RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 ANO4Q32M45 955 aa10.73□□□□□ -0.69
SIK3-210ENST00000480468 RAB6CQ53S08 254 aa10.73□□□□□ -0.69
SIK3-210ENST00000480468 TMEM135Q86UB9 458 aa10.73□□□□□ -0.69
SIK3-210ENST00000480468 TBC1D21Q8IYX1 336 aa10.73□□□□□ -0.69
SIK3-210ENST00000480468 SPARTQ8N0X7 666 aa10.73□□□□□ -0.69
SIK3-210ENST00000480468 SCML4Q8N228 414 aa10.73□□□□□ -0.69
SIK3-210ENST00000480468 AFAP1L2Q8N4X5 818 aa10.73□□□□□ -0.69
SIK3-210ENST00000480468 OR6Q1Q8NGQ2 317 aa10.73□□□□□ -0.69
SIK3-210ENST00000480468 ZFP90Q8TF47 636 aa10.73□□□□□ -0.69
SIK3-210ENST00000480468 PHF10Q8WUB8 498 aaKnown RBP10.73□□□□□ -0.69
SIK3-210ENST00000480468 HDAC2Q92769 488 aaKnown RBP10.73□□□□□ -0.69
SIK3-210ENST00000480468 MUL1Q969V5 352 aa10.73□□□□□ -0.69
SIK3-210ENST00000480468 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.73□□□□□ -0.69
SIK3-210ENST00000480468 HDAC11Q96DB2 347 aa10.73□□□□□ -0.69
SIK3-210ENST00000480468 FCRL3Q96P31 734 aaPredicted RBP10.73□□□□□ -0.69
SIK3-210ENST00000480468 MTMR12Q9C0I1 747 aa10.73□□□□□ -0.69
SIK3-210ENST00000480468 RAB6CQ9H0N0 254 aa10.73□□□□□ -0.69
SIK3-210ENST00000480468 XYLT2Q9H1B5 865 aa10.73□□□□□ -0.69
SIK3-210ENST00000480468 RAVER2Q9HCJ3 691 aaKnown RBP10.73□□□□□ -0.69
SIK3-210ENST00000480468 GPATCH2LQ9NWQ4 482 aa10.73□□□□□ -0.69
SIK3-210ENST00000480468 KLQ9UEF7 1012 aa10.73□□□□□ -0.69
SIK3-210ENST00000480468 TLK1Q9UKI8 766 aa10.73□□□□□ -0.69
SIK3-210ENST00000480468 HES2Q9Y543 173 aa10.73□□□□□ -0.69
SIK3-210ENST00000480468 COL2A1P02458 1487 aaPredicted RBP10.72□□□□□ -0.69
SIK3-210ENST00000480468 AHDC1Q5TGY3 1603 aaPredicted RBP10.72□□□□□ -0.69
SIK3-210ENST00000480468 K7ERI5 159 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 VWA5AO00534 786 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 DLX3O60479 287 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 MICAL2O94851 1124 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 SNAP29O95721 258 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 ALBP02768 609 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 UMPSP11172 480 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 GFAPP14136 432 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 ITIH1P19827 911 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 NR4A1P22736 598 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 DNAJB13P59910 316 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 PHC1P78364 1004 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 CHRNEQ04844 493 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 BST2Q10589 180 aaKnown RBP10.72□□□□□ -0.69
SIK3-210ENST00000480468 DPYSL2Q16555 572 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 CA9Q16790 459 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 BTBD8Q5XKL5 378 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 SCARA5Q6ZMJ2 495 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 PRR23CQ6ZRP0 262 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 PIWIL3Q7Z3Z3 882 aaKnown RBP10.72□□□□□ -0.69
SIK3-210ENST00000480468 SLCO6A1Q86UG4 719 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 C11orf74Q86VG3 221 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 SLC22A16Q86VW1 577 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 COLGALT1Q8NBJ5 622 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 CLEC4DQ8WXI8 215 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 MASTLQ96GX5 879 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 MED30Q96HR3 178 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 GPR22Q99680 433 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 CLSTN3Q9BQT9 956 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 TARS2Q9BW92 718 aaKnown RBP10.72□□□□□ -0.69
SIK3-210ENST00000480468 BCO2Q9BYV7 579 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 OR2B2Q9GZK3 357 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 CAB39LQ9H9S4 337 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 ANKHQ9HCJ1 492 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 HPS4Q9NQG7 708 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 GABBR1Q9UBS5 961 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 FBXO40Q9UH90 709 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 FEM1BQ9UK73 627 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 TBKBP1A7MCY6 615 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 NME4O00746 187 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 GABARAPO95166 117 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 BMP4P12644 408 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 GRK3P35626 688 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 CACNB3P54284 484 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 GJA9P57773 515 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 PTPN11Q06124 597 aaPredicted RBP10.72□□□□□ -0.69
SIK3-210ENST00000480468 SELPLGQ14242 412 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 PLCL1Q15111 1095 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 DGUOKQ16854 277 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 SPPL2CQ8IUH8 684 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 MINDY1Q8N5J2 469 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 ANKK1Q8NFD2 765 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 BEST2Q8NFU1 509 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 LRRN4Q8WUT4 740 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 OSCP1Q8WVF1 389 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 TP53INP1Q96A56 240 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 CLIP3Q96DZ5 547 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 MOCOSQ96EN8 888 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 MFSD3Q96ES6 412 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 VPS39Q96JC1 886 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 SH3GL1Q99961 368 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 TMEM134Q9H6X4 195 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 NECTIN3Q9NQS3 549 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 NSMCE4AQ9NXX6 385 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 CCDC167Q9P0B6 97 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 CRNNQ9UBG3 495 aaPredicted RBP10.72□□□□□ -0.69
SIK3-210ENST00000480468 DGKBQ9Y6T7 804 aa10.72□□□□□ -0.69
SIK3-210ENST00000480468 ZCWPW2A0A1B0GU75 182 aa10.71□□□□□ -0.69
SIK3-210ENST00000480468 A8MU76 341 aa10.71□□□□□ -0.69
SIK3-210ENST00000480468 TCP10L2B9ZVM9 353 aa10.71□□□□□ -0.69
SIK3-210ENST00000480468 H0Y858 1186 aa10.71□□□□□ -0.69
SIK3-210ENST00000480468 AURKAO14965 403 aa10.71□□□□□ -0.69
SIK3-210ENST00000480468 KCNQ2O43526 872 aa10.71□□□□□ -0.69
SIK3-210ENST00000480468 RFPL2O75678 378 aa10.71□□□□□ -0.69
SIK3-210ENST00000480468 LDLRP01130 860 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms