□□□ 0.36
SMC4-216ENST00000485645 IRF4Q15306 451 aa17.31■□□□□ 0.36
SMC4-216ENST00000485645 UGP2Q16851 508 aa17.31■□□□□ 0.36
SMC4-216ENST00000485645 ERMARDQ5T6L9 678 aa17.31■□□□□ 0.36
SMC4-216ENST00000485645 PLEKHA7Q6IQ23 1121 aa17.31■□□□□ 0.36
SMC4-216ENST00000485645 ERAP2Q6P179 960 aa17.31■□□□□ 0.36
SMC4-216ENST00000485645 TPCN2Q8NHX9 752 aa17.31■□□□□ 0.36
SMC4-216ENST00000485645 ZNF578Q96N58 590 aaPredicted RBP17.31■□□□□ 0.36
SMC4-216ENST00000485645 ZNF641Q96N77 438 aaPredicted RBP17.31■□□□□ 0.36
SMC4-216ENST00000485645 EIF3CQ99613 913 aaKnown RBP17.31■□□□□ 0.36
SMC4-216ENST00000485645 LRRC61Q9BV99 259 aa17.31■□□□□ 0.36
SMC4-216ENST00000485645 BOCQ9BWV1 1114 aa17.31■□□□□ 0.36
SMC4-216ENST00000485645 SLC39A8Q9C0K1 460 aa17.31■□□□□ 0.36
SMC4-216ENST00000485645 PRORYQ9H606 182 aa17.31■□□□□ 0.36
SMC4-216ENST00000485645 RTN4Q9NQC3 1192 aaKnown RBP17.31■□□□□ 0.36
SMC4-216ENST00000485645 PCSK1NQ9UHG2 260 aa17.31■□□□□ 0.36
SMC4-216ENST00000485645 PNMA8BQ9ULN7 279 aaPredicted RBP17.31■□□□□ 0.36
SMC4-216ENST00000485645 COQ6Q9Y2Z9 468 aa17.31■□□□□ 0.36
SMC4-216ENST00000485645 PTPRQQ9UMZ3 2332 aa17.3■□□□□ 0.36
SMC4-216ENST00000485645 SHROOM3Q8TF72 1996 aa17.3■□□□□ 0.36
SMC4-216ENST00000485645 TSPAN11A1L157 253 aa17.3■□□□□ 0.36
SMC4-216ENST00000485645 LRRC53A6NM62 1247 aa17.3■□□□□ 0.36
SMC4-216ENST00000485645 TMEM110-MUSTN1A8MSY1 372 aa17.3■□□□□ 0.36
SMC4-216ENST00000485645 LMO7DNF2Z398 122 aa17.3■□□□□ 0.36
SMC4-216ENST00000485645 MUSKO15146 869 aa17.3■□□□□ 0.36
SMC4-216ENST00000485645 ATMINO43313 823 aaPredicted RBP17.3■□□□□ 0.36
SMC4-216ENST00000485645 RNF8O76064 485 aa17.3■□□□□ 0.36
SMC4-216ENST00000485645 LSSP48449 732 aa17.3■□□□□ 0.36
SMC4-216ENST00000485645 PEX5P50542 639 aa17.3■□□□□ 0.36
SMC4-216ENST00000485645 PAPOLAP51003 745 aaKnown RBP17.3■□□□□ 0.36
SMC4-216ENST00000485645 BLKP51451 505 aa17.3■□□□□ 0.36
SMC4-216ENST00000485645 CA9Q16790 459 aa17.3■□□□□ 0.36
SMC4-216ENST00000485645 C6orf132Q5T0Z8 1188 aa17.3■□□□□ 0.36
SMC4-216ENST00000485645 BRAT1Q6PJG6 821 aa17.3■□□□□ 0.36
SMC4-216ENST00000485645 ZNF248Q8NDW4 579 aa17.3■□□□□ 0.36
SMC4-216ENST00000485645 TUBGCP5Q96RT8 1024 aa17.3■□□□□ 0.36
SMC4-216ENST00000485645 UBL7Q96S82 380 aaPredicted RBP17.3■□□□□ 0.36
SMC4-216ENST00000485645 SNRNP25Q9BV90 132 aaKnown RBP17.3■□□□□ 0.36
SMC4-216ENST00000485645 POLR1BQ9H9Y6 1135 aa17.3■□□□□ 0.36
SMC4-216ENST00000485645 PCDH12Q9NPG4 1184 aa17.3■□□□□ 0.36
SMC4-216ENST00000485645 RAI2Q9Y5P3 530 aa17.3■□□□□ 0.36
SMC4-216ENST00000485645 RP1P56715 2156 aa17.29■□□□□ 0.36
SMC4-216ENST00000485645 SMTNL1A8MU46 457 aa17.29■□□□□ 0.36
SMC4-216ENST00000485645 YY2O15391 372 aa17.29■□□□□ 0.36
SMC4-216ENST00000485645 LZTS3O60299 673 aaPredicted RBP17.29■□□□□ 0.36
SMC4-216ENST00000485645 BUB1BO60566 1050 aaPredicted RBP17.29■□□□□ 0.36
SMC4-216ENST00000485645 PALMO75781 387 aa17.29■□□□□ 0.36
SMC4-216ENST00000485645 C6P13671 934 aa17.29■□□□□ 0.36
SMC4-216ENST00000485645 TSHRP16473 764 aa17.29■□□□□ 0.36
SMC4-216ENST00000485645 HTR1BP28222 390 aa17.29■□□□□ 0.36
SMC4-216ENST00000485645 CSNK1DP48730 415 aa17.29■□□□□ 0.36
SMC4-216ENST00000485645 PCBP4P57723 403 aaKnown RBP17.29■□□□□ 0.36
SMC4-216ENST00000485645 ASIC2Q16515 512 aa17.29■□□□□ 0.36
SMC4-216ENST00000485645 ISXQ2M1V0 245 aa17.29■□□□□ 0.36
SMC4-216ENST00000485645 WSCD2Q2TBF2 565 aa17.29■□□□□ 0.36
SMC4-216ENST00000485645 ANO6Q4KMQ2 910 aa17.29■□□□□ 0.36
SMC4-216ENST00000485645 FILIP1LQ4L180 1135 aa17.29■□□□□ 0.36
SMC4-216ENST00000485645 ESRP1Q6NXG1 681 aaKnown RBP17.29■□□□□ 0.36
SMC4-216ENST00000485645 RFX8Q6ZV50 586 aa17.29■□□□□ 0.36
SMC4-216ENST00000485645 CAMK1DQ8IU85 385 aa17.29■□□□□ 0.36
SMC4-216ENST00000485645 SPACA3Q8IXA5 215 aa17.29■□□□□ 0.36
SMC4-216ENST00000485645 SLC35F3Q8IY50 421 aa17.29■□□□□ 0.36
SMC4-216ENST00000485645 FSTL5Q8N475 847 aaPredicted RBP17.29■□□□□ 0.36
SMC4-216ENST00000485645 ARFGAP1Q8N6T3 406 aa17.29■□□□□ 0.36
SMC4-216ENST00000485645 NAT6Q93015 286 aa17.29■□□□□ 0.36
SMC4-216ENST00000485645 GRAMD1AQ96CP6 724 aa17.29■□□□□ 0.36
SMC4-216ENST00000485645 FCRL3Q96P31 734 aaPredicted RBP17.29■□□□□ 0.36
SMC4-216ENST00000485645 KCTD15Q96SI1 283 aaPredicted RBP17.29■□□□□ 0.36
SMC4-216ENST00000485645 LGMNQ99538 433 aa17.29■□□□□ 0.36
SMC4-216ENST00000485645 CLPBQ9H078 707 aa17.29■□□□□ 0.36
SMC4-216ENST00000485645 HAUS4Q9H6D7 363 aa17.29■□□□□ 0.36
SMC4-216ENST00000485645 ATP13A3Q9H7F0 1226 aa17.29■□□□□ 0.36
SMC4-216ENST00000485645 DOLKQ9UPQ8 538 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms