RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 RARAP10276 462 aa10.14□□□□□ -0.79
CPSF4-213ENST00000484112 SERPINB6P35237 376 aa10.14□□□□□ -0.79
CPSF4-213ENST00000484112 RECQLP46063 649 aaPredicted RBP10.14□□□□□ -0.79
CPSF4-213ENST00000484112 ARF5P84085 180 aa10.14□□□□□ -0.79
CPSF4-213ENST00000484112 RHDQ02161 417 aa10.14□□□□□ -0.79
CPSF4-213ENST00000484112 SERINC3Q13530 473 aa10.14□□□□□ -0.79
CPSF4-213ENST00000484112 DPYSQ14117 519 aa10.14□□□□□ -0.79
CPSF4-213ENST00000484112 LY6DQ14210 128 aa10.14□□□□□ -0.79
CPSF4-213ENST00000484112 RFTN1Q14699 578 aaPredicted RBP10.14□□□□□ -0.79
CPSF4-213ENST00000484112 ZNF542PQ5EBM4 170 aa10.14□□□□□ -0.79
CPSF4-213ENST00000484112 PPP6R3Q5H9R7 873 aaPredicted RBP10.14□□□□□ -0.79
CPSF4-213ENST00000484112 AFMIDQ63HM1 303 aa10.14□□□□□ -0.79
CPSF4-213ENST00000484112 Q6ZVU0 165 aa10.14□□□□□ -0.79
CPSF4-213ENST00000484112 LSMEM2Q8N112 164 aa10.14□□□□□ -0.79
CPSF4-213ENST00000484112 TMIEQ8NEW7 156 aa10.14□□□□□ -0.79
CPSF4-213ENST00000484112 OR7D4Q8NG98 312 aa10.14□□□□□ -0.79
CPSF4-213ENST00000484112 OR4C6Q8NH72 309 aa10.14□□□□□ -0.79
CPSF4-213ENST00000484112 UBE2Q2Q8WVN8 375 aa10.14□□□□□ -0.79
CPSF4-213ENST00000484112 KCNE4Q8WWG9 221 aa10.14□□□□□ -0.79
CPSF4-213ENST00000484112 FAM131CQ96AQ9 280 aa10.14□□□□□ -0.79
CPSF4-213ENST00000484112 KCTD15Q96SI1 283 aaPredicted RBP10.14□□□□□ -0.79
CPSF4-213ENST00000484112 BAG1Q99933 345 aaPredicted RBP10.14□□□□□ -0.79
CPSF4-213ENST00000484112 ZNF670Q9BS34 389 aa10.14□□□□□ -0.79
CPSF4-213ENST00000484112 SPON2Q9BUD6 331 aa10.14□□□□□ -0.79
CPSF4-213ENST00000484112 PACSIN1Q9BY11 444 aa10.14□□□□□ -0.79
CPSF4-213ENST00000484112 LRRC19Q9H756 370 aa10.14□□□□□ -0.79
CPSF4-213ENST00000484112 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.14□□□□□ -0.79
CPSF4-213ENST00000484112 NDFIP2Q9NV92 336 aa10.14□□□□□ -0.79
CPSF4-213ENST00000484112 KLHL11Q9NVR0 708 aa10.14□□□□□ -0.79
CPSF4-213ENST00000484112 WDR70Q9NW82 654 aa10.14□□□□□ -0.79
CPSF4-213ENST00000484112 PCDHA13Q9Y5I0 950 aa10.14□□□□□ -0.79
CPSF4-213ENST00000484112 EPN1Q9Y6I3 576 aaPredicted RBP10.14□□□□□ -0.79
CPSF4-213ENST00000484112 GCN1Q92616 2671 aaKnown RBP10.13□□□□□ -0.79
CPSF4-213ENST00000484112 RASA4BC9J798 803 aa10.13□□□□□ -0.79
CPSF4-213ENST00000484112 KPNA3O00505 521 aaPredicted RBP10.13□□□□□ -0.79
CPSF4-213ENST00000484112 RASA4O43374 803 aa10.13□□□□□ -0.79
CPSF4-213ENST00000484112 SNAP91O60641 907 aa10.13□□□□□ -0.79
CPSF4-213ENST00000484112 PIAS2O75928 621 aa10.13□□□□□ -0.79
CPSF4-213ENST00000484112 PCDH8O95206 1070 aa10.13□□□□□ -0.79
CPSF4-213ENST00000484112 GSRP00390 522 aa10.13□□□□□ -0.79
CPSF4-213ENST00000484112 ALPPL2P10696 532 aa10.13□□□□□ -0.79
CPSF4-213ENST00000484112 CKMT1AP12532 417 aa10.13□□□□□ -0.79
CPSF4-213ENST00000484112 KRT10P13645 584 aa10.13□□□□□ -0.79
CPSF4-213ENST00000484112 ERCC2P18074 760 aa10.13□□□□□ -0.79
CPSF4-213ENST00000484112 IL1R2P27930 398 aa10.13□□□□□ -0.79
CPSF4-213ENST00000484112 AKT2P31751 481 aa10.13□□□□□ -0.79
CPSF4-213ENST00000484112 UCNP55089 124 aa10.13□□□□□ -0.79
CPSF4-213ENST00000484112 CLDN2P57739 230 aa10.13□□□□□ -0.79
CPSF4-213ENST00000484112 SNRPD1P62314 119 aaKnown RBP10.13□□□□□ -0.79
CPSF4-213ENST00000484112 KRT81Q14533 505 aa10.13□□□□□ -0.79
CPSF4-213ENST00000484112 GRM3Q14832 879 aa10.13□□□□□ -0.79
CPSF4-213ENST00000484112 CA9Q16790 459 aa10.13□□□□□ -0.79
CPSF4-213ENST00000484112 CDCP2Q5VXM1 449 aa10.13□□□□□ -0.79
CPSF4-213ENST00000484112 C22orf39Q6P5X5 142 aa10.13□□□□□ -0.79
CPSF4-213ENST00000484112 TMCO3Q6UWJ1 677 aa10.13□□□□□ -0.79
CPSF4-213ENST00000484112 FAM181AQ8N9Y4 354 aa10.13□□□□□ -0.79
CPSF4-213ENST00000484112 OR13H1Q8NG92 308 aa10.13□□□□□ -0.79
CPSF4-213ENST00000484112 OR2A12Q8NGT7 310 aa10.13□□□□□ -0.79
CPSF4-213ENST00000484112 MAPK15Q8TD08 544 aa10.13□□□□□ -0.79
CPSF4-213ENST00000484112 PPP1R16AQ96I34 528 aa10.13□□□□□ -0.79
CPSF4-213ENST00000484112 APOLD1Q96LR9 279 aa10.13□□□□□ -0.79
CPSF4-213ENST00000484112 ZNF599Q96NL3 588 aa10.13□□□□□ -0.79
CPSF4-213ENST00000484112 OSBPL1AQ9BXW6 950 aa10.13□□□□□ -0.79
CPSF4-213ENST00000484112 MAGEB5Q9BZ81 275 aa10.13□□□□□ -0.79
CPSF4-213ENST00000484112 SEMA4CQ9C0C4 833 aa10.13□□□□□ -0.79
CPSF4-213ENST00000484112 NOL6Q9H6R4 1146 aaKnown RBP10.13□□□□□ -0.79
CPSF4-213ENST00000484112 POLR1BQ9H9Y6 1135 aa10.13□□□□□ -0.79
CPSF4-213ENST00000484112 PREBQ9HCU5 417 aa10.13□□□□□ -0.79
CPSF4-213ENST00000484112 DNAJC28Q9NX36 388 aa10.13□□□□□ -0.79
CPSF4-213ENST00000484112 CWC15Q9P013 229 aaKnown RBP10.13□□□□□ -0.79
CPSF4-213ENST00000484112 CPED1A4D0V7 1026 aa10.12□□□□□ -0.79
CPSF4-213ENST00000484112 NEMP2A6NFY4 417 aa10.12□□□□□ -0.79
CPSF4-213ENST00000484112 NEBLO76041 1014 aa10.12□□□□□ -0.79
CPSF4-213ENST00000484112 CD160O95971 181 aa10.12□□□□□ -0.79
CPSF4-213ENST00000484112 MT-CO1P00395 513 aa10.12□□□□□ -0.79
CPSF4-213ENST00000484112 CHRNA3P32297 505 aa10.12□□□□□ -0.79
CPSF4-213ENST00000484112 ACVRL1P37023 503 aa10.12□□□□□ -0.79
CPSF4-213ENST00000484112 SSR1P43307 286 aaKnown RBP10.12□□□□□ -0.79
CPSF4-213ENST00000484112 LSSP48449 732 aa10.12□□□□□ -0.79
CPSF4-213ENST00000484112 DUSP3P51452 185 aaPredicted RBP10.12□□□□□ -0.79
CPSF4-213ENST00000484112 ARSEP51690 589 aa10.12□□□□□ -0.79
CPSF4-213ENST00000484112 TAS2R38P59533 333 aa10.12□□□□□ -0.79
CPSF4-213ENST00000484112 RAD51Q06609 339 aa10.12□□□□□ -0.79
CPSF4-213ENST00000484112 SMTNL2Q2TAL5 461 aa10.12□□□□□ -0.79
CPSF4-213ENST00000484112 CARD16Q5EG05 197 aa10.12□□□□□ -0.79
CPSF4-213ENST00000484112 C3orf38Q5JPI3 329 aa10.12□□□□□ -0.79
CPSF4-213ENST00000484112 PIP5KL1Q5T9C9 394 aa10.12□□□□□ -0.79
CPSF4-213ENST00000484112 FOXR1Q6PIV2 292 aa10.12□□□□□ -0.79
CPSF4-213ENST00000484112 ZSCAN30Q86W11 494 aa10.12□□□□□ -0.79
CPSF4-213ENST00000484112 HORMAD1Q86X24 394 aa10.12□□□□□ -0.79
CPSF4-213ENST00000484112 RHOT1Q8IXI2 618 aa10.12□□□□□ -0.79
CPSF4-213ENST00000484112 TMEM145Q8NBT3 493 aa10.12□□□□□ -0.79
CPSF4-213ENST00000484112 CCDC112Q8NEF3 446 aa10.12□□□□□ -0.79
CPSF4-213ENST00000484112 IFI44Q8TCB0 444 aa10.12□□□□□ -0.79
CPSF4-213ENST00000484112 HCAR2Q8TDS4 363 aa10.12□□□□□ -0.79
CPSF4-213ENST00000484112 HSPH1Q92598 858 aa10.12□□□□□ -0.79
CPSF4-213ENST00000484112 HIC2Q96JB3 615 aa10.12□□□□□ -0.79
CPSF4-213ENST00000484112 BTBD6Q96KE9 485 aa10.12□□□□□ -0.79
CPSF4-213ENST00000484112 CSPG4P5Q96PW8 444 aa10.12□□□□□ -0.79
CPSF4-213ENST00000484112 KLC2Q9H0B6 622 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms