RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 DNAJC18Q9H819 358 aa18.7■□□□□ 0.58
VARS2-209ENST00000477288 CLUP10909 449 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 ADRA1DP25100 572 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 CBFBQ13951 182 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 GALNT3Q14435 633 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 TARBP2Q15633 366 aaKnown RBP18.69■□□□□ 0.58
VARS2-209ENST00000477288 PAGE2Q7Z2X7 111 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 CHST7Q9NS84 486 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 A0A0A0MRY4 1105 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 UBE2QL1A1L167 161 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 DNTTP04053 509 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 SLC35G4P0C7Q5 338 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 CCNYL3P0C7X3 344 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 TPP2P29144 1249 aaPredicted RBP18.69■□□□□ 0.58
VARS2-209ENST00000477288 PSEN1P49768 467 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 TBX2Q13207 712 aaPredicted RBP18.69■□□□□ 0.58
VARS2-209ENST00000477288 OLFML2AQ68BL7 652 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 CRTC3Q6UUV7 619 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 SPATA13Q96N96 652 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 PURBQ96QR8 312 aaKnown RBP18.69■□□□□ 0.58
VARS2-209ENST00000477288 SEMA3CQ99985 751 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 IDI2Q9BXS1 227 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 BRD9Q9H8M2 597 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 NT5C1B-RDH14C9J2C7 533 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 MAGEC1O60732 1142 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 TTPAP49638 278 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 MAP2K5Q13163 448 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 APTXQ7Z2E3 356 aaKnown RBP18.69■□□□□ 0.58
VARS2-209ENST00000477288 TMC3Q7Z5M5 1100 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 DNAJB14Q8TBM8 379 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 GMPPBQ9Y5P6 360 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 H3BQF6 201 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 GMFGO60234 142 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 ERAL1O75616 437 aaKnown RBP18.69■□□□□ 0.58
VARS2-209ENST00000477288 PIRTP0C851 137 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 GRIA3P42263 894 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 LGALS3BPQ08380 585 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 PUDPQ08623 228 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 LIN54Q6MZP7 749 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 RAD51AP1Q96B01 352 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 PRRG4Q9BZD6 226 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 ST3GAL5Q9UNP4 418 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 FAM153BP0C7A2 387 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 TIMM50Q3ZCQ8 353 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 FAM153CQ494X1 144 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 KATNAL2Q8IYT4 538 aa18.69■□□□□ 0.58
VARS2-209ENST00000477288 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.68■□□□□ 0.58
VARS2-209ENST00000477288 ZMPSTE24O75844 475 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 RPL38P63173 70 aaKnown RBP18.68■□□□□ 0.58
VARS2-209ENST00000477288 SMAD3P84022 425 aaKnown RBP18.68■□□□□ 0.58
VARS2-209ENST00000477288 EPS8Q12929 822 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 LYPLAL1Q5VWZ2 237 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 KYAT3Q6YP21 454 aaKnown RBP18.68■□□□□ 0.58
VARS2-209ENST00000477288 UTS2BQ765I0 119 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 ULK2Q8IYT8 1036 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 PARP8Q8N3A8 854 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 ATXN2LQ8WWM7 1075 aaKnown RBP18.68■□□□□ 0.58
VARS2-209ENST00000477288 BTBD3Q9Y2F9 522 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 EFR3BQ9Y2G0 817 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 GPC6Q9Y625 555 aaPredicted RBP18.68■□□□□ 0.58
VARS2-209ENST00000477288 ASTN2O75129 1339 aaPredicted RBP18.68■□□□□ 0.58
VARS2-209ENST00000477288 PPLO60437 1756 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 TBC1D3DA0A087WVF3 549 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 A0A087WXM4 84 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 TBC1D3IA0A087WXS9 549 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 TBC1D3EA0A087X179 549 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 TBC1D3KA0A087X1G2 549 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 ABHD14A-ACY1A0A1B0GW23 586 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 TBC1D3FA6NER0 549 aaPredicted RBP18.68■□□□□ 0.58
VARS2-209ENST00000477288 TBC1D3LB9A6J9 549 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 TAF4O00268 1085 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 TBC1D3HP0C7X1 549 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 TBC1D3GQ6DHY5 549 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 TBC1D3CQ6IPX1 549 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 FBXO42Q6P3S6 717 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 TBC1D3Q8IZP1 549 aaPredicted RBP18.68■□□□□ 0.58
VARS2-209ENST00000477288 NELL1Q92832 810 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 RBMXL2O75526 392 aaKnown RBP18.68■□□□□ 0.58
VARS2-209ENST00000477288 ZNF549Q6P9A3 640 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 RASAL3Q86YV0 1011 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 TRPV3Q8NET8 790 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 OR8D1Q8WZ84 308 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 SUCOQ9UBS9 1254 aaKnown RBP18.68■□□□□ 0.58
VARS2-209ENST00000477288 TMCO1Q9UM00 188 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 SLC27A6Q9Y2P4 619 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 FAM92AA1XBS5 289 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 SIGLEC16A6NMB1 481 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 GCATO75600 419 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 ALADP13716 330 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 ZNF248Q8NDW4 579 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 SPATA5L1Q9BVQ7 753 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 RPS6KA6Q9UK32 745 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 VPS4AQ9UN37 437 aa18.68■□□□□ 0.58
VARS2-209ENST00000477288 MAXP61244 160 aa18.67■□□□□ 0.58
VARS2-209ENST00000477288 SPIBQ01892 262 aa18.67■□□□□ 0.58
VARS2-209ENST00000477288 NEK5Q6P3R8 708 aa18.67■□□□□ 0.58
VARS2-209ENST00000477288 PGBD2Q6P3X8 592 aa18.67■□□□□ 0.58
VARS2-209ENST00000477288 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.67■□□□□ 0.58
VARS2-209ENST00000477288 TTLL2Q9BWV7 592 aa18.67■□□□□ 0.58
VARS2-209ENST00000477288 GULP1Q9UBP9 304 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms