RNA–Protein interactions for RNA: ENST00000483708.1

COMMD2-205, Transcript of COMM domain containing 2, humanhuman

TSL 3

Gene COMMD2, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-205ENST00000483708 ASB12Q8WXK4 309 aa12.68□□□□□ -0.38
COMMD2-205ENST00000483708 BMFQ96LC9 184 aa12.68□□□□□ -0.38
COMMD2-205ENST00000483708 RNF157Q96PX1 679 aa12.68□□□□□ -0.38
COMMD2-205ENST00000483708 WRAP53Q9BUR4 548 aaKnown RBP12.68□□□□□ -0.38
COMMD2-205ENST00000483708 NOD2Q9HC29 1040 aa12.68□□□□□ -0.38
COMMD2-205ENST00000483708 PCDH12Q9NPG4 1184 aa12.68□□□□□ -0.38
COMMD2-205ENST00000483708 SCUBE2Q9NQ36 999 aa12.68□□□□□ -0.38
COMMD2-205ENST00000483708 DDX56Q9NY93 547 aaKnown RBP12.68□□□□□ -0.38
COMMD2-205ENST00000483708 PCOLCE2Q9UKZ9 415 aa12.68□□□□□ -0.38
COMMD2-205ENST00000483708 TFR2Q9UP52 801 aa12.68□□□□□ -0.38
COMMD2-205ENST00000483708 ALG6Q9Y672 507 aa12.68□□□□□ -0.38
COMMD2-205ENST00000483708 NUMA1Q14980 2115 aa12.68□□□□□ -0.38
COMMD2-205ENST00000483708 TSPAN11A1L157 253 aa12.67□□□□□ -0.38
COMMD2-205ENST00000483708 POM121BA6NF01 834 aa12.67□□□□□ -0.38
COMMD2-205ENST00000483708 A6NNZ2 444 aa12.67□□□□□ -0.38
COMMD2-205ENST00000483708 RIOK3O14730 519 aaKnown RBP12.67□□□□□ -0.38
COMMD2-205ENST00000483708 MATN3O15232 486 aa12.67□□□□□ -0.38
COMMD2-205ENST00000483708 RAD51BO15315 384 aa12.67□□□□□ -0.38
COMMD2-205ENST00000483708 YKT6O15498 198 aa12.67□□□□□ -0.38
COMMD2-205ENST00000483708 CBFA2T3O75081 653 aa12.67□□□□□ -0.38
COMMD2-205ENST00000483708 TM7SF2O76062 418 aa12.67□□□□□ -0.38
COMMD2-205ENST00000483708 MAP3K6O95382 1288 aa12.67□□□□□ -0.38
COMMD2-205ENST00000483708 CCNCP24863 283 aa12.67□□□□□ -0.38
COMMD2-205ENST00000483708 HADHBP55084 474 aaKnown RBP12.67□□□□□ -0.38
COMMD2-205ENST00000483708 MAXP61244 160 aa12.67□□□□□ -0.38
COMMD2-205ENST00000483708 GBE1Q04446 702 aa12.67□□□□□ -0.38
COMMD2-205ENST00000483708 ITKQ08881 620 aa12.67□□□□□ -0.38
COMMD2-205ENST00000483708 BNIP3Q12983 259 aa12.67□□□□□ -0.38
COMMD2-205ENST00000483708 SHBQ15464 509 aa12.67□□□□□ -0.38
COMMD2-205ENST00000483708 INAVAQ3KP66 663 aa12.67□□□□□ -0.38
COMMD2-205ENST00000483708 TIGD7Q6NT04 549 aaPredicted RBP12.67□□□□□ -0.38
COMMD2-205ENST00000483708 GCNT7Q6ZNI0 430 aa12.67□□□□□ -0.38
COMMD2-205ENST00000483708 PTAR1Q7Z6K3 402 aaPredicted RBP12.67□□□□□ -0.38
COMMD2-205ENST00000483708 ZSWIM9Q86XI8 627 aa12.67□□□□□ -0.38
COMMD2-205ENST00000483708 GATAD2AQ86YP4 633 aa12.67□□□□□ -0.38
COMMD2-205ENST00000483708 DCP2Q8IU60 420 aaKnown RBP12.67□□□□□ -0.38
COMMD2-205ENST00000483708 TEX26Q8N6G2 289 aa12.67□□□□□ -0.38
COMMD2-205ENST00000483708 SPC24Q8NBT2 197 aa12.67□□□□□ -0.38
COMMD2-205ENST00000483708 CCNYQ8ND76 341 aa12.67□□□□□ -0.38
COMMD2-205ENST00000483708 OR13H1Q8NG92 308 aa12.67□□□□□ -0.38
COMMD2-205ENST00000483708 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.67□□□□□ -0.38
COMMD2-205ENST00000483708 SAP25Q8TEE9 199 aa12.67□□□□□ -0.38
COMMD2-205ENST00000483708 RNF25Q96BH1 459 aaPredicted RBP12.67□□□□□ -0.38
COMMD2-205ENST00000483708 NSMCE3Q96MG7 304 aa12.67□□□□□ -0.38
COMMD2-205ENST00000483708 NUDCD1Q96RS6 583 aa12.67□□□□□ -0.38
COMMD2-205ENST00000483708 CDC6Q99741 560 aa12.67□□□□□ -0.38
COMMD2-205ENST00000483708 MGME1Q9BQP7 344 aa12.67□□□□□ -0.38
COMMD2-205ENST00000483708 NT5MQ9NPB1 228 aa12.67□□□□□ -0.38
COMMD2-205ENST00000483708 BTBD3Q9Y2F9 522 aa12.67□□□□□ -0.38
COMMD2-205ENST00000483708 PCDHGC4Q9Y5F7 938 aa12.67□□□□□ -0.38
COMMD2-205ENST00000483708 NUP205Q92621 2012 aa12.67□□□□□ -0.38
COMMD2-205ENST00000483708 A0A0A6YYK5 440 aaPredicted RBP12.66□□□□□ -0.38
COMMD2-205ENST00000483708 C3orf70A6NLC5 250 aaPredicted RBP12.66□□□□□ -0.38
COMMD2-205ENST00000483708 ZNF487B1APH4 448 aa12.66□□□□□ -0.38
COMMD2-205ENST00000483708 TRAFD1O14545 582 aaPredicted RBP12.66□□□□□ -0.38
COMMD2-205ENST00000483708 NEBLO76041 1014 aa12.66□□□□□ -0.38
COMMD2-205ENST00000483708 KRT1P04264 644 aa12.66□□□□□ -0.38
COMMD2-205ENST00000483708 PRKCGP05129 697 aa12.66□□□□□ -0.38
COMMD2-205ENST00000483708 ZFXP17010 805 aaPredicted RBP12.66□□□□□ -0.38
COMMD2-205ENST00000483708 CR2P20023 1033 aa12.66□□□□□ -0.38
COMMD2-205ENST00000483708 FECHP22830 423 aa12.66□□□□□ -0.38
COMMD2-205ENST00000483708 PMLP29590 882 aa12.66□□□□□ -0.38
COMMD2-205ENST00000483708 CDC25BP30305 580 aa12.66□□□□□ -0.38
COMMD2-205ENST00000483708 RABIFP47224 123 aa12.66□□□□□ -0.38
COMMD2-205ENST00000483708 LIG3P49916 1009 aa12.66□□□□□ -0.38
COMMD2-205ENST00000483708 NAP1L1P55209 391 aaKnown RBP12.66□□□□□ -0.38
COMMD2-205ENST00000483708 SEMG2Q02383 582 aa12.66□□□□□ -0.38
COMMD2-205ENST00000483708 SLC10A2Q12908 348 aaPredicted RBP12.66□□□□□ -0.38
COMMD2-205ENST00000483708 FOXC1Q12948 553 aa12.66□□□□□ -0.38
COMMD2-205ENST00000483708 VSIG1Q86XK7 387 aa12.66□□□□□ -0.38
COMMD2-205ENST00000483708 RFX6Q8HWS3 928 aa12.66□□□□□ -0.38
COMMD2-205ENST00000483708 DENND6BQ8NEG7 585 aa12.66□□□□□ -0.38
COMMD2-205ENST00000483708 PDCD6IPQ8WUM4 868 aaKnown RBP12.66□□□□□ -0.38
COMMD2-205ENST00000483708 LRRN4Q8WUT4 740 aa12.66□□□□□ -0.38
COMMD2-205ENST00000483708 CENPTQ96BT3 561 aa12.66□□□□□ -0.38
COMMD2-205ENST00000483708 ECHDC3Q96DC8 303 aa12.66□□□□□ -0.38
COMMD2-205ENST00000483708 ZNF830Q96NB3 372 aaPredicted RBP12.66□□□□□ -0.38
COMMD2-205ENST00000483708 TSGA13Q96PP4 275 aa12.66□□□□□ -0.38
COMMD2-205ENST00000483708 KLF6Q99612 283 aaPredicted RBP12.66□□□□□ -0.38
COMMD2-205ENST00000483708 BAG1Q99933 345 aaPredicted RBP12.66□□□□□ -0.38
COMMD2-205ENST00000483708 C1QTNF7Q9BXJ2 289 aa12.66□□□□□ -0.38
COMMD2-205ENST00000483708 RBM22Q9NW64 420 aaKnown RBP eCLIP12.66□□□□□ -0.38
COMMD2-205ENST00000483708 DTLQ9NZJ0 730 aa12.66□□□□□ -0.38
COMMD2-205ENST00000483708 IMPACTQ9P2X3 320 aa12.66□□□□□ -0.38
COMMD2-205ENST00000483708 ATP8A1Q9Y2Q0 1164 aa12.66□□□□□ -0.38
COMMD2-205ENST00000483708 HEY1Q9Y5J3 304 aa12.66□□□□□ -0.38
COMMD2-205ENST00000483708 TNRC6BQ9UPQ9 1833 aaKnown RBP12.66□□□□□ -0.38
COMMD2-205ENST00000483708 DOCK4Q8N1I0 1966 aa12.65□□□□□ -0.38
COMMD2-205ENST00000483708 PCDH15Q96QU1 1955 aa12.65□□□□□ -0.38
COMMD2-205ENST00000483708 A0A1W2PQ67 120 aa12.65□□□□□ -0.38
COMMD2-205ENST00000483708 RCCD1A6NED2 376 aa12.65□□□□□ -0.38
COMMD2-205ENST00000483708 APOL1O14791 398 aa12.65□□□□□ -0.38
COMMD2-205ENST00000483708 LZTS3O60299 673 aaPredicted RBP12.65□□□□□ -0.38
COMMD2-205ENST00000483708 CCNB1P14635 433 aa12.65□□□□□ -0.38
COMMD2-205ENST00000483708 CES1P23141 567 aa12.65□□□□□ -0.38
COMMD2-205ENST00000483708 EPHA8P29322 1005 aaPredicted RBP12.65□□□□□ -0.38
COMMD2-205ENST00000483708 RALGPS1Q5JS13 557 aa12.65□□□□□ -0.38
COMMD2-205ENST00000483708 SLC9A4Q6AI14 798 aa12.65□□□□□ -0.38
COMMD2-205ENST00000483708 MFSD7Q6UXD7 560 aa12.65□□□□□ -0.38
COMMD2-205ENST00000483708 RAD9BQ6WBX8 426 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms