RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 OGNP20774 298 aaKnown RBP8□□□□□ -1.13
VMA21-203ENST00000477649 CTNNB1P35222 781 aa8□□□□□ -1.13
VMA21-203ENST00000477649 SERPINB5P36952 375 aa8□□□□□ -1.13
VMA21-203ENST00000477649 MAGEA9P43362 315 aa8□□□□□ -1.13
VMA21-203ENST00000477649 LEPRP48357 1165 aaKnown RBP8□□□□□ -1.13
VMA21-203ENST00000477649 CSRP3P50461 194 aa8□□□□□ -1.13
VMA21-203ENST00000477649 RASSF2P50749 326 aa8□□□□□ -1.13
VMA21-203ENST00000477649 PRAMEP78395 509 aa8□□□□□ -1.13
VMA21-203ENST00000477649 TMPRSS15P98073 1019 aa8□□□□□ -1.13
VMA21-203ENST00000477649 DSC2Q02487 901 aa8□□□□□ -1.13
VMA21-203ENST00000477649 STX3Q13277 289 aa8□□□□□ -1.13
VMA21-203ENST00000477649 MSLNQ13421 630 aaPredicted RBP8□□□□□ -1.13
VMA21-203ENST00000477649 CDH18Q13634 790 aa8□□□□□ -1.13
VMA21-203ENST00000477649 SEPT6Q14141 434 aa8□□□□□ -1.13
VMA21-203ENST00000477649 DMC1Q14565 340 aa8□□□□□ -1.13
VMA21-203ENST00000477649 USP10Q14694 798 aaKnown RBP8□□□□□ -1.13
VMA21-203ENST00000477649 TAF1AQ15573 450 aaPredicted RBP8□□□□□ -1.13
VMA21-203ENST00000477649 ZKSCAN8Q15776 578 aaPredicted RBP8□□□□□ -1.13
VMA21-203ENST00000477649 CNGA3Q16281 694 aa8□□□□□ -1.13
VMA21-203ENST00000477649 SIRPB2Q5JXA9 342 aa8□□□□□ -1.13
VMA21-203ENST00000477649 RNF219Q5W0B1 726 aaPredicted RBP8□□□□□ -1.13
VMA21-203ENST00000477649 CXorf57Q6NSI4 855 aaKnown RBP8□□□□□ -1.13
VMA21-203ENST00000477649 ESRP1Q6NXG1 681 aaKnown RBP8□□□□□ -1.13
VMA21-203ENST00000477649 RFWD3Q6PCD5 774 aa8□□□□□ -1.13
VMA21-203ENST00000477649 C16orf59Q7L2K0 433 aa8□□□□□ -1.13
VMA21-203ENST00000477649 OTOAQ7RTW8 1153 aa8□□□□□ -1.13
VMA21-203ENST00000477649 CLEC14AQ86T13 490 aa8□□□□□ -1.13
VMA21-203ENST00000477649 CRLF3Q8IUI8 442 aa8□□□□□ -1.13
VMA21-203ENST00000477649 CFAP52Q8N1V2 620 aa8□□□□□ -1.13
VMA21-203ENST00000477649 PGBD5Q8N414 524 aa8□□□□□ -1.13
VMA21-203ENST00000477649 ARMC2Q8NEN0 867 aa8□□□□□ -1.13
VMA21-203ENST00000477649 OR7D4Q8NG98 312 aa8□□□□□ -1.13
VMA21-203ENST00000477649 PPP1R14CQ8TAE6 165 aa8□□□□□ -1.13
VMA21-203ENST00000477649 PPP4R1Q8TF05 950 aa8□□□□□ -1.13
VMA21-203ENST00000477649 STON2Q8WXE9 905 aa8□□□□□ -1.13
VMA21-203ENST00000477649 BADQ92934 168 aa8□□□□□ -1.13
VMA21-203ENST00000477649 CCDC126Q96EE4 140 aa8□□□□□ -1.13
VMA21-203ENST00000477649 LRRC37BQ96QE4 947 aa8□□□□□ -1.13
VMA21-203ENST00000477649 FEM1AQ9BSK4 669 aa8□□□□□ -1.13
VMA21-203ENST00000477649 HTATIP2Q9BUP3 242 aa8□□□□□ -1.13
VMA21-203ENST00000477649 RASSF4Q9H2L5 321 aa8□□□□□ -1.13
VMA21-203ENST00000477649 ATXN3LQ9H3M9 355 aa8□□□□□ -1.13
VMA21-203ENST00000477649 TASP1Q9H6P5 420 aa8□□□□□ -1.13
VMA21-203ENST00000477649 UGT1A7Q9HAW7 530 aa8□□□□□ -1.13
VMA21-203ENST00000477649 UGT1A10Q9HAW8 530 aa8□□□□□ -1.13
VMA21-203ENST00000477649 UGT1A8Q9HAW9 530 aa8□□□□□ -1.13
VMA21-203ENST00000477649 POPDC3Q9HBV1 291 aa8□□□□□ -1.13
VMA21-203ENST00000477649 ZNF334Q9HCZ1 680 aaPredicted RBP8□□□□□ -1.13
VMA21-203ENST00000477649 TLR9Q9NR96 1032 aa8□□□□□ -1.13
VMA21-203ENST00000477649 GKN1Q9NS71 199 aa8□□□□□ -1.13
VMA21-203ENST00000477649 PIH1D1Q9NWS0 290 aaKnown RBP8□□□□□ -1.13
VMA21-203ENST00000477649 ZDHHC7Q9NXF8 308 aa8□□□□□ -1.13
VMA21-203ENST00000477649 KCNK4Q9NYG8 393 aa8□□□□□ -1.13
VMA21-203ENST00000477649 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8□□□□□ -1.13
VMA21-203ENST00000477649 KIAA1522Q9P206 1035 aaPredicted RBP8□□□□□ -1.13
VMA21-203ENST00000477649 DNMT3BQ9UBC3 853 aaKnown RBP8□□□□□ -1.13
VMA21-203ENST00000477649 SORCS3Q9UPU3 1222 aa8□□□□□ -1.13
VMA21-203ENST00000477649 ACOT9Q9Y305 439 aa8□□□□□ -1.13
VMA21-203ENST00000477649 PSAT1Q9Y617 370 aa8□□□□□ -1.13
VMA21-203ENST00000477649 CPQQ9Y646 472 aa8□□□□□ -1.13
VMA21-203ENST00000477649 BRCA2P51587 3418 aa8□□□□□ -1.13
VMA21-203ENST00000477649 CENPFP49454 3210 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 DOCK4Q8N1I0 1966 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 A0A0D9SEW6 157 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 TMEM114B3SHH9 223 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 MYO1CO00159 1063 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 CBX4O00257 560 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 SLC9A3R1O14745 358 aaPredicted RBP7.99□□□□□ -1.13
VMA21-203ENST00000477649 TBL1XO60907 577 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 DNAJC6O75061 913 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 SOCS5O75159 536 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 SNNO75324 88 aaPredicted RBP7.99□□□□□ -1.13
VMA21-203ENST00000477649 RPP40O75818 363 aaKnown RBP7.99□□□□□ -1.13
VMA21-203ENST00000477649 ZMPSTE24O75844 475 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 DNAJC8O75937 253 aaPredicted RBP7.99□□□□□ -1.13
VMA21-203ENST00000477649 AHSGP02765 367 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 PROCP04070 461 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 C2P06681 752 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 IRF1P10914 325 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 MYL4P12829 197 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 CPA3P15088 417 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 WEE1P30291 646 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 CA8P35219 290 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 CLCN4P51793 760 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 RAB10P61026 200 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 MAXP61244 160 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 NAA20P61599 178 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 SULT2A1Q06520 285 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 ACTN3Q08043 901 aaPredicted RBP7.99□□□□□ -1.13
VMA21-203ENST00000477649 OLIG2Q13516 323 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 GRM3Q14832 879 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 CYTH1Q15438 398 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 PCSK7Q16549 785 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 N4BP2L1Q5TBK1 243 aaPredicted RBP7.99□□□□□ -1.13
VMA21-203ENST00000477649 PDE4DIPQ5VU43 2346 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 FAM91A1Q658Y4 838 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 TXNDC8Q6A555 127 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 KLC3Q6P597 504 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 CES3Q6UWW8 571 aa7.99□□□□□ -1.13
VMA21-203ENST00000477649 CDHR3Q6ZTQ4 885 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms