RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 SDC4P31431 198 aa13.16□□□□□ -0.3
HDAC6-227ENST00000485102 GSCP56915 257 aaPredicted RBP13.16□□□□□ -0.3
HDAC6-227ENST00000485102 YBEYP58557 167 aaPredicted RBP13.16□□□□□ -0.3
HDAC6-227ENST00000485102 ATP11AP98196 1134 aa13.16□□□□□ -0.3
HDAC6-227ENST00000485102 KCNC4Q03721 635 aa13.16□□□□□ -0.3
HDAC6-227ENST00000485102 ELP6Q0PNE2 266 aa13.16□□□□□ -0.3
HDAC6-227ENST00000485102 RAPGEF1Q13905 1077 aa13.16□□□□□ -0.3
HDAC6-227ENST00000485102 FAM72AQ5TYM5 149 aa13.16□□□□□ -0.3
HDAC6-227ENST00000485102 KIAA1614Q5VZ46 1190 aa13.16□□□□□ -0.3
HDAC6-227ENST00000485102 FAM72DQ6L9T8 149 aa13.16□□□□□ -0.3
HDAC6-227ENST00000485102 RWDD4Q6NW29 188 aaKnown RBP13.16□□□□□ -0.3
HDAC6-227ENST00000485102 RAB11FIP2Q7L804 512 aa13.16□□□□□ -0.3
HDAC6-227ENST00000485102 FAM72BQ86X60 149 aa13.16□□□□□ -0.3
HDAC6-227ENST00000485102 FBXO39Q8N4B4 442 aa13.16□□□□□ -0.3
HDAC6-227ENST00000485102 EMC1Q8N766 993 aa13.16□□□□□ -0.3
HDAC6-227ENST00000485102 CXorf40AQ8TE69 158 aa13.16□□□□□ -0.3
HDAC6-227ENST00000485102 RXFP2Q8WXD0 754 aa13.16□□□□□ -0.3
HDAC6-227ENST00000485102 CPA5Q8WXQ8 436 aa13.16□□□□□ -0.3
HDAC6-227ENST00000485102 TMEM159Q96B96 161 aa13.16□□□□□ -0.3
HDAC6-227ENST00000485102 TBC1D31Q96DN5 1066 aa13.16□□□□□ -0.3
HDAC6-227ENST00000485102 TMEM74Q96NL1 305 aa13.16□□□□□ -0.3
HDAC6-227ENST00000485102 EPAS1Q99814 870 aa13.16□□□□□ -0.3
HDAC6-227ENST00000485102 NAT10Q9H0A0 1025 aaKnown RBP13.16□□□□□ -0.3
HDAC6-227ENST00000485102 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.16□□□□□ -0.3
HDAC6-227ENST00000485102 PTPN13Q12923 2485 aa13.16□□□□□ -0.3
HDAC6-227ENST00000485102 LRRK1Q38SD2 2015 aa13.15□□□□□ -0.3
HDAC6-227ENST00000485102 A0A1W2PQM1 296 aa13.15□□□□□ -0.3
HDAC6-227ENST00000485102 TSPAN11A1L157 253 aa13.15□□□□□ -0.3
HDAC6-227ENST00000485102 CFAP69A5D8W1 941 aa13.15□□□□□ -0.3
HDAC6-227ENST00000485102 WASH4PA8MWX3 477 aa13.15□□□□□ -0.3
HDAC6-227ENST00000485102 D6RAR5 112 aa13.15□□□□□ -0.3
HDAC6-227ENST00000485102 F8VZ95 297 aa13.15□□□□□ -0.3
HDAC6-227ENST00000485102 CASC3O15234 703 aaKnown RBP13.15□□□□□ -0.3
HDAC6-227ENST00000485102 RASGRP1O95267 797 aa13.15□□□□□ -0.3
HDAC6-227ENST00000485102 WISP1O95388 367 aa13.15□□□□□ -0.3
HDAC6-227ENST00000485102 IGSF6O95976 241 aa13.15□□□□□ -0.3
HDAC6-227ENST00000485102 ITGB2P05107 769 aa13.15□□□□□ -0.3
HDAC6-227ENST00000485102 MMEP08473 750 aa13.15□□□□□ -0.3
HDAC6-227ENST00000485102 PNLIPP16233 465 aa13.15□□□□□ -0.3
HDAC6-227ENST00000485102 HTR1BP28222 390 aa13.15□□□□□ -0.3
HDAC6-227ENST00000485102 ERCC5P28715 1186 aaPredicted RBP13.15□□□□□ -0.3
HDAC6-227ENST00000485102 SLC5A2P31639 672 aa13.15□□□□□ -0.3
HDAC6-227ENST00000485102 UGT1A5P35504 534 aa13.15□□□□□ -0.3
HDAC6-227ENST00000485102 HDAC4P56524 1084 aa13.15□□□□□ -0.3
HDAC6-227ENST00000485102 GRM3Q14832 879 aa13.15□□□□□ -0.3
HDAC6-227ENST00000485102 LRRC14Q15048 493 aa13.15□□□□□ -0.3
HDAC6-227ENST00000485102 TPD52L1Q16890 204 aaPredicted RBP13.15□□□□□ -0.3
HDAC6-227ENST00000485102 C15orf59Q2T9L4 293 aaPredicted RBP13.15□□□□□ -0.3
HDAC6-227ENST00000485102 WSCD2Q2TBF2 565 aa13.15□□□□□ -0.3
HDAC6-227ENST00000485102 RAB6CQ53S08 254 aa13.15□□□□□ -0.3
HDAC6-227ENST00000485102 ATXN7L2Q5T6C5 722 aaPredicted RBP13.15□□□□□ -0.3
HDAC6-227ENST00000485102 TAF3Q5VWG9 929 aa13.15□□□□□ -0.3
HDAC6-227ENST00000485102 NAA35Q5VZE5 725 aa13.15□□□□□ -0.3
HDAC6-227ENST00000485102 OGFOD3Q6PK18 319 aa13.15□□□□□ -0.3
HDAC6-227ENST00000485102 GKN2Q86XP6 184 aa13.15□□□□□ -0.3
HDAC6-227ENST00000485102 RTL3Q8N8U3 475 aaKnown RBP13.15□□□□□ -0.3
HDAC6-227ENST00000485102 GPR156Q8NFN8 814 aa13.15□□□□□ -0.3
HDAC6-227ENST00000485102 ATL2Q8NHH9 583 aa13.15□□□□□ -0.3
HDAC6-227ENST00000485102 GPT2Q8TD30 523 aa13.15□□□□□ -0.3
HDAC6-227ENST00000485102 GFM1Q96RP9 751 aaKnown RBP13.15□□□□□ -0.3
HDAC6-227ENST00000485102 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.15□□□□□ -0.3
HDAC6-227ENST00000485102 B3GNT4Q9C0J1 378 aa13.15□□□□□ -0.3
HDAC6-227ENST00000485102 STRADBQ9C0K7 418 aa13.15□□□□□ -0.3
HDAC6-227ENST00000485102 RAB6CQ9H0N0 254 aa13.15□□□□□ -0.3
HDAC6-227ENST00000485102 NOL6Q9H6R4 1146 aaKnown RBP13.15□□□□□ -0.3
HDAC6-227ENST00000485102 METTL5Q9NRN9 209 aaKnown RBP13.15□□□□□ -0.3
HDAC6-227ENST00000485102 RABGEF1Q9UJ41 708 aa13.15□□□□□ -0.3
HDAC6-227ENST00000485102 NOCTQ9UK39 431 aaKnown RBP13.15□□□□□ -0.3
HDAC6-227ENST00000485102 APPL1Q9UKG1 709 aa13.15□□□□□ -0.3
HDAC6-227ENST00000485102 DGKBQ9Y6T7 804 aa13.15□□□□□ -0.3
HDAC6-227ENST00000485102 BOD1L1Q8NFC6 3051 aa13.14□□□□□ -0.31
HDAC6-227ENST00000485102 LRP4O75096 1905 aa13.14□□□□□ -0.31
HDAC6-227ENST00000485102 BUB1O43683 1085 aa13.14□□□□□ -0.31
HDAC6-227ENST00000485102 GJB6O95452 261 aa13.14□□□□□ -0.31
HDAC6-227ENST00000485102 CELA2BP08218 269 aaPredicted RBP13.14□□□□□ -0.31
HDAC6-227ENST00000485102 INHBCP55103 352 aa13.14□□□□□ -0.31
HDAC6-227ENST00000485102 CDR2Q01850 454 aa13.14□□□□□ -0.31
HDAC6-227ENST00000485102 ZFP36L1Q07352 338 aaKnown RBP13.14□□□□□ -0.31
HDAC6-227ENST00000485102 NFATC4Q14934 902 aa13.14□□□□□ -0.31
HDAC6-227ENST00000485102 IRF4Q15306 451 aa13.14□□□□□ -0.31
HDAC6-227ENST00000485102 CAMK4Q16566 473 aa13.14□□□□□ -0.31
HDAC6-227ENST00000485102 UGP2Q16851 508 aa13.14□□□□□ -0.31
HDAC6-227ENST00000485102 ALG11Q2TAA5 492 aa13.14□□□□□ -0.31
HDAC6-227ENST00000485102 ZSCAN23Q3MJ62 389 aa13.14□□□□□ -0.31
HDAC6-227ENST00000485102 FOXR1Q6PIV2 292 aa13.14□□□□□ -0.31
HDAC6-227ENST00000485102 RBM43Q6ZSC3 357 aaKnown RBP13.14□□□□□ -0.31
HDAC6-227ENST00000485102 B3GNT8Q7Z7M8 397 aa13.14□□□□□ -0.31
HDAC6-227ENST00000485102 UMODL1-AS1Q8N2C9 162 aa13.14□□□□□ -0.31
HDAC6-227ENST00000485102 EXD3Q8N9H8 876 aa13.14□□□□□ -0.31
HDAC6-227ENST00000485102 KYQ8NBH2 561 aa13.14□□□□□ -0.31
HDAC6-227ENST00000485102 PCDH19Q8TAB3 1148 aa13.14□□□□□ -0.31
HDAC6-227ENST00000485102 CCDC74AQ96AQ1 378 aa13.14□□□□□ -0.31
HDAC6-227ENST00000485102 ZNF641Q96N77 438 aaPredicted RBP13.14□□□□□ -0.31
HDAC6-227ENST00000485102 RBM15Q96T37 977 aaKnown RBP eCLIP13.14□□□□□ -0.31
HDAC6-227ENST00000485102 SEMA3CQ99985 751 aa13.14□□□□□ -0.31
HDAC6-227ENST00000485102 APOOQ9BUR5 198 aa13.14□□□□□ -0.31
HDAC6-227ENST00000485102 MAGEB5Q9BZ81 275 aa13.14□□□□□ -0.31
HDAC6-227ENST00000485102 LRRN3Q9H3W5 708 aa13.14□□□□□ -0.31
HDAC6-227ENST00000485102 ANO10Q9NW15 660 aa13.14□□□□□ -0.31
HDAC6-227ENST00000485102 GULP1Q9UBP9 304 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms