RNA–Protein interactions for RNA: ENST00000483684.1

COMMD3-213, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 722 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-213ENST00000483684 OCIAD1Q9NX40 245 aa4.3□□□□□ -1.72
COMMD3-213ENST00000483684 AGO1Q9UL18 857 aaKnown RBP4.3□□□□□ -1.72
COMMD3-213ENST00000483684 DGKBQ9Y6T7 804 aa4.3□□□□□ -1.72
COMMD3-213ENST00000483684 A0A1B0GVM2 712 aa4.29□□□□□ -1.72
COMMD3-213ENST00000483684 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.29□□□□□ -1.72
COMMD3-213ENST00000483684 ARHGAP10A1A4S6 786 aa4.29□□□□□ -1.72
COMMD3-213ENST00000483684 DYTNA2CJ06 578 aa4.29□□□□□ -1.72
COMMD3-213ENST00000483684 PABPN1LA6NDY0 278 aaKnown RBP4.29□□□□□ -1.72
COMMD3-213ENST00000483684 CBY3A6NI87 242 aa4.29□□□□□ -1.72
COMMD3-213ENST00000483684 EBAG9O00559 213 aa4.29□□□□□ -1.72
COMMD3-213ENST00000483684 TIMM23O14925 209 aa4.29□□□□□ -1.72
COMMD3-213ENST00000483684 ATP2C2O75185 946 aa4.29□□□□□ -1.72
COMMD3-213ENST00000483684 SERPINI2O75830 405 aa4.29□□□□□ -1.72
COMMD3-213ENST00000483684 TFPIP10646 304 aa4.29□□□□□ -1.72
COMMD3-213ENST00000483684 MYF6P23409 242 aa4.29□□□□□ -1.72
COMMD3-213ENST00000483684 CXCR3P49682 368 aa4.29□□□□□ -1.72
COMMD3-213ENST00000483684 BLKP51451 505 aa4.29□□□□□ -1.72
COMMD3-213ENST00000483684 BNC1Q01954 994 aa4.29□□□□□ -1.72
COMMD3-213ENST00000483684 CHRNDQ07001 517 aa4.29□□□□□ -1.72
COMMD3-213ENST00000483684 TDGQ13569 410 aa4.29□□□□□ -1.72
COMMD3-213ENST00000483684 ZRSR1Q15695 479 aaKnown RBP4.29□□□□□ -1.72
COMMD3-213ENST00000483684 TAF12Q16514 161 aa4.29□□□□□ -1.72
COMMD3-213ENST00000483684 TYW3Q6IPR3 259 aaKnown RBP4.29□□□□□ -1.72
COMMD3-213ENST00000483684 CES5AQ6NT32 575 aa4.29□□□□□ -1.72
COMMD3-213ENST00000483684 CREB3L2Q70SY1 520 aa4.29□□□□□ -1.72
COMMD3-213ENST00000483684 LRRTM4Q86VH4 590 aa4.29□□□□□ -1.72
COMMD3-213ENST00000483684 RUFY2Q8WXA3 655 aa4.29□□□□□ -1.72
COMMD3-213ENST00000483684 ELP4Q96EB1 424 aa4.29□□□□□ -1.72
COMMD3-213ENST00000483684 INPP4AQ96PE3 977 aaPredicted RBP4.29□□□□□ -1.72
COMMD3-213ENST00000483684 ANKRD10Q9NXR5 420 aa4.29□□□□□ -1.72
COMMD3-213ENST00000483684 HSF4Q9ULV5 492 aa4.29□□□□□ -1.72
COMMD3-213ENST00000483684 PCDHGB5Q9Y5G0 923 aa4.29□□□□□ -1.72
COMMD3-213ENST00000483684 KIF26BQ2KJY2 2108 aa4.28□□□□□ -1.72
COMMD3-213ENST00000483684 IGLV5-52A0A0A0MRZ9 124 aa4.28□□□□□ -1.72
COMMD3-213ENST00000483684 LOC102724159A0A0B4J2E5 919 aa4.28□□□□□ -1.72
COMMD3-213ENST00000483684 TYW5A2RUC4 315 aaKnown RBP4.28□□□□□ -1.72
COMMD3-213ENST00000483684 J3KR12 359 aa4.28□□□□□ -1.72
COMMD3-213ENST00000483684 HSD3B1P14060 373 aa4.28□□□□□ -1.72
COMMD3-213ENST00000483684 RYKP34925 604 aa4.28□□□□□ -1.72
COMMD3-213ENST00000483684 RPL3P39023 403 aaKnown RBP4.28□□□□□ -1.72
COMMD3-213ENST00000483684 ST3GAL1Q11201 340 aa4.28□□□□□ -1.72
COMMD3-213ENST00000483684 RUNX2Q13950 521 aa4.28□□□□□ -1.72
COMMD3-213ENST00000483684 DHX8Q14562 1220 aaKnown RBP4.28□□□□□ -1.72
COMMD3-213ENST00000483684 PWP2Q15269 919 aaKnown RBP4.28□□□□□ -1.72
COMMD3-213ENST00000483684 SF3B4Q15427 424 aaKnown RBP eCLIP4.28□□□□□ -1.72
COMMD3-213ENST00000483684 DCAF6Q58WW2 860 aa4.28□□□□□ -1.72
COMMD3-213ENST00000483684 ZNF667Q5HYK9 610 aa4.28□□□□□ -1.72
COMMD3-213ENST00000483684 RETSATQ6NUM9 610 aa4.28□□□□□ -1.72
COMMD3-213ENST00000483684 TAF15Q92804 592 aaKnown RBP eCLIP4.28□□□□□ -1.72
COMMD3-213ENST00000483684 WBP2Q969T9 261 aa4.28□□□□□ -1.72
COMMD3-213ENST00000483684 FIZ1Q96SL8 496 aa4.28□□□□□ -1.72
COMMD3-213ENST00000483684 TTYH1Q9H313 450 aaPredicted RBP4.28□□□□□ -1.72
COMMD3-213ENST00000483684 PEMTQ9UBM1 199 aa4.28□□□□□ -1.72
COMMD3-213ENST00000483684 NDRG3Q9UGV2 375 aa4.28□□□□□ -1.72
COMMD3-213ENST00000483684 SLC45A1Q9Y2W3 748 aa4.28□□□□□ -1.72
COMMD3-213ENST00000483684 WDR81Q562E7 1941 aa4.28□□□□□ -1.72
COMMD3-213ENST00000483684 RGS11O94810 467 aa4.27□□□□□ -1.73
COMMD3-213ENST00000483684 SP1P08047 785 aa4.27□□□□□ -1.73
COMMD3-213ENST00000483684 ZNF8P17098 575 aaPredicted RBP4.27□□□□□ -1.73
COMMD3-213ENST00000483684 SRD5A1P18405 259 aa4.27□□□□□ -1.73
COMMD3-213ENST00000483684 CNTFP26441 200 aa4.27□□□□□ -1.73
COMMD3-213ENST00000483684 PGM1P36871 562 aa4.27□□□□□ -1.73
COMMD3-213ENST00000483684 YWHAZP63104 245 aaKnown RBP4.27□□□□□ -1.73
COMMD3-213ENST00000483684 GRSF1Q12849 480 aaKnown RBP eCLIP4.27□□□□□ -1.73
COMMD3-213ENST00000483684 NFIL3Q16649 462 aa4.27□□□□□ -1.73
COMMD3-213ENST00000483684 MEX3BQ6ZN04 569 aaKnown RBP4.27□□□□□ -1.73
COMMD3-213ENST00000483684 FAM160B2Q86V87 743 aa4.27□□□□□ -1.73
COMMD3-213ENST00000483684 SFTPA2Q8IWL1 248 aa4.27□□□□□ -1.73
COMMD3-213ENST00000483684 CCDC105Q8IYK2 499 aa4.27□□□□□ -1.73
COMMD3-213ENST00000483684 PLD5Q8N7P1 536 aa4.27□□□□□ -1.73
COMMD3-213ENST00000483684 ARRDC2Q8TBH0 407 aa4.27□□□□□ -1.73
COMMD3-213ENST00000483684 TRIB2Q92519 343 aa4.27□□□□□ -1.73
COMMD3-213ENST00000483684 RTP4Q96DX8 246 aa4.27□□□□□ -1.73
COMMD3-213ENST00000483684 UBXN10Q96LJ8 280 aa4.27□□□□□ -1.73
COMMD3-213ENST00000483684 CYSLTR2Q9NS75 346 aa4.27□□□□□ -1.73
COMMD3-213ENST00000483684 SNTG1Q9NSN8 517 aa4.27□□□□□ -1.73
COMMD3-213ENST00000483684 TMEM160Q9NX00 188 aa4.27□□□□□ -1.73
COMMD3-213ENST00000483684 IL1RAPL1Q9NZN1 696 aa4.27□□□□□ -1.73
COMMD3-213ENST00000483684 OR6C3Q9NZP0 311 aa4.27□□□□□ -1.73
COMMD3-213ENST00000483684 LUZP4Q9P127 313 aa4.27□□□□□ -1.73
COMMD3-213ENST00000483684 HSPB2A8KAH6 182 aa4.26□□□□□ -1.73
COMMD3-213ENST00000483684 KLRF2D3W0D1 207 aa4.26□□□□□ -1.73
COMMD3-213ENST00000483684 VNN2O95498 520 aa4.26□□□□□ -1.73
COMMD3-213ENST00000483684 CH25HO95992 272 aa4.26□□□□□ -1.73
COMMD3-213ENST00000483684 IGLV2-11P01706 119 aa4.26□□□□□ -1.73
COMMD3-213ENST00000483684 SLC2A4P14672 509 aa4.26□□□□□ -1.73
COMMD3-213ENST00000483684 PTPN2P17706 415 aa4.26□□□□□ -1.73
COMMD3-213ENST00000483684 EDN2P20800 178 aa4.26□□□□□ -1.73
COMMD3-213ENST00000483684 GPD2P43304 727 aa4.26□□□□□ -1.73
COMMD3-213ENST00000483684 CCT5P48643 541 aa4.26□□□□□ -1.73
COMMD3-213ENST00000483684 HDAC4P56524 1084 aa4.26□□□□□ -1.73
COMMD3-213ENST00000483684 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.26□□□□□ -1.73
COMMD3-213ENST00000483684 ILF3Q12906 894 aaKnown RBP eCLIP4.26□□□□□ -1.73
COMMD3-213ENST00000483684 BIRC3Q13489 604 aa4.26□□□□□ -1.73
COMMD3-213ENST00000483684 RBM39Q14498 530 aaKnown RBP4.26□□□□□ -1.73
COMMD3-213ENST00000483684 HSPB2Q16082 182 aa4.26□□□□□ -1.73
COMMD3-213ENST00000483684 ESCO2Q56NI9 601 aa4.26□□□□□ -1.73
COMMD3-213ENST00000483684 EFHC1Q5JVL4 640 aa4.26□□□□□ -1.73
COMMD3-213ENST00000483684 SLC22A25Q6T423 547 aa4.26□□□□□ -1.73
COMMD3-213ENST00000483684 CYP26C1Q6V0L0 522 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms