RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	SEPT3	Q9UH03	358 aa		13.94	□□□□□ -0.18
HDAC7-222	ENST00000477937	ZMIZ1	Q9ULJ6	1067 aa		13.94	□□□□□ -0.18
HDAC7-222	ENST00000477937	NENF	Q9UMX5	172 aa		13.94	□□□□□ -0.18
HDAC7-222	ENST00000477937	SPTY2D1-AS1	A0A0U1RR47	76 aa		13.93	□□□□□ -0.18
HDAC7-222	ENST00000477937	SSU72P8	A0A1W2PR75	194 aa		13.93	□□□□□ -0.18
HDAC7-222	ENST00000477937	TSPAN11	A1L157	253 aa		13.93	□□□□□ -0.18
HDAC7-222	ENST00000477937	NEMP2	A6NFY4	417 aa		13.93	□□□□□ -0.18
HDAC7-222	ENST00000477937	AKR1B10	O60218	316 aa		13.93	□□□□□ -0.18
HDAC7-222	ENST00000477937	RFPL3	O75679	317 aa		13.93	□□□□□ -0.18
HDAC7-222	ENST00000477937	RGR	P47804	291 aa		13.93	□□□□□ -0.18
HDAC7-222	ENST00000477937	SCNN1B	P51168	640 aa		13.93	□□□□□ -0.18
HDAC7-222	ENST00000477937	CDH6	P55285	790 aa		13.93	□□□□□ -0.18
HDAC7-222	ENST00000477937	HNRNPK	P61978	463 aa	Known RBP eCLIP	13.93	□□□□□ -0.18	6e-8	■■■■□ 25.9
HDAC7-222	ENST00000477937	POLR2L	P62875	67 aa	Known RBP	13.93	□□□□□ -0.18
HDAC7-222	ENST00000477937	BCL2L1	Q07817	233 aa		13.93	□□□□□ -0.18
HDAC7-222	ENST00000477937	DNAJC3	Q13217	504 aa		13.93	□□□□□ -0.18
HDAC7-222	ENST00000477937	ZNF211	Q13398	564 aa	Predicted RBP	13.93	□□□□□ -0.18
HDAC7-222	ENST00000477937	PDE1C	Q14123	709 aa	Predicted RBP	13.93	□□□□□ -0.18
HDAC7-222	ENST00000477937	FZD2	Q14332	565 aa		13.93	□□□□□ -0.18
HDAC7-222	ENST00000477937	LBR	Q14739	615 aa	Known RBP	13.93	□□□□□ -0.18
HDAC7-222	ENST00000477937	ASTE1	Q2TB18	679 aa	Predicted RBP	13.93	□□□□□ -0.18
HDAC7-222	ENST00000477937	TMCO4	Q5TGY1	634 aa		13.93	□□□□□ -0.18
HDAC7-222	ENST00000477937	DHRS13	Q6UX07	377 aa		13.93	□□□□□ -0.18
HDAC7-222	ENST00000477937	VSTM4	Q8IW00	320 aa		13.93	□□□□□ -0.18
HDAC7-222	ENST00000477937	PAF1	Q8N7H5	531 aa		13.93	□□□□□ -0.18
HDAC7-222	ENST00000477937	NSMCE1	Q8WV22	266 aa		13.93	□□□□□ -0.18
HDAC7-222	ENST00000477937	ZCCHC14	Q8WYQ9	949 aa	Known RBP	13.93	□□□□□ -0.18
HDAC7-222	ENST00000477937	TSC1	Q92574	1164 aa		13.93	□□□□□ -0.18
HDAC7-222	ENST00000477937	PSKH2	Q96QS6	385 aa		13.93	□□□□□ -0.18
HDAC7-222	ENST00000477937	PCDH18	Q9HCL0	1135 aa		13.93	□□□□□ -0.18
HDAC7-222	ENST00000477937	PCDH12	Q9NPG4	1184 aa		13.93	□□□□□ -0.18
HDAC7-222	ENST00000477937	ABHD10	Q9NUJ1	306 aa		13.93	□□□□□ -0.18
HDAC7-222	ENST00000477937	RCOR3	Q9P2K3	495 aa	Predicted RBP	13.93	□□□□□ -0.18
HDAC7-222	ENST00000477937	LCMT1	Q9UIC8	334 aa		13.93	□□□□□ -0.18
HDAC7-222	ENST00000477937		H3BM21	787 aa		13.92	□□□□□ -0.18
HDAC7-222	ENST00000477937	TRIM38	O00635	465 aa		13.92	□□□□□ -0.18
HDAC7-222	ENST00000477937	TOR1B	O14657	336 aa		13.92	□□□□□ -0.18
HDAC7-222	ENST00000477937	RIOK3	O14730	519 aa	Known RBP	13.92	□□□□□ -0.18
HDAC7-222	ENST00000477937	CSF2	P04141	144 aa		13.92	□□□□□ -0.18
HDAC7-222	ENST00000477937	THOP1	P52888	689 aa		13.92	□□□□□ -0.18
HDAC7-222	ENST00000477937	PFN3	P60673	137 aa		13.92	□□□□□ -0.18
HDAC7-222	ENST00000477937	AP1S1	P61966	158 aa		13.92	□□□□□ -0.18
HDAC7-222	ENST00000477937	YPEL5	P62699	121 aa		13.92	□□□□□ -0.18
HDAC7-222	ENST00000477937	SLC10A7	Q0GE19	358 aa		13.92	□□□□□ -0.18
HDAC7-222	ENST00000477937	PTK2B	Q14289	1009 aa		13.92	□□□□□ -0.18
HDAC7-222	ENST00000477937	ZNF235	Q14590	738 aa		13.92	□□□□□ -0.18
HDAC7-222	ENST00000477937	SMAD1	Q15797	465 aa	Known RBP	13.92	□□□□□ -0.18
HDAC7-222	ENST00000477937	ZNF542P	Q5EBM4	170 aa		13.92	□□□□□ -0.18
HDAC7-222	ENST00000477937	PARG	Q86W56	976 aa		13.92	□□□□□ -0.18
HDAC7-222	ENST00000477937	BBS5	Q8N3I7	341 aa		13.92	□□□□□ -0.18
HDAC7-222	ENST00000477937	OR4C6	Q8NH72	309 aa		13.92	□□□□□ -0.18
HDAC7-222	ENST00000477937	FAM71B	Q8TC56	605 aa		13.92	□□□□□ -0.18
HDAC7-222	ENST00000477937	UCKL1	Q9NWZ5	548 aa		13.92	□□□□□ -0.18
HDAC7-222	ENST00000477937	ATP8A1	Q9Y2Q0	1164 aa		13.92	□□□□□ -0.18
HDAC7-222	ENST00000477937	CACNA1B	Q00975	2339 aa		13.92	□□□□□ -0.18
HDAC7-222	ENST00000477937	SPEG	Q15772	3267 aa		13.92	□□□□□ -0.18
HDAC7-222	ENST00000477937	FRY	Q5TBA9	3013 aa		13.92	□□□□□ -0.18
HDAC7-222	ENST00000477937	AKAP13	Q12802	2813 aa		13.91	□□□□□ -0.18
HDAC7-222	ENST00000477937	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	13.91	□□□□□ -0.18
HDAC7-222	ENST00000477937	MUSK	O15146	869 aa		13.91	□□□□□ -0.18
HDAC7-222	ENST00000477937	SIGLEC6	O43699	453 aa		13.91	□□□□□ -0.18
HDAC7-222	ENST00000477937	MAFK	O60675	156 aa		13.91	□□□□□ -0.18
HDAC7-222	ENST00000477937	PROSC	O94903	275 aa		13.91	□□□□□ -0.18
HDAC7-222	ENST00000477937	TMEM253	P0C7T8	217 aa		13.91	□□□□□ -0.18
HDAC7-222	ENST00000477937	ALPPL2	P10696	532 aa		13.91	□□□□□ -0.18
HDAC7-222	ENST00000477937	NME1	P15531	152 aa	Known RBP	13.91	□□□□□ -0.18
HDAC7-222	ENST00000477937	IL4R	P24394	825 aa		13.91	□□□□□ -0.18
HDAC7-222	ENST00000477937	IGFALS	P35858	605 aa		13.91	□□□□□ -0.18
HDAC7-222	ENST00000477937	GJC1	P36383	396 aa		13.91	□□□□□ -0.18
HDAC7-222	ENST00000477937	HSPA9	P38646	679 aa	Known RBP	13.91	□□□□□ -0.18
HDAC7-222	ENST00000477937	MMP12	P39900	470 aa		13.91	□□□□□ -0.18
HDAC7-222	ENST00000477937	ACADVL	P49748	655 aa		13.91	□□□□□ -0.18
HDAC7-222	ENST00000477937	ADK	P55263	362 aa	Known RBP	13.91	□□□□□ -0.18
HDAC7-222	ENST00000477937	MMRN1	Q13201	1228 aa		13.91	□□□□□ -0.18
HDAC7-222	ENST00000477937	ILK	Q13418	452 aa		13.91	□□□□□ -0.18
HDAC7-222	ENST00000477937	LRRC14	Q15048	493 aa		13.91	□□□□□ -0.18
HDAC7-222	ENST00000477937	ATP13A4	Q4VNC1	1196 aa		13.91	□□□□□ -0.18
HDAC7-222	ENST00000477937	TMPRSS12	Q86WS5	348 aa		13.91	□□□□□ -0.18
HDAC7-222	ENST00000477937	LRRC49	Q8IUZ0	686 aa		13.91	□□□□□ -0.18
HDAC7-222	ENST00000477937	MAP7D3	Q8IWC1	876 aa		13.91	□□□□□ -0.18
HDAC7-222	ENST00000477937	ATPAF2	Q8N5M1	289 aa		13.91	□□□□□ -0.18
HDAC7-222	ENST00000477937	TP53I13	Q8NBR0	393 aa	Predicted RBP	13.91	□□□□□ -0.18
HDAC7-222	ENST00000477937	KCTD6	Q8NC69	237 aa		13.91	□□□□□ -0.18
HDAC7-222	ENST00000477937	ECHDC3	Q96DC8	303 aa		13.91	□□□□□ -0.18
HDAC7-222	ENST00000477937	CCDC42	Q96M95	316 aa		13.91	□□□□□ -0.18
HDAC7-222	ENST00000477937	CHP1	Q99653	195 aa		13.91	□□□□□ -0.18
HDAC7-222	ENST00000477937	PACSIN1	Q9BY11	444 aa		13.91	□□□□□ -0.18
HDAC7-222	ENST00000477937	MBNL1	Q9NR56	388 aa	Known RBP	13.91	□□□□□ -0.18
HDAC7-222	ENST00000477937	NLGN3	Q9NZ94	848 aa		13.91	□□□□□ -0.18
HDAC7-222	ENST00000477937	COQ6	Q9Y2Z9	468 aa		13.91	□□□□□ -0.18
HDAC7-222	ENST00000477937	KNTC1	P50748	2209 aa		13.91	□□□□□ -0.18
HDAC7-222	ENST00000477937	CFAP69	A5D8W1	941 aa		13.9	□□□□□ -0.18
HDAC7-222	ENST00000477937	SCAMP1	O15126	338 aa		13.9	□□□□□ -0.18
HDAC7-222	ENST00000477937	FFAR2	O15552	330 aa		13.9	□□□□□ -0.18
HDAC7-222	ENST00000477937	LZTS3	O60299	673 aa	Predicted RBP	13.9	□□□□□ -0.18
HDAC7-222	ENST00000477937	MFAP3L	O75121	409 aa		13.9	□□□□□ -0.18
HDAC7-222	ENST00000477937	KRT37	O76014	449 aa		13.9	□□□□□ -0.18
HDAC7-222	ENST00000477937	PEX11B	O96011	259 aa		13.9	□□□□□ -0.18
HDAC7-222	ENST00000477937	KRT7	P08729	469 aa		13.9	□□□□□ -0.18
HDAC7-222	ENST00000477937	CD48	P09326	243 aa		13.9	□□□□□ -0.18

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