RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 CDK4P11802 303 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 PABPC1P11940 636 aaKnown RBP6.68□□□□□ -1.34
LRCH3-216ENST00000481048 CD19P15391 556 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 PRKCHP24723 683 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 CD27P26842 260 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 ACADSBP45954 432 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 FMO5P49326 533 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 DAOAP59103 153 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 ST8SIA6P61647 398 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 FAM193AP78312 1265 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 ADIGQ0VDE8 80 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 MTA1Q13330 715 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 MEA1Q16626 185 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 GOLGA7BQ2TAP0 167 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 HLA-BQ31612 363 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 TTC31Q49AM3 519 aaPredicted RBP6.68□□□□□ -1.34
LRCH3-216ENST00000481048 FNDC3BQ53EP0 1204 aaKnown RBP6.68□□□□□ -1.34
LRCH3-216ENST00000481048 DCAF17Q5H9S7 520 aaPredicted RBP6.68□□□□□ -1.34
LRCH3-216ENST00000481048 MBLAC2Q68D91 279 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 LRSAM1Q6UWE0 723 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 CHST9Q7L1S5 443 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 ADIPOR2Q86V24 386 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 PROSER1Q86XN7 944 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 CCDC117Q8IWD4 279 aaPredicted RBP6.68□□□□□ -1.34
LRCH3-216ENST00000481048 GALNT15Q8N3T1 639 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 ZCCHC9Q8N567 271 aaKnown RBP6.68□□□□□ -1.34
LRCH3-216ENST00000481048 UBR7Q8N806 425 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 ADCY4Q8NFM4 1077 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 SETD7Q8WTS6 366 aaKnown RBP6.68□□□□□ -1.34
LRCH3-216ENST00000481048 RNF34Q969K3 372 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 IGSF8Q969P0 613 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 SLC35C1Q96A29 364 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 TTC17Q96AE7 1141 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 SKA1Q96BD8 255 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 EEF2KMTQ96G04 330 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 NT5C1BQ96P26 610 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 NOX5Q96PH1 765 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 PPP1R9BQ96SB3 815 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 TRIM62Q9BVG3 475 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 LHX5Q9H2C1 402 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 GOLPH3LQ9H4A5 285 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 PRSS16Q9NQE7 514 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 FSCN3Q9NQT6 498 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 ABCB8Q9NUT2 735 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 DKK4Q9UBT3 224 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 FBLN5Q9UBX5 448 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 SFMBT1Q9UHJ3 866 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 GGA2Q9UJY4 613 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 PPT2Q9UMR5 302 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 NCKAP1Q9Y2A7 1128 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.68□□□□□ -1.34
LRCH3-216ENST00000481048 COL5A1P20908 1838 aaPredicted RBP6.68□□□□□ -1.34
LRCH3-216ENST00000481048 PLXNA2O75051 1894 aa6.68□□□□□ -1.34
LRCH3-216ENST00000481048 NYNRINQ9P2P1 1898 aaKnown RBP6.68□□□□□ -1.34
LRCH3-216ENST00000481048 PTPRQQ9UMZ3 2332 aa6.67□□□□□ -1.34
LRCH3-216ENST00000481048 MUC22E2RYF6 1773 aaPredicted RBP6.67□□□□□ -1.34
LRCH3-216ENST00000481048 AKAP13Q12802 2813 aa6.67□□□□□ -1.34
LRCH3-216ENST00000481048 TARSL2A2RTX5 802 aaKnown RBP6.67□□□□□ -1.34
LRCH3-216ENST00000481048 E9PAM4 449 aa6.67□□□□□ -1.34
LRCH3-216ENST00000481048 TULP2O00295 520 aa6.67□□□□□ -1.34
LRCH3-216ENST00000481048 CBFA2T2O43439 604 aa6.67□□□□□ -1.34
LRCH3-216ENST00000481048 ACSL4O60488 711 aa6.67□□□□□ -1.34
LRCH3-216ENST00000481048 TSPAN3O60637 253 aa6.67□□□□□ -1.34
LRCH3-216ENST00000481048 MOCS3O95396 460 aa6.67□□□□□ -1.34
LRCH3-216ENST00000481048 SEMA4FO95754 770 aa6.67□□□□□ -1.34
LRCH3-216ENST00000481048 GNA14O95837 355 aa6.67□□□□□ -1.34
LRCH3-216ENST00000481048 ACSL1P33121 698 aa6.67□□□□□ -1.34
LRCH3-216ENST00000481048 RPL34P49207 117 aaKnown RBP6.67□□□□□ -1.34
LRCH3-216ENST00000481048 TBX4P57082 545 aa6.67□□□□□ -1.34
LRCH3-216ENST00000481048 RPS14P62263 151 aaKnown RBP6.67□□□□□ -1.34
LRCH3-216ENST00000481048 RACK1P63244 317 aaKnown RBP6.67□□□□□ -1.34
LRCH3-216ENST00000481048 GCNT1Q02742 428 aa6.67□□□□□ -1.34
LRCH3-216ENST00000481048 PNOCQ13519 176 aa6.67□□□□□ -1.34
LRCH3-216ENST00000481048 SLC12A1Q13621 1099 aa6.67□□□□□ -1.34
LRCH3-216ENST00000481048 FAM133BQ5BKY9 247 aaKnown RBP6.67□□□□□ -1.34
LRCH3-216ENST00000481048 ZNF776Q68DI1 518 aaPredicted RBP6.67□□□□□ -1.34
LRCH3-216ENST00000481048 PMF1Q6P1K2 205 aa6.67□□□□□ -1.34
LRCH3-216ENST00000481048 TMEM270Q6UE05 265 aa6.67□□□□□ -1.34
LRCH3-216ENST00000481048 OR2I1PQ8NGU4 316 aa6.67□□□□□ -1.34
LRCH3-216ENST00000481048 UBA3Q8TBC4 463 aa6.67□□□□□ -1.34
LRCH3-216ENST00000481048 SORCS1Q8WY21 1168 aa6.67□□□□□ -1.34
LRCH3-216ENST00000481048 NDRG1Q92597 394 aaKnown RBP6.67□□□□□ -1.34
LRCH3-216ENST00000481048 SMARCE1Q969G3 411 aa6.67□□□□□ -1.34
LRCH3-216ENST00000481048 PEX11GQ96HA9 241 aa6.67□□□□□ -1.34
LRCH3-216ENST00000481048 FAM81BQ96LP2 452 aa6.67□□□□□ -1.34
LRCH3-216ENST00000481048 CAMK1GQ96NX5 476 aa6.67□□□□□ -1.34
LRCH3-216ENST00000481048 SERPINB11Q96P15 392 aa6.67□□□□□ -1.34
LRCH3-216ENST00000481048 MCMBPQ9BTE3 642 aa6.67□□□□□ -1.34
LRCH3-216ENST00000481048 RSPH9Q9H1X1 276 aaPredicted RBP6.67□□□□□ -1.34
LRCH3-216ENST00000481048 C6orf106Q9H6K1 298 aaPredicted RBP6.67□□□□□ -1.34
LRCH3-216ENST00000481048 TMEM51Q9NW97 253 aa6.67□□□□□ -1.34
LRCH3-216ENST00000481048 NTMQ9P121 344 aa6.67□□□□□ -1.34
LRCH3-216ENST00000481048 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.67□□□□□ -1.34
LRCH3-216ENST00000481048 ANKRD6Q9Y2G4 727 aa6.67□□□□□ -1.34
LRCH3-216ENST00000481048 PCDHB4Q9Y5E5 795 aa6.67□□□□□ -1.34
LRCH3-216ENST00000481048 SPEGQ15772 3267 aa6.67□□□□□ -1.34
LRCH3-216ENST00000481048 ZFHX4Q86UP3 3567 aa6.67□□□□□ -1.34
LRCH3-216ENST00000481048 A0A1B0GVT2 93 aa6.66□□□□□ -1.34
LRCH3-216ENST00000481048 A0A1W2PPC4 97 aa6.66□□□□□ -1.34
LRCH3-216ENST00000481048 BICDL2A1A5D9 508 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms