RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 APOC2P02655 101 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 ZNF806P0C7X5 589 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 ITIH2P19823 946 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 DPP6P42658 865 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 MAPK8P45983 427 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 ATP5OP48047 213 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 CSNK1DP48730 415 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 NR2C2P49116 596 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 OTUD4Q01804 1114 aaKnown RBP6.96□□□□□ -1.3
BRCA1-215ENST00000478531 DSC2Q02487 901 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 CCDC173Q0VFZ6 552 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 CSRP2Q16527 193 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 DUOXA1Q1HG43 343 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 SEL1L2Q5TEA6 688 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 SEL1L3Q68CR1 1132 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 BZW1Q7L1Q6 419 aaKnown RBP6.96□□□□□ -1.3
BRCA1-215ENST00000478531 RABEPKQ7Z6M1 372 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 ZSWIM9Q86XI8 627 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 TEX26Q8N6G2 289 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 TRIM58Q8NG06 486 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 ZNF592Q92610 1267 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 FAM131CQ96AQ9 280 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 SERAC1Q96JX3 654 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 NSMCE3Q96MG7 304 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 ZNF641Q96N77 438 aaPredicted RBP6.96□□□□□ -1.3
BRCA1-215ENST00000478531 SLC6A18Q96N87 628 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 AGAP3Q96P47 875 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 QKIQ96PU8 341 aaKnown RBP eCLIP6.96□□□□□ -1.3
BRCA1-215ENST00000478531 NUDCD1Q96RS6 583 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 WRAP53Q9BUR4 548 aaKnown RBP6.96□□□□□ -1.3
BRCA1-215ENST00000478531 GTPBP2Q9BX10 602 aaKnown RBP6.96□□□□□ -1.3
BRCA1-215ENST00000478531 NUSAP1Q9BXS6 441 aaKnown RBP6.96□□□□□ -1.3
BRCA1-215ENST00000478531 KDM4CQ9H3R0 1056 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 C10orf88Q9H8K7 445 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 EBF2Q9HAK2 575 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 FZD3Q9NPG1 666 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 AASDHPPTQ9NRN7 309 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 RXFP3Q9NSD7 469 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 SUSD2Q9UGT4 822 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 FADS3Q9Y5Q0 445 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 A0A1B0GTW7 788 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-215ENST00000478531 A0A1W2PPC4 97 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 GOLGA6L9A6NEM1 432 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 A8MX80 341 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 UPK3BL1B0FP48 263 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 UPK3BL2E5RIL1 263 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 KCNK3O14649 394 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 SLC31A1O15431 190 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 SPINT1O43278 529 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 ZSCAN12O43309 604 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 TJP3O95049 919 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 CPP00450 1065 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 TIMP2P16035 220 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 CR2P20023 1033 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 TGM1P22735 817 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 CD27P26842 260 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 PTPN7P35236 360 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 HOXD12P35452 270 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 CD86P42081 329 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 CSNK1EP49674 416 aaKnown RBP6.95□□□□□ -1.3
BRCA1-215ENST00000478531 CCR5P51681 352 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 AFF3P51826 1226 aaKnown RBP6.95□□□□□ -1.3
BRCA1-215ENST00000478531 FAM193AP78312 1265 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 IRX4P78413 519 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 IFI35P80217 286 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-215ENST00000478531 TRAF2Q12933 501 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 PRKD1Q15139 912 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-215ENST00000478531 RPS6KA1Q15418 735 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 SETMARQ53H47 684 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-215ENST00000478531 MEI1Q5TIA1 1274 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 PEAR1Q5VY43 1037 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-215ENST00000478531 ERAP2Q6P179 960 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 BRAT1Q6PJG6 821 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 ZNF662Q6ZS27 426 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 PRPF39Q86UA1 669 aaKnown RBP6.95□□□□□ -1.3
BRCA1-215ENST00000478531 TRIM69Q86WT6 500 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 HORMAD1Q86X24 394 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 CEP76Q8TAP6 659 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 ACTL9Q8TC94 416 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 CXorf40AQ8TE69 158 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 DNASE2BQ8WZ79 361 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 RAB7BQ96AH8 199 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 EDEM2Q9BV94 578 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 TM9SF3Q9HD45 589 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 PCDH12Q9NPG4 1184 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 DKK3Q9UBP4 350 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 ZFR2Q9UPR6 939 aaKnown RBP6.95□□□□□ -1.3
BRCA1-215ENST00000478531 CA5BQ9Y2D0 317 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 PCDHB9Q9Y5E1 797 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 CEP295Q9C0D2 2601 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-215ENST00000478531 TCRBV7S2A1N4TA0A589 114 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 TSPAN11A1L157 253 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 IGLON5A6NGN9 336 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 GOLGA8CPA6NN73 597 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 TRAFD1O14545 582 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-215ENST00000478531 ENC1O14682 589 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 LATO43561 262 aa6.95□□□□□ -1.3
BRCA1-215ENST00000478531 AP1G1O43747 822 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms