RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 HNRNPLP14866 589 aaKnown RBP eCLIP11.9□□□□□ -0.5
VTI1A-205ENST00000483122 CAP2P40123 477 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 NR4A2P43354 598 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 RGS7P49802 495 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 AP3M2P53677 418 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 CLCQ05315 142 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 SQLEQ14534 574 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 GRM3Q14832 879 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 MAPRE1Q15691 268 aaKnown RBP11.9□□□□□ -0.5
VTI1A-205ENST00000483122 TSTD2Q5T7W7 516 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 CLIP4Q8N3C7 705 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 SPATA6LQ8N4H0 392 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 MFSD3Q96ES6 412 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 CENPNQ96H22 339 aaPredicted RBP11.9□□□□□ -0.5
VTI1A-205ENST00000483122 CPB2Q96IY4 423 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 RPL10LQ96L21 214 aaKnown RBP11.9□□□□□ -0.5
VTI1A-205ENST00000483122 PDCD2LQ9BRP1 358 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 SEPT10Q9P0V9 454 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 SYNPO2Q9UMS6 1093 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 SIP14410 1827 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 TRIP11Q15643 1979 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 UBDO15205 165 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 DDHD2O94830 711 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 KRT19P08727 400 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 IL10P22301 178 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 AXLP30530 894 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 SHMT2P34897 504 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 YBX1P67809 324 aaKnown RBP11.89□□□□□ -0.51
VTI1A-205ENST00000483122 ADARB1P78563 741 aaKnown RBP11.89□□□□□ -0.51
VTI1A-205ENST00000483122 MAPRE2Q15555 327 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 Q3C1V9 767 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 HSDL1Q3SXM5 330 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 FAM45BPQ6NSW5 357 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 MMAAQ8IVH4 418 aaKnown RBP11.89□□□□□ -0.51
VTI1A-205ENST00000483122 ADGRG5Q8IZF4 528 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 FSTL5Q8N475 847 aaPredicted RBP11.89□□□□□ -0.51
VTI1A-205ENST00000483122 MINDY2Q8NBR6 621 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.89□□□□□ -0.51
VTI1A-205ENST00000483122 FAM45AQ8TCE6 357 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 ZUFSPQ96AP4 578 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 FKBP10Q96AY3 582 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 VPS39Q96JC1 886 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 RMDN3Q96TC7 470 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 NAT9Q9BTE0 207 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 DNAI2Q9GZS0 605 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 RAVER2Q9HCJ3 691 aaKnown RBP11.89□□□□□ -0.51
VTI1A-205ENST00000483122 TNFRSF12AQ9NP84 129 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 TBC1D13Q9NVG8 400 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 GGA3Q9NZ52 723 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 MTRRQ9UBK8 725 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 FEM1BQ9UK73 627 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 TLL2Q9Y6L7 1015 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 ZCWPW2A0A1B0GU75 182 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 TRPC5OSA6NMA1 111 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 AURKAO14965 403 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 XYLBO75191 536 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 MT-CO1P00395 513 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 UGT2B4P06133 528 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 APOA4P06727 396 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 MZF1P28698 734 aaPredicted RBP11.89□□□□□ -0.51
VTI1A-205ENST00000483122 BMPR1AP36894 532 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 NAMPTP43490 491 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 RPS9P46781 194 aaKnown RBP11.89□□□□□ -0.51
VTI1A-205ENST00000483122 LEPRP48357 1165 aaKnown RBP11.89□□□□□ -0.51
VTI1A-205ENST00000483122 ARCN1P48444 511 aaKnown RBP11.89□□□□□ -0.51
VTI1A-205ENST00000483122 C1QTNF8P60827 252 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 PRPSAP1Q14558 356 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 MAPK11Q15759 364 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 ZIK1Q3SY52 487 aaPredicted RBP11.89□□□□□ -0.51
VTI1A-205ENST00000483122 FAM209AQ5JX71 171 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 DACT2Q5SW24 774 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 TMTC4Q5T4D3 741 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 ATAD3BQ5T9A4 648 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 BROXQ5VW32 411 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 NCBP2-AS2Q69YL0 99 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 TBPL2Q6SJ96 375 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 CRTC3Q6UUV7 619 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 SLC16A12Q6ZSM3 486 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 C14orf80Q86SX3 495 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 FAM35AQ86V20 835 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 RETREG3Q86VR2 466 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 SLC22A16Q86VW1 577 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 SPNS2Q8IVW8 549 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 RDM1Q8NG50 284 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 RDH11Q8TC12 318 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 PNPT1Q8TCS8 783 aaKnown RBP11.89□□□□□ -0.51
VTI1A-205ENST00000483122 STYXQ8WUJ0 223 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 MUS81Q96NY9 551 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 FUNDC2Q9BWH2 189 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 YTHDF1Q9BYJ9 559 aaKnown RBP11.89□□□□□ -0.51
VTI1A-205ENST00000483122 WDR12Q9GZL7 423 aaKnown RBP11.89□□□□□ -0.51
VTI1A-205ENST00000483122 HOXD1Q9GZZ0 328 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 OSBPL2Q9H1P3 480 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 PARVBQ9HBI1 364 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 IARS2Q9NSE4 1012 aaKnown RBP11.89□□□□□ -0.51
VTI1A-205ENST00000483122 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.89□□□□□ -0.51
VTI1A-205ENST00000483122 XPR1Q9UBH6 696 aa11.89□□□□□ -0.51
VTI1A-205ENST00000483122 WARS2Q9UGM6 360 aaKnown RBP11.89□□□□□ -0.51
VTI1A-205ENST00000483122 MGAMO43451 1857 aa11.88□□□□□ -0.51
VTI1A-205ENST00000483122 CCDC78A2IDD5 438 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms