RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	KLB	Q86Z14	1044 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	UNC5CL	Q8IV45	518 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	DCP1B	Q8IZD4	617 aa	Known RBP	4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	VPS52	Q8N1B4	723 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	GHDC	Q8N2G8	530 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	CPXM2	Q8N436	756 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	CREB3L4	Q8TEY5	395 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	SCFD2	Q8WU76	684 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	NR4A3	Q92570	626 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	USP6NL	Q92738	828 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	ATP2A3	Q93084	1043 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	KAZALD1	Q96I82	304 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	IFT27	Q9BW83	186 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	HDHD5	Q9BXW7	423 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	LIMA1	Q9UHB6	759 aa	Known RBP	4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	CDH22	Q9UJ99	828 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	DTX4	Q9Y2E6	619 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	PSAT1	Q9Y617	370 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	TNRC18	O15417	2968 aa	Predicted RBP	4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	PCNT	O95613	3336 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	CCDC88B	A6NC98	1476 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	CAMSAP2	Q08AD1	1489 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	ERICH3	Q5RHP9	1530 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	NPIPB15	A6NHN6	443 aa	Predicted RBP	4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	POC1B-GALNT4	F8VUJ3	575 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	PLOD3	O60568	738 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	RNF8	O76064	485 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	KAT7	O95251	611 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	PDE8B	O95263	885 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	UROD	P06132	367 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	LCK	P06239	509 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	PEPD	P12955	493 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	ZNF8	P17098	575 aa	Predicted RBP	4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	TACR3	P29371	465 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	AVPR2	P30518	371 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	FMO4	P31512	558 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	PSMB10	P40306	273 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	SHC2	P98077	582 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	EPS8	Q12929	822 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	TDG	Q13569	410 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	ACVR2B	Q13705	512 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	IL13RA2	Q14627	380 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	TWIST1	Q15672	202 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	AP5B1	Q2VPB7	878 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	EDRF1	Q3B7T1	1238 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	DPCR1	Q3MIW9	517 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	LEXM	Q3ZCV2	418 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	TMEM268	Q5VZI3	342 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	CDC73	Q6P1J9	531 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	TMEM81	Q6P7N7	255 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	TMCO3	Q6UWJ1	677 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	NAPRT	Q6XQN6	538 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	KRT74	Q7RTS7	529 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	TADA2B	Q86TJ2	420 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	DNAAF1	Q8NEP3	725 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	PRSS3P2	Q8NHM4	247 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	CELF1	Q92879	486 aa	Known RBP	4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	ARHGEF2	Q92974	986 aa	Known RBP	4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	TEFM	Q96QE5	360 aa	Known RBP	4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	FRG2B	Q96QU4	278 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	NCAPG	Q9BPX3	1015 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	SMARCAD1	Q9H4L7	1026 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	BRF2	Q9HAW0	419 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	SEPT11	Q9NVA2	429 aa	Known RBP	4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	ARL15	Q9NXU5	204 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	BCCIP	Q9P287	314 aa	Known RBP eCLIP	4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	IPO11	Q9UI26	975 aa	Known RBP	4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	SLC8A2	Q9UPR5	921 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	CLDN16	Q9Y5I7	305 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	PASK	Q96RG2	1323 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	KIF14	Q15058	1648 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	ABCA9	Q8IUA7	1624 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	PNPLA6	Q8IY17	1366 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024		A0A0C4DFX4	3053 aa		4.13	□□□□□ -1.75
VPS8-223	ENST00000485024	ABCC1	P33527	1531 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	FAM135A	Q9P2D6	1515 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	ARHGAP10	A1A4S6	786 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	EME2	A4GXA9	379 aa	Predicted RBP	4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	LRRC53	A6NM62	1247 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	EIF3CL	B5ME19	914 aa	Known RBP	4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	KCNJ18	B7U540	433 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	PTGES3L	E9PB15	166 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	BCAT2	O15382	392 aa	Predicted RBP	4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	CEP104	O60308	925 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	STARD3NL	O95772	234 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	SERPINC1	P01008	464 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	FGB	P02675	491 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	RFPL3S	P0C7P2	107 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	POU1F1	P28069	291 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	CHRNA5	P30532	468 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	PPARG	P37231	505 aa	Predicted RBP	4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	POU5F1	Q01860	360 aa	Known RBP	4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	GAB1	Q13480	694 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	PLK5	Q496M5	336 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	C5orf22	Q49AR2	442 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	SH2D4B	Q5SQS7	431 aa		4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms