RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 CDK16Q00536 496 aa17.72■□□□□ 0.43
CHMP3-207ENST00000485465 CST6Q15828 149 aa17.72■□□□□ 0.43
CHMP3-207ENST00000485465 POM121L1PQ3SYA9 428 aa17.72■□□□□ 0.43
CHMP3-207ENST00000485465 RANBP10Q6VN20 620 aa17.72■□□□□ 0.43
CHMP3-207ENST00000485465 ARRDC3Q96B67 414 aa17.72■□□□□ 0.43
CHMP3-207ENST00000485465 TBL1YQ9BQ87 522 aa17.72■□□□□ 0.43
CHMP3-207ENST00000485465 FSD1LQ9BXM9 530 aa17.72■□□□□ 0.43
CHMP3-207ENST00000485465 EPB41L5Q9HCM4 733 aa17.72■□□□□ 0.43
CHMP3-207ENST00000485465 GRHL1Q9NZI5 618 aa17.72■□□□□ 0.43
CHMP3-207ENST00000485465 DKK3Q9UBP4 350 aa17.72■□□□□ 0.43
CHMP3-207ENST00000485465 ANAPC5Q9UJX4 755 aa17.72■□□□□ 0.43
CHMP3-207ENST00000485465 PCDHB9Q9Y5E1 797 aa17.72■□□□□ 0.43
CHMP3-207ENST00000485465 ATG2BQ96BY7 2078 aa17.71■□□□□ 0.43
CHMP3-207ENST00000485465 VCANP13611 3396 aa17.71■□□□□ 0.43
CHMP3-207ENST00000485465 ESYT3A0FGR9 886 aa17.71■□□□□ 0.43
CHMP3-207ENST00000485465 TSPAN11A1L157 253 aa17.71■□□□□ 0.43
CHMP3-207ENST00000485465 NDC80O14777 642 aa17.71■□□□□ 0.43
CHMP3-207ENST00000485465 MID1O15344 667 aa17.71■□□□□ 0.43
CHMP3-207ENST00000485465 USP12O75317 370 aa17.71■□□□□ 0.43
CHMP3-207ENST00000485465 NDST3O95803 873 aa17.71■□□□□ 0.43
CHMP3-207ENST00000485465 C5AR1P21730 350 aa17.71■□□□□ 0.43
CHMP3-207ENST00000485465 ITGB7P26010 798 aa17.71■□□□□ 0.43
CHMP3-207ENST00000485465 TNNT3P45378 269 aaPredicted RBP17.71■□□□□ 0.43
CHMP3-207ENST00000485465 METAP1P53582 386 aa17.71■□□□□ 0.43
CHMP3-207ENST00000485465 ITGA8P53708 1063 aa17.71■□□□□ 0.43
CHMP3-207ENST00000485465 RPL26P61254 145 aaKnown RBP17.71■□□□□ 0.43
CHMP3-207ENST00000485465 CALCOCO2Q13137 446 aa17.71■□□□□ 0.43
CHMP3-207ENST00000485465 OLIG2Q13516 323 aa17.71■□□□□ 0.43
CHMP3-207ENST00000485465 MORF4L2Q15014 288 aa17.71■□□□□ 0.43
CHMP3-207ENST00000485465 TRADDQ15628 312 aa17.71■□□□□ 0.43
CHMP3-207ENST00000485465 CFAP58Q5T655 872 aa17.71■□□□□ 0.43
CHMP3-207ENST00000485465 NAPEPLDQ6IQ20 393 aa17.71■□□□□ 0.43
CHMP3-207ENST00000485465 HIBCHQ6NVY1 386 aaPredicted RBP17.71■□□□□ 0.43
CHMP3-207ENST00000485465 BRAT1Q6PJG6 821 aa17.71■□□□□ 0.43
CHMP3-207ENST00000485465 MAMSTRQ6ZN01 415 aa17.71■□□□□ 0.43
CHMP3-207ENST00000485465 LINC00523Q86TU6 105 aa17.71■□□□□ 0.43
CHMP3-207ENST00000485465 HOOK3Q86VS8 718 aa17.71■□□□□ 0.43
CHMP3-207ENST00000485465 ZSWIM9Q86XI8 627 aa17.71■□□□□ 0.43
CHMP3-207ENST00000485465 PAF1Q8N7H5 531 aa17.71■□□□□ 0.43
CHMP3-207ENST00000485465 SPOCK2Q92563 424 aa17.71■□□□□ 0.43
CHMP3-207ENST00000485465 PBXIP1Q96AQ6 731 aa17.71■□□□□ 0.43
CHMP3-207ENST00000485465 PPP1R16AQ96I34 528 aa17.71■□□□□ 0.43
CHMP3-207ENST00000485465 MRGPRX1Q96LB2 322 aa17.71■□□□□ 0.43
CHMP3-207ENST00000485465 APOL2Q9BQE5 337 aa17.71■□□□□ 0.43
CHMP3-207ENST00000485465 ADGRE3Q9BY15 652 aa17.71■□□□□ 0.43
CHMP3-207ENST00000485465 SLC6A17Q9H1V8 727 aa17.71■□□□□ 0.43
CHMP3-207ENST00000485465 RPL26L1Q9UNX3 145 aaKnown RBP17.71■□□□□ 0.43
CHMP3-207ENST00000485465 C16orf96A6NNT2 1141 aa17.7■□□□□ 0.42
CHMP3-207ENST00000485465 SMAPO00193 183 aa17.7■□□□□ 0.42
CHMP3-207ENST00000485465 TNFRSF10AO00220 468 aa17.7■□□□□ 0.42
CHMP3-207ENST00000485465 TP73O15350 636 aa17.7■□□□□ 0.42
CHMP3-207ENST00000485465 TMEM63AO94886 807 aa17.7■□□□□ 0.42
CHMP3-207ENST00000485465 CPP00450 1065 aa17.7■□□□□ 0.42
CHMP3-207ENST00000485465 ATXN1LP0C7T5 689 aaKnown RBP17.7■□□□□ 0.42
CHMP3-207ENST00000485465 GABRG2P18507 467 aa17.7■□□□□ 0.42
CHMP3-207ENST00000485465 NDUFV2P19404 249 aa17.7■□□□□ 0.42
CHMP3-207ENST00000485465 HLA-DPA1P20036 260 aa17.7■□□□□ 0.42
CHMP3-207ENST00000485465 ZBTB16Q05516 673 aa17.7■□□□□ 0.42
CHMP3-207ENST00000485465 GALNT3Q14435 633 aa17.7■□□□□ 0.42
CHMP3-207ENST00000485465 SLC1A5Q15758 541 aa17.7■□□□□ 0.42
CHMP3-207ENST00000485465 SIRPB2Q5JXA9 342 aa17.7■□□□□ 0.42
CHMP3-207ENST00000485465 DENND5AQ6IQ26 1287 aa17.7■□□□□ 0.42
CHMP3-207ENST00000485465 PPP1R21Q6ZMI0 780 aa17.7■□□□□ 0.42
CHMP3-207ENST00000485465 BMP8AQ7Z5Y6 402 aa17.7■□□□□ 0.42
CHMP3-207ENST00000485465 SLC25A41Q8N5S1 370 aa17.7■□□□□ 0.42
CHMP3-207ENST00000485465 MCUQ8NE86 351 aa17.7■□□□□ 0.42
CHMP3-207ENST00000485465 LPCAT1Q8NF37 534 aa17.7■□□□□ 0.42
CHMP3-207ENST00000485465 TSTD1Q8NFU3 115 aa17.7■□□□□ 0.42
CHMP3-207ENST00000485465 HMGB4Q8WW32 186 aa17.7■□□□□ 0.42
CHMP3-207ENST00000485465 PIH1D2Q8WWB5 315 aa17.7■□□□□ 0.42
CHMP3-207ENST00000485465 UBXN4Q92575 508 aa17.7■□□□□ 0.42
CHMP3-207ENST00000485465 PRCCQ92733 491 aaPredicted RBP17.7■□□□□ 0.42
CHMP3-207ENST00000485465 SIPA1Q96FS4 1042 aa17.7■□□□□ 0.42
CHMP3-207ENST00000485465 PABPC3Q9H361 631 aaKnown RBP17.7■□□□□ 0.42
CHMP3-207ENST00000485465 EPHX3Q9H6B9 360 aa17.7■□□□□ 0.42
CHMP3-207ENST00000485465 ARNT2Q9HBZ2 717 aa17.7■□□□□ 0.42
CHMP3-207ENST00000485465 DYRK4Q9NR20 520 aa17.7■□□□□ 0.42
CHMP3-207ENST00000485465 GDF3Q9NR23 364 aa17.7■□□□□ 0.42
CHMP3-207ENST00000485465 FAM114A2Q9NRY5 505 aa17.7■□□□□ 0.42
CHMP3-207ENST00000485465 PHTF1Q9UMS5 762 aa17.7■□□□□ 0.42
CHMP3-207ENST00000485465 TECTAO75443 2155 aa17.7■□□□□ 0.42
CHMP3-207ENST00000485465 ALDH1A2O94788 518 aa17.69■□□□□ 0.42
CHMP3-207ENST00000485465 DNTTP04053 509 aa17.69■□□□□ 0.42
CHMP3-207ENST00000485465 TIMP2P16035 220 aa17.69■□□□□ 0.42
CHMP3-207ENST00000485465 GRIA1P42261 906 aa17.69■□□□□ 0.42
CHMP3-207ENST00000485465 CHRNA4P43681 627 aa17.69■□□□□ 0.42
CHMP3-207ENST00000485465 CXCL12P48061 93 aa17.69■□□□□ 0.42
CHMP3-207ENST00000485465 CCR3P51677 355 aa17.69■□□□□ 0.42
CHMP3-207ENST00000485465 EPHB1P54762 984 aa17.69■□□□□ 0.42
CHMP3-207ENST00000485465 POLR2LP62875 67 aaKnown RBP17.69■□□□□ 0.42
CHMP3-207ENST00000485465 SARNPP82979 210 aaKnown RBP17.69■□□□□ 0.42
CHMP3-207ENST00000485465 QPCTQ16769 361 aa17.69■□□□□ 0.42
CHMP3-207ENST00000485465 KIAA1324Q6UXG2 1013 aaKnown RBP17.69■□□□□ 0.42
CHMP3-207ENST00000485465 PARS2Q7L3T8 475 aaKnown RBP17.69■□□□□ 0.42
CHMP3-207ENST00000485465 CACUL1Q86Y37 369 aa17.69■□□□□ 0.42
CHMP3-207ENST00000485465 IFT20Q8IY31 132 aa17.69■□□□□ 0.42
CHMP3-207ENST00000485465 AADATQ8N5Z0 425 aa17.69■□□□□ 0.42
CHMP3-207ENST00000485465 OR52K1Q8NGK4 314 aa17.69■□□□□ 0.42
CHMP3-207ENST00000485465 ART4Q93070 314 aa17.69■□□□□ 0.42
CHMP3-207ENST00000485465 RMDN1Q96DB5 314 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms