RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 GPAT4Q86UL3 456 aa6.59□□□□□ -1.35
SMC5-203ENST00000475540 TMTC1Q8IUR5 882 aa6.59□□□□□ -1.35
SMC5-203ENST00000475540 DCP1BQ8IZD4 617 aaKnown RBP6.59□□□□□ -1.35
SMC5-203ENST00000475540 GJC3Q8NFK1 279 aa6.59□□□□□ -1.35
SMC5-203ENST00000475540 LMO3Q8TAP4 145 aa6.59□□□□□ -1.35
SMC5-203ENST00000475540 ZCCHC10Q8TBK6 192 aa6.59□□□□□ -1.35
SMC5-203ENST00000475540 HVCN1Q96D96 273 aa6.59□□□□□ -1.35
SMC5-203ENST00000475540 LRFN5Q96NI6 719 aa6.59□□□□□ -1.35
SMC5-203ENST00000475540 FIZ1Q96SL8 496 aa6.59□□□□□ -1.35
SMC5-203ENST00000475540 CYSLTR2Q9NS75 346 aa6.59□□□□□ -1.35
SMC5-203ENST00000475540 SNTG1Q9NSN8 517 aa6.59□□□□□ -1.35
SMC5-203ENST00000475540 KIAA1456Q9P272 454 aa6.59□□□□□ -1.35
SMC5-203ENST00000475540 BTBD18B2RXH4 712 aa6.58□□□□□ -1.36
SMC5-203ENST00000475540 TIMM23O14925 209 aa6.58□□□□□ -1.36
SMC5-203ENST00000475540 ZBTB11O95625 1053 aaPredicted RBP6.58□□□□□ -1.36
SMC5-203ENST00000475540 CH25HO95992 272 aa6.58□□□□□ -1.36
SMC5-203ENST00000475540 PEX5P50542 639 aa6.58□□□□□ -1.36
SMC5-203ENST00000475540 TUBA1BP68363 451 aa6.58□□□□□ -1.36
SMC5-203ENST00000475540 BNC1Q01954 994 aa6.58□□□□□ -1.36
SMC5-203ENST00000475540 KIF5AQ12840 1032 aa6.58□□□□□ -1.36
SMC5-203ENST00000475540 CAMK1Q14012 370 aa6.58□□□□□ -1.36
SMC5-203ENST00000475540 ESCO2Q56NI9 601 aa6.58□□□□□ -1.36
SMC5-203ENST00000475540 ZNF667Q5HYK9 610 aa6.58□□□□□ -1.36
SMC5-203ENST00000475540 WASF1Q92558 559 aa6.58□□□□□ -1.36
SMC5-203ENST00000475540 CARD8Q9Y2G2 431 aa6.58□□□□□ -1.36
SMC5-203ENST00000475540 PCDHGB1Q9Y5G3 927 aa6.58□□□□□ -1.36
SMC5-203ENST00000475540 CNTNAP2Q9UHC6 1331 aa6.57□□□□□ -1.36
SMC5-203ENST00000475540 A0A0U1RQJ8 604 aa6.57□□□□□ -1.36
SMC5-203ENST00000475540 RRN3P2A6NIE6 340 aa6.57□□□□□ -1.36
SMC5-203ENST00000475540 HSPB2A8KAH6 182 aa6.57□□□□□ -1.36
SMC5-203ENST00000475540 POU1F1P28069 291 aa6.57□□□□□ -1.36
SMC5-203ENST00000475540 FMO4P31512 558 aa6.57□□□□□ -1.36
SMC5-203ENST00000475540 RRP1P56182 461 aaKnown RBP6.57□□□□□ -1.36
SMC5-203ENST00000475540 RPP30P78346 268 aaKnown RBP6.57□□□□□ -1.36
SMC5-203ENST00000475540 SLC39A14Q15043 492 aa6.57□□□□□ -1.36
SMC5-203ENST00000475540 GPR68Q15743 365 aa6.57□□□□□ -1.36
SMC5-203ENST00000475540 HSPB2Q16082 182 aa6.57□□□□□ -1.36
SMC5-203ENST00000475540 CPLX2Q6PUV4 134 aaKnown RBP6.57□□□□□ -1.36
SMC5-203ENST00000475540 C18orf65Q6ZTR6 163 aa6.57□□□□□ -1.36
SMC5-203ENST00000475540 H1FNTQ75WM6 255 aaPredicted RBP6.57□□□□□ -1.36
SMC5-203ENST00000475540 PARP16Q8N5Y8 322 aa6.57□□□□□ -1.36
SMC5-203ENST00000475540 PLD5Q8N7P1 536 aa6.57□□□□□ -1.36
SMC5-203ENST00000475540 ARRDC2Q8TBH0 407 aa6.57□□□□□ -1.36
SMC5-203ENST00000475540 FUZQ9BT04 418 aa6.57□□□□□ -1.36
SMC5-203ENST00000475540 TTYH1Q9H313 450 aaPredicted RBP6.57□□□□□ -1.36
SMC5-203ENST00000475540 SMYD2Q9NRG4 433 aa6.57□□□□□ -1.36
SMC5-203ENST00000475540 GGA3Q9NZ52 723 aa6.57□□□□□ -1.36
SMC5-203ENST00000475540 TBX20Q9UMR3 447 aa6.57□□□□□ -1.36
SMC5-203ENST00000475540 A3GALT2U3KPV4 340 aa6.57□□□□□ -1.36
SMC5-203ENST00000475540 CCDC196A0A1B0GTZ2 297 aa6.56□□□□□ -1.36
SMC5-203ENST00000475540 J3KR12 359 aa6.56□□□□□ -1.36
SMC5-203ENST00000475540 NCAM2O15394 837 aa6.56□□□□□ -1.36
SMC5-203ENST00000475540 HOXC11O43248 304 aaPredicted RBP6.56□□□□□ -1.36
SMC5-203ENST00000475540 NDUFB4O95168 129 aa6.56□□□□□ -1.36
SMC5-203ENST00000475540 GALTP07902 379 aa6.56□□□□□ -1.36
SMC5-203ENST00000475540 CLDN2P57739 230 aa6.56□□□□□ -1.36
SMC5-203ENST00000475540 KIF19Q2TAC6 998 aa6.56□□□□□ -1.36
SMC5-203ENST00000475540 TMEM81Q6P7N7 255 aa6.56□□□□□ -1.36
SMC5-203ENST00000475540 PRSS57Q6UWY2 283 aa6.56□□□□□ -1.36
SMC5-203ENST00000475540 CCDC129Q6ZRS4 1044 aa6.56□□□□□ -1.36
SMC5-203ENST00000475540 RRM2BQ7LG56 351 aa6.56□□□□□ -1.36
SMC5-203ENST00000475540 SHFQ7M4L6 423 aa6.56□□□□□ -1.36
SMC5-203ENST00000475540 C16orf82Q7Z2V1 217 aa6.56□□□□□ -1.36
SMC5-203ENST00000475540 SNAPC3Q92966 411 aa6.56□□□□□ -1.36
SMC5-203ENST00000475540 APOPT1Q96IL0 206 aa6.56□□□□□ -1.36
SMC5-203ENST00000475540 SIN3AQ96ST3 1273 aa6.56□□□□□ -1.36
SMC5-203ENST00000475540 NUF2Q9BZD4 464 aa6.56□□□□□ -1.36
SMC5-203ENST00000475540 MYH16Q9H6N6 1097 aa6.56□□□□□ -1.36
SMC5-203ENST00000475540 PPP1R14DQ9NXH3 145 aa6.56□□□□□ -1.36
SMC5-203ENST00000475540 A0A0U1RQF3 1178 aa6.55□□□□□ -1.36
SMC5-203ENST00000475540 DENND3A2RUS2 1198 aa6.55□□□□□ -1.36
SMC5-203ENST00000475540 TSPAN4O14817 238 aa6.55□□□□□ -1.36
SMC5-203ENST00000475540 PYGLP06737 847 aa6.55□□□□□ -1.36
SMC5-203ENST00000475540 HNRNPA1P09651 372 aaKnown RBP eCLIP6.55□□□□□ -1.36
SMC5-203ENST00000475540 DAOP14920 347 aa6.55□□□□□ -1.36
SMC5-203ENST00000475540 XBP1P17861 261 aa6.55□□□□□ -1.36
SMC5-203ENST00000475540 TMEM95Q3KNT9 176 aa6.55□□□□□ -1.36
SMC5-203ENST00000475540 XKR9Q5GH70 373 aa6.55□□□□□ -1.36
SMC5-203ENST00000475540 SMRP1Q8NCR6 262 aa6.55□□□□□ -1.36
SMC5-203ENST00000475540 ZBTB10Q96DT7 871 aa6.55□□□□□ -1.36
SMC5-203ENST00000475540 DUX5Q96PT3 197 aa6.55□□□□□ -1.36
SMC5-203ENST00000475540 MXRA8Q9BRK3 442 aa6.55□□□□□ -1.36
SMC5-203ENST00000475540 IL25Q9H293 177 aa6.55□□□□□ -1.36
SMC5-203ENST00000475540 CTNNAL1Q9UBT7 734 aa6.55□□□□□ -1.36
SMC5-203ENST00000475540 SLC25A10Q9UBX3 287 aaPredicted RBP6.55□□□□□ -1.36
SMC5-203ENST00000475540 NFE2L3Q9Y4A8 694 aa6.55□□□□□ -1.36
SMC5-203ENST00000475540 LRRFIP2Q9Y608 721 aaKnown RBP6.55□□□□□ -1.36
SMC5-203ENST00000475540 NFS1Q9Y697 457 aa6.55□□□□□ -1.36
SMC5-203ENST00000475540 LOC102724159A0A0B4J2E5 919 aa6.54□□□□□ -1.36
SMC5-203ENST00000475540 TNPO2O14787 897 aaKnown RBP6.54□□□□□ -1.36
SMC5-203ENST00000475540 TACC1O75410 805 aa6.54□□□□□ -1.36
SMC5-203ENST00000475540 COX7A2P14406 83 aa6.54□□□□□ -1.36
SMC5-203ENST00000475540 PIGAP37287 484 aa6.54□□□□□ -1.36
SMC5-203ENST00000475540 UFM1P61960 85 aa6.54□□□□□ -1.36
SMC5-203ENST00000475540 NEDD9Q14511 834 aa6.54□□□□□ -1.36
SMC5-203ENST00000475540 PWP2Q15269 919 aaKnown RBP6.54□□□□□ -1.36
SMC5-203ENST00000475540 HIST2H2ACQ16777 129 aaPredicted RBP6.54□□□□□ -1.36
SMC5-203ENST00000475540 SPSB3Q6PJ21 355 aa6.54□□□□□ -1.36
SMC5-203ENST00000475540 ARMC9Q7Z3E5 817 aa6.54□□□□□ -1.36
SMC5-203ENST00000475540 MTBPQ96DY7 904 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms