RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 OR4D9Q8NGE8 314 aa12.36□□□□□ -0.43
HDAC8-217ENST00000478743 TFAP2BQ92481 460 aa12.36□□□□□ -0.43
HDAC8-217ENST00000478743 SNRNP40Q96DI7 357 aaKnown RBP12.36□□□□□ -0.43
HDAC8-217ENST00000478743 RPRD1AQ96P16 312 aaPredicted RBP12.36□□□□□ -0.43
HDAC8-217ENST00000478743 RUFY1Q96T51 708 aa12.36□□□□□ -0.43
HDAC8-217ENST00000478743 WRAP53Q9BUR4 548 aaKnown RBP12.36□□□□□ -0.43
HDAC8-217ENST00000478743 IMPG2Q9BZV3 1241 aa12.36□□□□□ -0.43
HDAC8-217ENST00000478743 MUC3BQ9H195 1237 aa12.36□□□□□ -0.43
HDAC8-217ENST00000478743 DPEP2Q9H4A9 486 aa12.36□□□□□ -0.43
HDAC8-217ENST00000478743 MLXIPLQ9NP71 852 aa12.36□□□□□ -0.43
HDAC8-217ENST00000478743 SPATS2LQ9NUQ6 558 aaKnown RBP12.36□□□□□ -0.43
HDAC8-217ENST00000478743 VANGL2Q9ULK5 521 aa12.36□□□□□ -0.43
HDAC8-217ENST00000478743 FCF1Q9Y324 198 aaKnown RBP12.36□□□□□ -0.43
HDAC8-217ENST00000478743 TMEM202A6NGA9 273 aa12.35□□□□□ -0.43
HDAC8-217ENST00000478743 KCNU1A8MYU2 1149 aa12.35□□□□□ -0.43
HDAC8-217ENST00000478743 AREL1O15033 823 aa12.35□□□□□ -0.43
HDAC8-217ENST00000478743 ZG16O60844 167 aa12.35□□□□□ -0.43
HDAC8-217ENST00000478743 PPP6R2O75170 966 aa12.35□□□□□ -0.43
HDAC8-217ENST00000478743 MAP3K6O95382 1288 aa12.35□□□□□ -0.43
HDAC8-217ENST00000478743 BMP15O95972 392 aa12.35□□□□□ -0.43
HDAC8-217ENST00000478743 SNRPB2P08579 225 aaKnown RBP12.35□□□□□ -0.43
HDAC8-217ENST00000478743 SETSIPP0DME0 302 aa12.35□□□□□ -0.43
HDAC8-217ENST00000478743 CD19P15391 556 aa12.35□□□□□ -0.43
HDAC8-217ENST00000478743 HNRNPH3P31942 346 aaKnown RBP12.35□□□□□ -0.43
HDAC8-217ENST00000478743 RAB15P59190 212 aa12.35□□□□□ -0.43
HDAC8-217ENST00000478743 EIF4EBP2Q13542 120 aaPredicted RBP12.35□□□□□ -0.43
HDAC8-217ENST00000478743 TRA2AQ13595 282 aaKnown RBP eCLIP12.35□□□□□ -0.43
HDAC8-217ENST00000478743 E2F4Q16254 413 aa12.35□□□□□ -0.43
HDAC8-217ENST00000478743 RABGAP1LQ5R372 815 aa12.35□□□□□ -0.43
HDAC8-217ENST00000478743 ANKRD40Q6AI12 368 aa12.35□□□□□ -0.43
HDAC8-217ENST00000478743 ZNF517Q6ZMY9 492 aaPredicted RBP12.35□□□□□ -0.43
HDAC8-217ENST00000478743 APLFQ8IW19 511 aaPredicted RBP12.35□□□□□ -0.43
HDAC8-217ENST00000478743 RBMXL3Q8N7X1 1067 aaKnown RBP12.35□□□□□ -0.43
HDAC8-217ENST00000478743 SLC35F5Q8WV83 523 aa12.35□□□□□ -0.43
HDAC8-217ENST00000478743 HEPHQ9BQS7 1158 aa12.35□□□□□ -0.43
HDAC8-217ENST00000478743 APOOQ9BUR5 198 aa12.35□□□□□ -0.43
HDAC8-217ENST00000478743 SLC25A23Q9BV35 468 aa12.35□□□□□ -0.43
HDAC8-217ENST00000478743 TM6SF2Q9BZW4 377 aa12.35□□□□□ -0.43
HDAC8-217ENST00000478743 TNMDQ9H2S6 317 aa12.35□□□□□ -0.43
HDAC8-217ENST00000478743 KBTBD4Q9NVX7 518 aa12.35□□□□□ -0.43
HDAC8-217ENST00000478743 HESX1Q9UBX0 185 aa12.35□□□□□ -0.43
HDAC8-217ENST00000478743 SRPRBQ9Y5M8 271 aaKnown RBP12.35□□□□□ -0.43
HDAC8-217ENST00000478743 SNX10Q9Y5X0 201 aa12.35□□□□□ -0.43
HDAC8-217ENST00000478743 IGHV1OR21-1A0A087WYE8 117 aa12.34□□□□□ -0.43
HDAC8-217ENST00000478743 A6NCN8 305 aa12.34□□□□□ -0.43
HDAC8-217ENST00000478743 ANKUB1A6NFN9 424 aa12.34□□□□□ -0.43
HDAC8-217ENST00000478743 A8MU76 341 aa12.34□□□□□ -0.43
HDAC8-217ENST00000478743 KATNA1O75449 491 aa12.34□□□□□ -0.43
HDAC8-217ENST00000478743 TXLNAP40222 546 aa12.34□□□□□ -0.43
HDAC8-217ENST00000478743 VAMP7P51809 220 aa12.34□□□□□ -0.43
HDAC8-217ENST00000478743 MC2RQ01718 297 aa12.34□□□□□ -0.43
HDAC8-217ENST00000478743 AUHQ13825 339 aaKnown RBP12.34□□□□□ -0.43
HDAC8-217ENST00000478743 ZRSR2Q15696 482 aaKnown RBP12.34□□□□□ -0.43
HDAC8-217ENST00000478743 SNAP47Q5SQN1 464 aa12.34□□□□□ -0.43
HDAC8-217ENST00000478743 TTC39BQ5VTQ0 682 aaPredicted RBP12.34□□□□□ -0.43
HDAC8-217ENST00000478743 GDF7Q7Z4P5 450 aa12.34□□□□□ -0.43
HDAC8-217ENST00000478743 ZNF761Q86XN6 746 aaPredicted RBP12.34□□□□□ -0.43
HDAC8-217ENST00000478743 IRF2BP1Q8IU81 584 aa12.34□□□□□ -0.43
HDAC8-217ENST00000478743 PLA2G15Q8NCC3 412 aa12.34□□□□□ -0.43
HDAC8-217ENST00000478743 OR7D4Q8NG98 312 aa12.34□□□□□ -0.43
HDAC8-217ENST00000478743 FAM149B1Q96BN6 582 aa12.34□□□□□ -0.43
HDAC8-217ENST00000478743 TEFMQ96QE5 360 aaKnown RBP12.34□□□□□ -0.43
HDAC8-217ENST00000478743 TWSG1Q9GZX9 223 aa12.34□□□□□ -0.43
HDAC8-217ENST00000478743 BLZF1Q9H2G9 400 aa12.34□□□□□ -0.43
HDAC8-217ENST00000478743 TBC1D30Q9Y2I9 924 aa12.34□□□□□ -0.43
HDAC8-217ENST00000478743 SYNJ2BP-COX16A0A087WUM0 186 aa12.33□□□□□ -0.44
HDAC8-217ENST00000478743 RHPN2P1A8MT19 583 aa12.33□□□□□ -0.44
HDAC8-217ENST00000478743 H3BQV1 296 aa12.33□□□□□ -0.44
HDAC8-217ENST00000478743 IKBKBO14920 756 aa12.33□□□□□ -0.44
HDAC8-217ENST00000478743 PPM1DO15297 605 aa12.33□□□□□ -0.44
HDAC8-217ENST00000478743 TM7SF2O76062 418 aa12.33□□□□□ -0.44
HDAC8-217ENST00000478743 ECEL1O95672 775 aa12.33□□□□□ -0.44
HDAC8-217ENST00000478743 TRUB2O95900 331 aaKnown RBP12.33□□□□□ -0.44
HDAC8-217ENST00000478743 CD160O95971 181 aa12.33□□□□□ -0.44
HDAC8-217ENST00000478743 TNFP01375 233 aa12.33□□□□□ -0.44
HDAC8-217ENST00000478743 NR3C1P04150 777 aa12.33□□□□□ -0.44
HDAC8-217ENST00000478743 PCCBP05166 539 aa12.33□□□□□ -0.44
HDAC8-217ENST00000478743 RHOCP08134 193 aa12.33□□□□□ -0.44
HDAC8-217ENST00000478743 DNA2P51530 1060 aa12.33□□□□□ -0.44
HDAC8-217ENST00000478743 INPP5AQ14642 412 aa12.33□□□□□ -0.44
HDAC8-217ENST00000478743 PAPD7Q5XG87 772 aaKnown RBP12.33□□□□□ -0.44
HDAC8-217ENST00000478743 FAM173BQ6P4H8 233 aa12.33□□□□□ -0.44
HDAC8-217ENST00000478743 ZSCAN30Q86W11 494 aa12.33□□□□□ -0.44
HDAC8-217ENST00000478743 NRROSQ86YC3 692 aa12.33□□□□□ -0.44
HDAC8-217ENST00000478743 ATP6V0D2Q8N8Y2 350 aa12.33□□□□□ -0.44
HDAC8-217ENST00000478743 DCAF4L2Q8NA75 395 aa12.33□□□□□ -0.44
HDAC8-217ENST00000478743 ZSCAN31Q96LW9 406 aaPredicted RBP12.33□□□□□ -0.44
HDAC8-217ENST00000478743 WDR92Q96MX6 357 aa12.33□□□□□ -0.44
HDAC8-217ENST00000478743 KCTD10Q9H3F6 313 aa12.33□□□□□ -0.44
HDAC8-217ENST00000478743 SUDS3Q9H7L9 328 aaPredicted RBP12.33□□□□□ -0.44
HDAC8-217ENST00000478743 SLAMF7Q9NQ25 335 aa12.33□□□□□ -0.44
HDAC8-217ENST00000478743 COX16Q9P0S2 106 aa12.33□□□□□ -0.44
HDAC8-217ENST00000478743 CGNQ9P2M7 1197 aaKnown RBP12.33□□□□□ -0.44
HDAC8-217ENST00000478743 NTNG1Q9Y2I2 539 aa12.33□□□□□ -0.44
HDAC8-217ENST00000478743 PCDHB3Q9Y5E6 796 aa12.33□□□□□ -0.44
HDAC8-217ENST00000478743 ST14Q9Y5Y6 855 aa12.33□□□□□ -0.44
HDAC8-217ENST00000478743 HS3ST4Q9Y661 456 aa12.33□□□□□ -0.44
HDAC8-217ENST00000478743 DGKBQ9Y6T7 804 aa12.33□□□□□ -0.44
HDAC8-217ENST00000478743 M0QYV0 167 aa12.32□□□□□ -0.44
HDAC8-217ENST00000478743 TOR1BO14657 336 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms