RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 IL37Q9NZH6 218 aa21.4■■□□□ 1.02
SDF4-206ENST00000478938 SARDHQ9UL12 918 aa21.4■■□□□ 1.02
SDF4-206ENST00000478938 DAB1O75553 588 aa21.39■■□□□ 1.01
SDF4-206ENST00000478938 UPK1BO75841 260 aa21.39■■□□□ 1.01
SDF4-206ENST00000478938 SRP72O76094 671 aaKnown RBP21.39■■□□□ 1.01
SDF4-206ENST00000478938 GH2P01242 217 aa21.39■■□□□ 1.01
SDF4-206ENST00000478938 MT-ND1P03886 318 aa21.39■■□□□ 1.01
SDF4-206ENST00000478938 HOXD10P28358 340 aa21.39■■□□□ 1.01
SDF4-206ENST00000478938 SHMT1P34896 483 aa21.39■■□□□ 1.01
SDF4-206ENST00000478938 IMPG1Q17R60 797 aa21.39■■□□□ 1.01
SDF4-206ENST00000478938 ZACNQ401N2 412 aa21.39■■□□□ 1.01
SDF4-206ENST00000478938 STEAP3Q658P3 488 aa21.39■■□□□ 1.01
SDF4-206ENST00000478938 MAP4K3Q8IVH8 894 aa21.39■■□□□ 1.01
SDF4-206ENST00000478938 LSMEM2Q8N112 164 aa21.39■■□□□ 1.01
SDF4-206ENST00000478938 GPD1LQ8N335 351 aa21.39■■□□□ 1.01
SDF4-206ENST00000478938 PGLYRP2Q96PD5 576 aa21.39■■□□□ 1.01
SDF4-206ENST00000478938 MRASO14807 208 aa21.39■■□□□ 1.01
SDF4-206ENST00000478938 IL10P22301 178 aa21.39■■□□□ 1.01
SDF4-206ENST00000478938 POLD2P49005 469 aa21.39■■□□□ 1.01
SDF4-206ENST00000478938 STX5Q13190 355 aa21.39■■□□□ 1.01
SDF4-206ENST00000478938 IRAK1BP1Q5VVH5 260 aa21.39■■□□□ 1.01
SDF4-206ENST00000478938 CES3Q6UWW8 571 aa21.39■■□□□ 1.01
SDF4-206ENST00000478938 CELF2-AS1Q8N7Q2 184 aa21.39■■□□□ 1.01
SDF4-206ENST00000478938 GLMNQ92990 594 aa21.39■■□□□ 1.01
SDF4-206ENST00000478938 ZFYVE19Q96K21 471 aa21.39■■□□□ 1.01
SDF4-206ENST00000478938 PEBP4Q96S96 227 aa21.39■■□□□ 1.01
SDF4-206ENST00000478938 ST6GALNAC4Q9H4F1 302 aa21.39■■□□□ 1.01
SDF4-206ENST00000478938 OXSMQ9NWU1 459 aa21.39■■□□□ 1.01
SDF4-206ENST00000478938 ARHGAP28Q9P2N2 729 aa21.39■■□□□ 1.01
SDF4-206ENST00000478938 CAB39Q9Y376 341 aaPredicted RBP21.39■■□□□ 1.01
SDF4-206ENST00000478938 TK2O00142 265 aa21.38■■□□□ 1.01
SDF4-206ENST00000478938 CRHBPP24387 322 aa21.38■■□□□ 1.01
SDF4-206ENST00000478938 LRPAP1P30533 357 aa21.38■■□□□ 1.01
SDF4-206ENST00000478938 NAGLUP54802 743 aa21.38■■□□□ 1.01
SDF4-206ENST00000478938 SELPLGQ14242 412 aa21.38■■□□□ 1.01
SDF4-206ENST00000478938 RAB6CQ53S08 254 aa21.38■■□□□ 1.01
SDF4-206ENST00000478938 TBPL2Q6SJ96 375 aa21.38■■□□□ 1.01
SDF4-206ENST00000478938 NEK10Q6ZWH5 1172 aa21.38■■□□□ 1.01
SDF4-206ENST00000478938 CCDC28AQ8IWP9 274 aa21.38■■□□□ 1.01
SDF4-206ENST00000478938 LSM14AQ8ND56 463 aaKnown RBP21.38■■□□□ 1.01
SDF4-206ENST00000478938 SLC10A4Q96EP9 437 aa21.38■■□□□ 1.01
SDF4-206ENST00000478938 SNX18Q96RF0 628 aa21.38■■□□□ 1.01
SDF4-206ENST00000478938 TEKT3Q9BXF9 490 aa21.38■■□□□ 1.01
SDF4-206ENST00000478938 WDR11Q9BZH6 1224 aa21.38■■□□□ 1.01
SDF4-206ENST00000478938 RAB6CQ9H0N0 254 aa21.38■■□□□ 1.01
SDF4-206ENST00000478938 TLR9Q9NR96 1032 aa21.38■■□□□ 1.01
SDF4-206ENST00000478938 KCNN3Q9UGI6 736 aa21.38■■□□□ 1.01
SDF4-206ENST00000478938 A8MV72 311 aaPredicted RBP21.38■■□□□ 1.01
SDF4-206ENST00000478938 USP12O75317 370 aa21.38■■□□□ 1.01
SDF4-206ENST00000478938 SEC24AO95486 1093 aa21.38■■□□□ 1.01
SDF4-206ENST00000478938 CFBP00751 764 aa21.38■■□□□ 1.01
SDF4-206ENST00000478938 C7P10643 843 aa21.38■■□□□ 1.01
SDF4-206ENST00000478938 PSMA4P25789 261 aaKnown RBP21.38■■□□□ 1.01
SDF4-206ENST00000478938 PPP5CP53041 499 aa21.38■■□□□ 1.01
SDF4-206ENST00000478938 GP2P55259 537 aaKnown RBP21.38■■□□□ 1.01
SDF4-206ENST00000478938 VBP1P61758 197 aa21.38■■□□□ 1.01
SDF4-206ENST00000478938 TNFAIP2Q03169 654 aa21.38■■□□□ 1.01
SDF4-206ENST00000478938 C19orf57Q0VDD7 668 aa21.38■■□□□ 1.01
SDF4-206ENST00000478938 C15orf59Q2T9L4 293 aaPredicted RBP21.38■■□□□ 1.01
SDF4-206ENST00000478938 SLC22A15Q8IZD6 547 aa21.38■■□□□ 1.01
SDF4-206ENST00000478938 SLC22A17Q8WUG5 538 aa21.38■■□□□ 1.01
SDF4-206ENST00000478938 DMRTB1Q96MA1 342 aa21.38■■□□□ 1.01
SDF4-206ENST00000478938 BTBD2Q9BX70 525 aa21.38■■□□□ 1.01
SDF4-206ENST00000478938 ZNF717Q9BY31 904 aaPredicted RBP21.38■■□□□ 1.01
SDF4-206ENST00000478938 C12orf4Q9NQ89 552 aa21.38■■□□□ 1.01
SDF4-206ENST00000478938 FIS1Q9Y3D6 152 aa21.38■■□□□ 1.01
SDF4-206ENST00000478938 AREL1O15033 823 aa21.37■■□□□ 1.01
SDF4-206ENST00000478938 CD68P34810 354 aaPredicted RBP21.37■■□□□ 1.01
SDF4-206ENST00000478938 GPD2P43304 727 aa21.37■■□□□ 1.01
SDF4-206ENST00000478938 ACOT2P49753 483 aa21.37■■□□□ 1.01
SDF4-206ENST00000478938 SESN2P58004 480 aaPredicted RBP21.37■■□□□ 1.01
SDF4-206ENST00000478938 GPLD1P80108 840 aa21.37■■□□□ 1.01
SDF4-206ENST00000478938 PRKAA1Q13131 559 aa21.37■■□□□ 1.01
SDF4-206ENST00000478938 FASTKQ14296 549 aaKnown RBP21.37■■□□□ 1.01
SDF4-206ENST00000478938 PPP1R3AQ16821 1122 aa21.37■■□□□ 1.01
SDF4-206ENST00000478938 DGUOKQ16854 277 aa21.37■■□□□ 1.01
SDF4-206ENST00000478938 BSPRYQ5W0U4 402 aa21.37■■□□□ 1.01
SDF4-206ENST00000478938 STEAP4Q687X5 459 aa21.37■■□□□ 1.01
SDF4-206ENST00000478938 LACC1Q8IV20 430 aa21.37■■□□□ 1.01
SDF4-206ENST00000478938 GALNT12Q8IXK2 581 aa21.37■■□□□ 1.01
SDF4-206ENST00000478938 DTX3Q8N9I9 347 aa21.37■■□□□ 1.01
SDF4-206ENST00000478938 OR6F1Q8NGZ6 308 aa21.37■■□□□ 1.01
SDF4-206ENST00000478938 MUL1Q969V5 352 aa21.37■■□□□ 1.01
SDF4-206ENST00000478938 IL1RL2Q9HB29 575 aa21.37■■□□□ 1.01
SDF4-206ENST00000478938 NMRAL1Q9HBL8 299 aa21.37■■□□□ 1.01
SDF4-206ENST00000478938 COL16A1Q07092 1604 aaPredicted RBP21.37■■□□□ 1.01
SDF4-206ENST00000478938 CCDC78A2IDD5 438 aa21.37■■□□□ 1.01
SDF4-206ENST00000478938 C4BPAP04003 597 aaKnown RBP21.37■■□□□ 1.01
SDF4-206ENST00000478938 ATP2B4P23634 1241 aa21.37■■□□□ 1.01
SDF4-206ENST00000478938 INPP5AQ14642 412 aa21.37■■□□□ 1.01
SDF4-206ENST00000478938 PAGE2Q7Z2X7 111 aa21.37■■□□□ 1.01
SDF4-206ENST00000478938 PIK3C3Q8NEB9 887 aa21.37■■□□□ 1.01
SDF4-206ENST00000478938 FAM83FQ8NEG4 500 aaPredicted RBP21.37■■□□□ 1.01
SDF4-206ENST00000478938 RTP4Q96DX8 246 aa21.37■■□□□ 1.01
SDF4-206ENST00000478938 LRCH3Q96II8 777 aa21.37■■□□□ 1.01
SDF4-206ENST00000478938 SLC45A3Q96JT2 553 aa21.37■■□□□ 1.01
SDF4-206ENST00000478938 SLC38A10Q9HBR0 1119 aa21.37■■□□□ 1.01
SDF4-206ENST00000478938 A0A096LPK6 155 aa21.36■■□□□ 1.01
SDF4-206ENST00000478938 MEN1O00255 615 aa21.36■■□□□ 1.01
SDF4-206ENST00000478938 SDHDO14521 159 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms