RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.51□□□□□ -1.53
PTPN4-210ENST00000485247 PAQR9Q6ZVX9 377 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 RSRC2Q7L4I2 434 aaKnown RBP5.51□□□□□ -1.53
PTPN4-210ENST00000485247 B3GNT8Q7Z7M8 397 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 NECAB1Q8N987 351 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 ZMIZ2Q8NF64 920 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 OR5B17Q8NGF7 314 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 WFIKKN2Q8TEU8 576 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 JAKMIP2Q96AA8 810 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 MOCOSQ96EN8 888 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 SMARCD1Q96GM5 515 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 ANKRD36BP1Q96IX9 119 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 FIZ1Q96SL8 496 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 CALN1Q9BXU9 219 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 NMUR1Q9HB89 426 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 PREBQ9HCU5 417 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 INTS13Q9NVM9 706 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 COMMD8Q9NX08 183 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 DNAJC28Q9NX36 388 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 IMPACTQ9P2X3 320 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 CYTH4Q9UIA0 394 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 RASAL2Q9UJF2 1139 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 GGA2Q9UJY4 613 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 ODF2LQ9ULJ1 636 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 PCDHB10Q9UN67 800 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 DMTF1Q9Y222 760 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 F8P00451 2351 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 ATP8B3O60423 1300 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 CELSR2Q9HCU4 2923 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 A0A1B0GTL3 188 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 EME2A4GXA9 379 aaPredicted RBP5.5□□□□□ -1.53
PTPN4-210ENST00000485247 VWA3AA6NCI4 1184 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 PRAMEF26H0Y7S4 382 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 SLC31A1O15431 190 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 FGF10O15520 208 aaPredicted RBP5.5□□□□□ -1.53
PTPN4-210ENST00000485247 NUAK1O60285 661 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 JAK2O60674 1132 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 TACC1O75410 805 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 PRPF6O94906 941 aaKnown RBP5.5□□□□□ -1.53
PTPN4-210ENST00000485247 IL1BP01584 269 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 TNNC2P02585 160 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 KRT18P05783 430 aaKnown RBP5.5□□□□□ -1.53
PTPN4-210ENST00000485247 MSL3P1P0C860 447 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 IFNGR1P15260 489 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 POLR2EP19388 210 aaKnown RBP5.5□□□□□ -1.53
PTPN4-210ENST00000485247 ITIH1P19827 911 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 C5AR1P21730 350 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 CD70P32970 193 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 DDIT3P35638 169 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 NASPP49321 788 aaPredicted RBP5.5□□□□□ -1.53
PTPN4-210ENST00000485247 ZNF131P52739 623 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 MAP3K7CLP57077 242 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 ST8SIA6P61647 398 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 TNNC1P63316 161 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 YBX1P67809 324 aaKnown RBP5.5□□□□□ -1.53
PTPN4-210ENST00000485247 COG7P83436 770 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 SRSF3P84103 164 aaKnown RBP5.5□□□□□ -1.53
PTPN4-210ENST00000485247 EFEMP1Q12805 493 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 EIF3IQ13347 325 aaKnown RBP5.5□□□□□ -1.53
PTPN4-210ENST00000485247 SSPNQ14714 243 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 DEFB133Q30KQ1 61 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 HNRNPA1L2Q32P51 320 aaKnown RBP5.5□□□□□ -1.53
PTPN4-210ENST00000485247 WDR72Q3MJ13 1102 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 MPPE1Q53F39 396 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 BMP2KLQ5H9B9 411 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 C9orf64Q5T6V5 341 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 GPRIN1Q7Z2K8 1008 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 GPBP1Q86WP2 473 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 HEATR4Q86WZ0 1026 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 FAM114A1Q8IWE2 563 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 FUKQ8N0W3 1084 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 AHI1Q8N157 1196 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 CPXM2Q8N436 756 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 NUP43Q8NFH3 380 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 KLHL6Q8WZ60 621 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 KLK6Q92876 244 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 CDK5RAP3Q96JB5 506 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 SPATA32Q96LK8 384 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 SMOQ99835 787 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 CCDC3Q9BQI4 270 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 MCMBPQ9BTE3 642 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 DCLK3Q9C098 648 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 STRADBQ9C0K7 418 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 PCIF1Q9H4Z3 704 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 NOL6Q9H6R4 1146 aaKnown RBP5.5□□□□□ -1.53
PTPN4-210ENST00000485247 CNTD2Q9H8S5 307 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 TNFRSF12AQ9NP84 129 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 FZD3Q9NPG1 666 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 CASS4Q9NQ75 786 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.5□□□□□ -1.53
PTPN4-210ENST00000485247 NCKIPSDQ9NZQ3 722 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 FOXJ2Q9P0K8 574 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 KLHL14Q9P2G3 628 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 SCML2Q9UQR0 700 aa5.5□□□□□ -1.53
PTPN4-210ENST00000485247 UBE4BO95155 1302 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 CSMD1Q96PZ7 3565 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 KRTAP9-7A8MTY7 169 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 TTC34A8MYJ7 566 aa5.49□□□□□ -1.53
PTPN4-210ENST00000485247 TBCAO75347 108 aaKnown RBP5.49□□□□□ -1.53
PTPN4-210ENST00000485247 DDAH2O95865 285 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms