RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 TERTO14746 1132 aaKnown RBP7.47□□□□□ -1.21
CSDE1-206ENST00000483030 NVLO15381 856 aaKnown RBP7.47□□□□□ -1.21
CSDE1-206ENST00000483030 SUV39H1O43463 412 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 GSRP00390 522 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 ITGB2P05107 769 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 ALPIP09923 528 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 TIMP2P16035 220 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 ITIH1P19827 911 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 FECHP22830 423 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 CCKBRP32239 447 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 SCNN1AP37088 669 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 ETFBP38117 255 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 GABRB2P47870 512 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 BLKP51451 505 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 GEMIN4P57678 1058 aaKnown RBP7.47□□□□□ -1.21
CSDE1-206ENST00000483030 BPIFB4P59827 614 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 CYP4F2P78329 520 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 ATP11AP98196 1134 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 SRSF1Q07955 248 aaKnown RBP eCLIP7.47□□□□□ -1.21
CSDE1-206ENST00000483030 LRRC14Q15048 493 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 TBR1Q16650 682 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 ALG11Q2TAA5 492 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 RAB6CQ53S08 254 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 COLEC12Q5KU26 742 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 MANEAQ5SRI9 462 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 TAF3Q5VWG9 929 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 ENPP7Q6UWV6 458 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 NYAP1Q6ZVC0 841 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 BNIPLQ7Z465 357 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 VASH2Q86V25 355 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 ZFAND4Q86XD8 727 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 FAM71AQ8IYT1 594 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 TP53I13Q8NBR0 393 aaPredicted RBP7.47□□□□□ -1.21
CSDE1-206ENST00000483030 ARHGEF2Q92974 986 aaKnown RBP7.47□□□□□ -1.21
CSDE1-206ENST00000483030 MARVELD3Q96A59 401 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 POM121Q96HA1 1249 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 TMEM74Q96NL1 305 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 OSBPL1AQ9BXW6 950 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 MAGEB5Q9BZ81 275 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 EDEM3Q9BZQ6 932 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 RAB6CQ9H0N0 254 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 SIX2Q9NPC8 291 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 SEPT10Q9P0V9 454 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 OR12D3Q9UGF7 316 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 TMEM59LQ9UK28 342 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 ACSL6Q9UKU0 697 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 COQ6Q9Y2Z9 468 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 LOXL2Q9Y4K0 774 aa7.47□□□□□ -1.21
CSDE1-206ENST00000483030 PRAMEF33A0A0G2JMD5 474 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 CXorf51AA0A1B0GTR3 108 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 GTPBP10A4D1E9 387 aaKnown RBP7.46□□□□□ -1.22
CSDE1-206ENST00000483030 TMEM110-MUSTN1A8MSY1 372 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 FAM72CH0Y354 149 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 TOR1BO14657 336 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 BUB1O43683 1085 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 KDELR3O43731 214 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 PRAMEF10O60809 474 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 RAMP2O60895 175 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 RASGRP1O95267 797 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 LIPCP11150 499 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 SFTPCP11686 197 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 CYP11B1P15538 503 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 RHOQP17081 205 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 WT1P19544 449 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-206ENST00000483030 XPAP23025 273 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-206ENST00000483030 HTR1BP28222 390 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 CDH5P33151 784 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-206ENST00000483030 ADRA1BP35368 520 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 DEKP35659 375 aaKnown RBP7.46□□□□□ -1.22
CSDE1-206ENST00000483030 MAPKAPK2P49137 400 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 PEX5P50542 639 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 SRP54P61011 504 aaKnown RBP7.46□□□□□ -1.22
CSDE1-206ENST00000483030 RAD51Q06609 339 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 ZFP36L1Q07352 338 aaKnown RBP7.46□□□□□ -1.22
CSDE1-206ENST00000483030 INPP5AQ14642 412 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 IRF4Q15306 451 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 WSCD2Q2TBF2 565 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 TMEM52BQ4KMG9 183 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 FAM72AQ5TYM5 149 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 FAM72DQ6L9T8 149 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 NLRP14Q86W24 1093 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 FAM72BQ86X60 149 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 GKN2Q86XP6 184 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 ZNF354CQ86Y25 554 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 IRF2BP1Q8IU81 584 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 CCNJLQ8IV13 435 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 EMC1Q8N766 993 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 ZSCAN1Q8NBB4 408 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 FAM46DQ8NEK8 389 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 OR6C4Q8NGE1 309 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 CPA5Q8WXQ8 436 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 USP7Q93009 1102 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 SEMA3CQ99985 751 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 APOOQ9BUR5 198 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 TTYH3Q9C0H2 523 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 MAGEH1Q9H213 219 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 OR1A2Q9Y585 309 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 PCDHB11Q9Y5F2 797 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 PCDHGA4Q9Y5G9 962 aa7.46□□□□□ -1.22
CSDE1-206ENST00000483030 RNF215Q9Y6U7 377 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms