RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 SLC35G2Q8TBE7 412 aa18.95■□□□□ 0.62
SREBF1-212ENST00000478616 LRRN4Q8WUT4 740 aa18.95■□□□□ 0.62
SREBF1-212ENST00000478616 RAPGEF5Q92565 580 aa18.95■□□□□ 0.62
SREBF1-212ENST00000478616 SP110Q9HB58 689 aa18.95■□□□□ 0.62
SREBF1-212ENST00000478616 PCDH12Q9NPG4 1184 aa18.95■□□□□ 0.62
SREBF1-212ENST00000478616 DONSONQ9NYP3 566 aa18.95■□□□□ 0.62
SREBF1-212ENST00000478616 RCOR3Q9P2K3 495 aaPredicted RBP18.95■□□□□ 0.62
SREBF1-212ENST00000478616 TFR2Q9UP52 801 aa18.95■□□□□ 0.62
SREBF1-212ENST00000478616 COQ6Q9Y2Z9 468 aa18.95■□□□□ 0.62
SREBF1-212ENST00000478616 CACNA1BQ00975 2339 aa18.95■□□□□ 0.62
SREBF1-212ENST00000478616 C3orf70A6NLC5 250 aaPredicted RBP18.94■□□□□ 0.62
SREBF1-212ENST00000478616 TRIM38O00635 465 aa18.94■□□□□ 0.62
SREBF1-212ENST00000478616 RIOK3O14730 519 aaKnown RBP18.94■□□□□ 0.62
SREBF1-212ENST00000478616 AKR1B10O60218 316 aa18.94■□□□□ 0.62
SREBF1-212ENST00000478616 MAP3K6O95382 1288 aa18.94■□□□□ 0.62
SREBF1-212ENST00000478616 MAN1A1P33908 653 aa18.94■□□□□ 0.62
SREBF1-212ENST00000478616 NSUN2Q08J23 767 aaKnown RBP eCLIP18.94■□□□□ 0.62
SREBF1-212ENST00000478616 LBRQ14739 615 aaKnown RBP18.94■□□□□ 0.62
SREBF1-212ENST00000478616 PAFAH1B3Q15102 231 aaKnown RBP18.94■□□□□ 0.62
SREBF1-212ENST00000478616 TCEAL1Q15170 157 aa18.94■□□□□ 0.62
SREBF1-212ENST00000478616 UGP2Q16851 508 aa18.94■□□□□ 0.62
SREBF1-212ENST00000478616 SLC45A4Q5BKX6 768 aa18.94■□□□□ 0.62
SREBF1-212ENST00000478616 HCAR2Q8TDS4 363 aa18.94■□□□□ 0.62
SREBF1-212ENST00000478616 CTNNBL1Q8WYA6 563 aaPredicted RBP18.94■□□□□ 0.62
SREBF1-212ENST00000478616 ZNF599Q96NL3 588 aa18.94■□□□□ 0.62
SREBF1-212ENST00000478616 ASXL3Q9C0F0 2248 aa18.94■□□□□ 0.62
SREBF1-212ENST00000478616 AKR1B15C9JRZ8 316 aaPredicted RBP18.93■□□□□ 0.62
SREBF1-212ENST00000478616 GJC1P36383 396 aa18.93■□□□□ 0.62
SREBF1-212ENST00000478616 MMP12P39900 470 aa18.93■□□□□ 0.62
SREBF1-212ENST00000478616 GALNT2Q10471 571 aa18.93■□□□□ 0.62
SREBF1-212ENST00000478616 EIF2B5Q13144 721 aaKnown RBP18.93■□□□□ 0.62
SREBF1-212ENST00000478616 DNAJC3Q13217 504 aa18.93■□□□□ 0.62
SREBF1-212ENST00000478616 RFTN1Q14699 578 aaPredicted RBP18.93■□□□□ 0.62
SREBF1-212ENST00000478616 SUZ12Q15022 739 aaKnown RBP18.93■□□□□ 0.62
SREBF1-212ENST00000478616 PTPRRQ15256 657 aa18.93■□□□□ 0.62
SREBF1-212ENST00000478616 ANKRD20A8PQ5CZ79 823 aa18.93■□□□□ 0.62
SREBF1-212ENST00000478616 ZNF542PQ5EBM4 170 aa18.93■□□□□ 0.62
SREBF1-212ENST00000478616 TMCO4Q5TGY1 634 aa18.93■□□□□ 0.62
SREBF1-212ENST00000478616 TEX26Q8N6G2 289 aa18.93■□□□□ 0.62
SREBF1-212ENST00000478616 EID2Q8N6I1 236 aa18.93■□□□□ 0.62
SREBF1-212ENST00000478616 SKA1Q96BD8 255 aa18.93■□□□□ 0.62
SREBF1-212ENST00000478616 ZNF641Q96N77 438 aaPredicted RBP18.93■□□□□ 0.62
SREBF1-212ENST00000478616 TUBGCP5Q96RT8 1024 aa18.93■□□□□ 0.62
SREBF1-212ENST00000478616 MGME1Q9BQP7 344 aa18.93■□□□□ 0.62
SREBF1-212ENST00000478616 WRAP53Q9BUR4 548 aaKnown RBP18.93■□□□□ 0.62
SREBF1-212ENST00000478616 CINPQ9BW66 212 aaPredicted RBP18.93■□□□□ 0.62
SREBF1-212ENST00000478616 NEUROG3Q9Y4Z2 214 aa18.93■□□□□ 0.62
SREBF1-212ENST00000478616 PCDHB9Q9Y5E1 797 aa18.93■□□□□ 0.62
SREBF1-212ENST00000478616 KNTC1P50748 2209 aa18.92■□□□□ 0.62
SREBF1-212ENST00000478616 A6NNZ2 444 aa18.92■□□□□ 0.62
SREBF1-212ENST00000478616 HTRA2O43464 458 aaPredicted RBP18.92■□□□□ 0.62
SREBF1-212ENST00000478616 LCA5LO95447 670 aa18.92■□□□□ 0.62
SREBF1-212ENST00000478616 ZNF75DP51815 510 aa18.92■□□□□ 0.62
SREBF1-212ENST00000478616 MAXP61244 160 aa18.92■□□□□ 0.62
SREBF1-212ENST00000478616 GBE1Q04446 702 aa18.92■□□□□ 0.62
SREBF1-212ENST00000478616 RAD51Q06609 339 aa18.92■□□□□ 0.62
SREBF1-212ENST00000478616 MESDQ14696 234 aa18.92■□□□□ 0.62
SREBF1-212ENST00000478616 KCTD16Q68DU8 428 aa18.92■□□□□ 0.62
SREBF1-212ENST00000478616 CNGA4Q8IV77 575 aa18.92■□□□□ 0.62
SREBF1-212ENST00000478616 DENND6BQ8NEG7 585 aa18.92■□□□□ 0.62
SREBF1-212ENST00000478616 SPOCK2Q92563 424 aa18.92■□□□□ 0.62
SREBF1-212ENST00000478616 CDC6Q99741 560 aa18.92■□□□□ 0.62
SREBF1-212ENST00000478616 ZNF670Q9BS34 389 aa18.92■□□□□ 0.62
SREBF1-212ENST00000478616 CALN1Q9BXU9 219 aa18.92■□□□□ 0.62
SREBF1-212ENST00000478616 TRIM5Q9C035 493 aa18.92■□□□□ 0.62
SREBF1-212ENST00000478616 MSRB2Q9Y3D2 182 aa18.92■□□□□ 0.62
SREBF1-212ENST00000478616 HYOU1Q9Y4L1 999 aa18.92■□□□□ 0.62
SREBF1-212ENST00000478616 ZZEF1O43149 2961 aa18.92■□□□□ 0.62
SREBF1-212ENST00000478616 LY6G6EA0A0G2JKS1 128 aa18.91■□□□□ 0.62
SREBF1-212ENST00000478616 SPTY2D1-AS1A0A0U1RR47 76 aa18.91■□□□□ 0.62
SREBF1-212ENST00000478616 TMEM110-MUSTN1A8MSY1 372 aa18.91■□□□□ 0.62
SREBF1-212ENST00000478616 TNFSF14O43557 240 aa18.91■□□□□ 0.62
SREBF1-212ENST00000478616 PIAS2O75928 621 aa18.91■□□□□ 0.62
SREBF1-212ENST00000478616 ITGAVP06756 1048 aa18.91■□□□□ 0.62
SREBF1-212ENST00000478616 FECHP22830 423 aa18.91■□□□□ 0.62
SREBF1-212ENST00000478616 DGKAP23743 735 aa18.91■□□□□ 0.62
SREBF1-212ENST00000478616 KDELR1P24390 212 aa18.91■□□□□ 0.62
SREBF1-212ENST00000478616 ARRB1P49407 418 aaPredicted RBP18.91■□□□□ 0.62
SREBF1-212ENST00000478616 SCNN1BP51168 640 aa18.91■□□□□ 0.62
SREBF1-212ENST00000478616 CLDN6P56747 220 aa18.91■□□□□ 0.62
SREBF1-212ENST00000478616 TRAF2Q12933 501 aa18.91■□□□□ 0.62
SREBF1-212ENST00000478616 KRT81Q14533 505 aa18.91■□□□□ 0.62
SREBF1-212ENST00000478616 WSCD2Q2TBF2 565 aa18.91■□□□□ 0.62
SREBF1-212ENST00000478616 PROX2Q3B8N5 592 aa18.91■□□□□ 0.62
SREBF1-212ENST00000478616 PTAR1Q7Z6K3 402 aaPredicted RBP18.91■□□□□ 0.62
SREBF1-212ENST00000478616 PELI3Q8N2H9 469 aa18.91■□□□□ 0.62
SREBF1-212ENST00000478616 OXR1Q8N573 874 aa18.91■□□□□ 0.62
SREBF1-212ENST00000478616 PLD5Q8N7P1 536 aa18.91■□□□□ 0.62
SREBF1-212ENST00000478616 RFFLQ8WZ73 363 aa18.91■□□□□ 0.62
SREBF1-212ENST00000478616 MAML1Q92585 1016 aa18.91■□□□□ 0.62
SREBF1-212ENST00000478616 CCDC42Q96M95 316 aa18.91■□□□□ 0.62
SREBF1-212ENST00000478616 SMIM14Q96QK8 99 aa18.91■□□□□ 0.62
SREBF1-212ENST00000478616 TCEAL2Q9H3H9 227 aaPredicted RBP18.91■□□□□ 0.62
SREBF1-212ENST00000478616 DEF6Q9H4E7 631 aa18.91■□□□□ 0.62
SREBF1-212ENST00000478616 NOD2Q9HC29 1040 aa18.91■□□□□ 0.62
SREBF1-212ENST00000478616 SEPT3Q9UH03 358 aa18.91■□□□□ 0.62
SREBF1-212ENST00000478616 ATP8A1Q9Y2Q0 1164 aa18.91■□□□□ 0.62
SREBF1-212ENST00000478616 U3KQA8 63 aa18.91■□□□□ 0.62
SREBF1-212ENST00000478616 YKT6O15498 198 aa18.9■□□□□ 0.62
SREBF1-212ENST00000478616 MAGEC1O60732 1142 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms