RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 BNIP3Q12983 259 aa11.56□□□□□ -0.56
CCM2-213ENST00000480658 DPYSQ14117 519 aa11.56□□□□□ -0.56
CCM2-213ENST00000480658 LRRC14Q15048 493 aa11.56□□□□□ -0.56
CCM2-213ENST00000480658 ELOCQ15369 112 aa11.56□□□□□ -0.56
CCM2-213ENST00000480658 CCDC157Q569K6 752 aa11.56□□□□□ -0.56
CCM2-213ENST00000480658 ATXN7L2Q5T6C5 722 aaPredicted RBP11.56□□□□□ -0.56
CCM2-213ENST00000480658 HES3Q5TGS1 186 aa11.56□□□□□ -0.56
CCM2-213ENST00000480658 AFMIDQ63HM1 303 aa11.56□□□□□ -0.56
CCM2-213ENST00000480658 TIGD7Q6NT04 549 aaPredicted RBP11.56□□□□□ -0.56
CCM2-213ENST00000480658 LUZP1Q86V48 1076 aa11.56□□□□□ -0.56
CCM2-213ENST00000480658 LSMEM2Q8N112 164 aa11.56□□□□□ -0.56
CCM2-213ENST00000480658 ATPAF2Q8N5M1 289 aa11.56□□□□□ -0.56
CCM2-213ENST00000480658 ZNF548Q8NEK5 533 aaPredicted RBP11.56□□□□□ -0.56
CCM2-213ENST00000480658 OR6C4Q8NGE1 309 aa11.56□□□□□ -0.56
CCM2-213ENST00000480658 CTNNBL1Q8WYA6 563 aaPredicted RBP11.56□□□□□ -0.56
CCM2-213ENST00000480658 NAT6Q93015 286 aa11.56□□□□□ -0.56
CCM2-213ENST00000480658 CENPTQ96BT3 561 aa11.56□□□□□ -0.56
CCM2-213ENST00000480658 BMFQ96LC9 184 aa11.56□□□□□ -0.56
CCM2-213ENST00000480658 DEPDC7Q96QD5 511 aa11.56□□□□□ -0.56
CCM2-213ENST00000480658 KLF6Q99612 283 aaPredicted RBP11.56□□□□□ -0.56
CCM2-213ENST00000480658 ABCG4Q9H172 646 aa11.56□□□□□ -0.56
CCM2-213ENST00000480658 DEF6Q9H4E7 631 aa11.56□□□□□ -0.56
CCM2-213ENST00000480658 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.56□□□□□ -0.56
CCM2-213ENST00000480658 LHX3Q9UBR4 397 aa11.56□□□□□ -0.56
CCM2-213ENST00000480658 APOBEC3BQ9UH17 382 aaKnown RBP11.56□□□□□ -0.56
CCM2-213ENST00000480658 AMACRQ9UHK6 382 aa11.56□□□□□ -0.56
CCM2-213ENST00000480658 ANAPC7Q9UJX3 599 aa11.56□□□□□ -0.56
CCM2-213ENST00000480658 DNPEPQ9ULA0 475 aa11.56□□□□□ -0.56
CCM2-213ENST00000480658 ATP8A1Q9Y2Q0 1164 aa11.56□□□□□ -0.56
CCM2-213ENST00000480658 POM121BA6NF01 834 aa11.55□□□□□ -0.56
CCM2-213ENST00000480658 SDC3O75056 442 aa11.55□□□□□ -0.56
CCM2-213ENST00000480658 TCEA3O75764 348 aa11.55□□□□□ -0.56
CCM2-213ENST00000480658 KRT7P08729 469 aa11.55□□□□□ -0.56
CCM2-213ENST00000480658 ELFN1P0C7U0 828 aa11.55□□□□□ -0.56
CCM2-213ENST00000480658 JUNDP17535 347 aa11.55□□□□□ -0.56
CCM2-213ENST00000480658 CES1P23141 567 aa11.55□□□□□ -0.56
CCM2-213ENST00000480658 MMP12P39900 470 aa11.55□□□□□ -0.56
CCM2-213ENST00000480658 PBX1P40424 430 aa11.55□□□□□ -0.56
CCM2-213ENST00000480658 CLDN2P57739 230 aa11.55□□□□□ -0.56
CCM2-213ENST00000480658 DNAJC3Q13217 504 aa11.55□□□□□ -0.56
CCM2-213ENST00000480658 MTM1Q13496 603 aa11.55□□□□□ -0.56
CCM2-213ENST00000480658 FZD2Q14332 565 aa11.55□□□□□ -0.56
CCM2-213ENST00000480658 KRT81Q14533 505 aa11.55□□□□□ -0.56
CCM2-213ENST00000480658 LBRQ14739 615 aaKnown RBP11.55□□□□□ -0.56
CCM2-213ENST00000480658 NFKBIBQ15653 356 aa11.55□□□□□ -0.56
CCM2-213ENST00000480658 PRAMEF14Q5SWL7 426 aa11.55□□□□□ -0.56
CCM2-213ENST00000480658 HGSNATQ68CP4 663 aa11.55□□□□□ -0.56
CCM2-213ENST00000480658 SPECC1LQ69YQ0 1117 aa11.55□□□□□ -0.56
CCM2-213ENST00000480658 ESRP1Q6NXG1 681 aaKnown RBP11.55□□□□□ -0.56
CCM2-213ENST00000480658 ALKBH5Q6P6C2 394 aaKnown RBP11.55□□□□□ -0.56
CCM2-213ENST00000480658 LVRNQ6Q4G3 990 aa11.55□□□□□ -0.56
CCM2-213ENST00000480658 SRLQ86TD4 932 aa11.55□□□□□ -0.56
CCM2-213ENST00000480658 SLC25A45Q8N413 288 aa11.55□□□□□ -0.56
CCM2-213ENST00000480658 KLK6Q92876 244 aa11.55□□□□□ -0.56
CCM2-213ENST00000480658 KCTD15Q96SI1 283 aaPredicted RBP11.55□□□□□ -0.56
CCM2-213ENST00000480658 SLC39A8Q9C0K1 460 aa11.55□□□□□ -0.56
CCM2-213ENST00000480658 MAP1BP46821 2468 aaKnown RBP11.55□□□□□ -0.56
CCM2-213ENST00000480658 LMO7DNF2Z398 122 aa11.54□□□□□ -0.56
CCM2-213ENST00000480658 PSMD11O00231 422 aa11.54□□□□□ -0.56
CCM2-213ENST00000480658 CACNB4O00305 520 aaPredicted RBP11.54□□□□□ -0.56
CCM2-213ENST00000480658 FFAR2O15552 330 aa11.54□□□□□ -0.56
CCM2-213ENST00000480658 RRP8O43159 456 aaKnown RBP11.54□□□□□ -0.56
CCM2-213ENST00000480658 ZW10O43264 779 aa11.54□□□□□ -0.56
CCM2-213ENST00000480658 LZTS3O60299 673 aaPredicted RBP11.54□□□□□ -0.56
CCM2-213ENST00000480658 KRT37O76014 449 aa11.54□□□□□ -0.56
CCM2-213ENST00000480658 CYP1A2P05177 515 aa11.54□□□□□ -0.56
CCM2-213ENST00000480658 PYGLP06737 847 aa11.54□□□□□ -0.56
CCM2-213ENST00000480658 ANXA6P08133 673 aa11.54□□□□□ -0.56
CCM2-213ENST00000480658 H2AFZP0C0S5 128 aa11.54□□□□□ -0.56
CCM2-213ENST00000480658 C6P13671 934 aa11.54□□□□□ -0.56
CCM2-213ENST00000480658 HNRNPH3P31942 346 aaKnown RBP11.54□□□□□ -0.56
CCM2-213ENST00000480658 PPARDQ03181 441 aa11.54□□□□□ -0.56
CCM2-213ENST00000480658 RTP5Q14D33 572 aa11.54□□□□□ -0.56
CCM2-213ENST00000480658 PDK2Q15119 407 aa11.54□□□□□ -0.56
CCM2-213ENST00000480658 CYTH1Q15438 398 aa11.54□□□□□ -0.56
CCM2-213ENST00000480658 ZSCAN23Q3MJ62 389 aa11.54□□□□□ -0.56
CCM2-213ENST00000480658 LEKR1Q6ZMV7 388 aa11.54□□□□□ -0.56
CCM2-213ENST00000480658 H2AFVQ71UI9 128 aa11.54□□□□□ -0.56
CCM2-213ENST00000480658 POLNQ7Z5Q5 900 aa11.54□□□□□ -0.56
CCM2-213ENST00000480658 GKN2Q86XP6 184 aa11.54□□□□□ -0.56
CCM2-213ENST00000480658 RAVER1Q8IY67 606 aaKnown RBP11.54□□□□□ -0.56
CCM2-213ENST00000480658 DCBLD1Q8N8Z6 715 aa11.54□□□□□ -0.56
CCM2-213ENST00000480658 HSPH1Q92598 858 aa11.54□□□□□ -0.56
CCM2-213ENST00000480658 ECHDC3Q96DC8 303 aa11.54□□□□□ -0.56
CCM2-213ENST00000480658 CELF6Q96J87 481 aaKnown RBP11.54□□□□□ -0.56
CCM2-213ENST00000480658 EXOC2Q96KP1 924 aa11.54□□□□□ -0.56
CCM2-213ENST00000480658 ZNF830Q96NB3 372 aaPredicted RBP11.54□□□□□ -0.56
CCM2-213ENST00000480658 PEBP4Q96S96 227 aa11.54□□□□□ -0.56
CCM2-213ENST00000480658 ZNF670Q9BS34 389 aa11.54□□□□□ -0.56
CCM2-213ENST00000480658 NUP85Q9BW27 656 aa11.54□□□□□ -0.56
CCM2-213ENST00000480658 THAP2Q9H0W7 228 aa11.54□□□□□ -0.56
CCM2-213ENST00000480658 PCDH12Q9NPG4 1184 aa11.54□□□□□ -0.56
CCM2-213ENST00000480658 CWC15Q9P013 229 aaKnown RBP11.54□□□□□ -0.56
CCM2-213ENST00000480658 DOLKQ9UPQ8 538 aa11.54□□□□□ -0.56
CCM2-213ENST00000480658 CA5BQ9Y2D0 317 aa11.54□□□□□ -0.56
CCM2-213ENST00000480658 ACTL7AQ9Y615 435 aa11.54□□□□□ -0.56
CCM2-213ENST00000480658 ZFHX4Q86UP3 3567 aa11.54□□□□□ -0.56
CCM2-213ENST00000480658 CACNA1BQ00975 2339 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 WDFY3Q8IZQ1 3526 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 SSU72P8A0A1W2PR75 194 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms