RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 STN1Q9H668 368 aaKnown RBP14.3□□□□□ -0.12
NPHP4-208ENST00000478423 SLC45A1Q9Y2W3 748 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 TMEM63AO94886 807 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 SNAI1O95863 264 aaPredicted RBP14.3□□□□□ -0.12
NPHP4-208ENST00000478423 CREB1P16220 341 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 PBX3P40426 434 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 ANXA11P50995 505 aaKnown RBP14.3□□□□□ -0.12
NPHP4-208ENST00000478423 NCALDP61601 193 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 CES5AQ6NT32 575 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 ADGRD1Q6QNK2 874 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 FAM151BQ6UXP7 276 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 REM2Q8IYK8 340 aaPredicted RBP14.3□□□□□ -0.12
NPHP4-208ENST00000478423 ZNF614Q8N883 585 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 PYDC1Q8WXC3 89 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 PNPOQ9NVS9 261 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 FCGR1AP12314 374 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 DPYSL2Q16555 572 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 ZNF697Q5TEC3 545 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 PRMT9Q6P2P2 845 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 ZDHHC24Q6UX98 284 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 CRELD2Q6UXH1 353 aaPredicted RBP14.3□□□□□ -0.12
NPHP4-208ENST00000478423 C11orf74Q86VG3 221 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 ECHDC2Q86YB7 292 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 NAT16Q8N8M0 369 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 OR6Y1Q8NGX8 325 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 MTFMTQ96DP5 389 aaKnown RBP14.3□□□□□ -0.12
NPHP4-208ENST00000478423 SCLYQ96I15 445 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 TBATAQ96M53 351 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 COMMD8Q9NX08 183 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 TRPC4Q9UBN4 977 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 SIX4Q9UIU6 781 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 CNTRLQ7Z7A1 2325 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 UNCXA6NJT0 531 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 ACSL4O60488 711 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 NDST3O95803 873 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 RAD23AP54725 363 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 PWP1Q13610 501 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 FAM98BQ52LJ0 330 aaKnown RBP14.29□□□□□ -0.12
NPHP4-208ENST00000478423 PPM1JQ5JR12 505 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 CNSTQ6PJW8 725 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 LINGO4Q6UY18 593 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 PACS2Q86VP3 889 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 ATG16L2Q8NAA4 619 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 PIK3R5Q8WYR1 880 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 RNF145Q96MT1 663 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 CXorf56Q9H5V9 222 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 LIMD1Q9UGP4 676 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 STYXL1Q9Y6J8 313 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 PTPRJQ12913 1337 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 HGFP14210 728 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 POU1F1P28069 291 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 CCT8P50990 548 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 NEK3P51956 506 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 ZNF572Q7Z3I7 529 aaPredicted RBP14.29□□□□□ -0.12
NPHP4-208ENST00000478423 NECAB2Q7Z6G3 386 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 RNPEPL1Q9HAU8 725 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 H2AFY2Q9P0M6 372 aaPredicted RBP14.29□□□□□ -0.12
NPHP4-208ENST00000478423 MAP1BP46821 2468 aaKnown RBP14.29□□□□□ -0.12
NPHP4-208ENST00000478423 C15orf38-AP3S2A0A0A6YYH1 394 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 M0R3G1 203 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 CCL22O00626 93 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 ENTPD5O75356 428 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 ULK1O75385 1050 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 DEAF1O75398 565 aaPredicted RBP14.29□□□□□ -0.12
NPHP4-208ENST00000478423 PARNO95453 639 aaKnown RBP14.29□□□□□ -0.12
NPHP4-208ENST00000478423 MLYCDO95822 493 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 SERPINB10P48595 397 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 GPR15P49685 360 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 ATP6V0D1P61421 351 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 GNA12Q03113 381 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 CSTF3Q12996 717 aaKnown RBP14.29□□□□□ -0.12
NPHP4-208ENST00000478423 HNRNPDQ14103 355 aaKnown RBP14.29□□□□□ -0.12
NPHP4-208ENST00000478423 UBAP2LQ14157 1087 aaKnown RBP14.29□□□□□ -0.12
NPHP4-208ENST00000478423 NUP188Q5SRE5 1749 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 GDF6Q6KF10 455 aaPredicted RBP14.29□□□□□ -0.12
NPHP4-208ENST00000478423 PRSS55Q6UWB4 352 aaPredicted RBP14.29□□□□□ -0.12
NPHP4-208ENST00000478423 LRRC74BQ6ZQY2 392 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 ZNF621Q6ZSS3 439 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 ARPINQ7Z6K5 226 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 ALYREFQ86V81 257 aaKnown RBP14.29□□□□□ -0.12
NPHP4-208ENST00000478423 RDH11Q8TC12 318 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 BORCS6Q96GS4 357 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 TBCDQ9BTW9 1192 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 SLC25A51Q9H1U9 297 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 TMCC3Q9ULS5 477 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 FZD10Q9ULW2 581 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 BTRCQ9Y297 605 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 SNX8Q9Y5X2 465 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 MATN3O15232 486 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 HTR7P34969 479 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 CRHR1P34998 444 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 GPR158Q5T848 1215 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 TRMT10BQ6PF06 316 aaKnown RBP14.29□□□□□ -0.12
NPHP4-208ENST00000478423 LDB1Q86U70 411 aaPredicted RBP14.29□□□□□ -0.12
NPHP4-208ENST00000478423 CIR1Q86X95 450 aaPredicted RBP14.29□□□□□ -0.12
NPHP4-208ENST00000478423 ZC3H3Q8IXZ2 948 aaKnown RBP14.29□□□□□ -0.12
NPHP4-208ENST00000478423 SPPL2AQ8TCT8 520 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 LINGO1Q96FE5 620 aa14.29□□□□□ -0.12
NPHP4-208ENST00000478423 FUBP3Q96I24 572 aaKnown RBP eCLIP14.29□□□□□ -0.12
NPHP4-208ENST00000478423 PPP1R16AQ96I34 528 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms