RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 SPTBP11277 2137 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 NBASA2RRP1 2371 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 SPTY2D1-AS1A0A0U1RR47 76 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 A0A1W2PNU3 283 aaPredicted RBP5.99□□□□□ -1.45
CPSF7-210ENST00000474684 SIGLEC16A6NMB1 481 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 J3KR12 359 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 K7ESM1 405 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 DDX3XO00571 662 aaKnown RBP eCLIP5.99□□□□□ -1.451e-6■■■■□ 20.9
CPSF7-210ENST00000474684 MUSKO15146 869 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 BUB1O43683 1085 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 KDELR3O43731 214 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 AP1G1O43747 822 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 BRINP1O60477 761 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 MMP20O60882 483 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 DXOO77932 396 aaKnown RBP5.99□□□□□ -1.45
CPSF7-210ENST00000474684 FERP16591 822 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 CKMT2P17540 419 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 ACP1P24666 158 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 PSMA2P25787 234 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 HNF1BP35680 557 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 NUDT1P36639 197 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 ETFBP38117 255 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 PDX1P52945 283 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 TPI1P60174 286 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 PFN3P60673 137 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 RHOAP61586 193 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 RPS21P63220 83 aaKnown RBP5.99□□□□□ -1.45
CPSF7-210ENST00000474684 OVGP1Q12889 678 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 RALGDSQ12967 914 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 SERINC3Q13530 473 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 COL9A2Q14055 689 aaPredicted RBP5.99□□□□□ -1.45
CPSF7-210ENST00000474684 POLD3Q15054 466 aaPredicted RBP5.99□□□□□ -1.45
CPSF7-210ENST00000474684 IRF4Q15306 451 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 CYTH1Q15438 398 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 DEFB133Q30KQ1 61 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 ARL13BQ3SXY8 428 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 SOWAHCQ53LP3 525 aaPredicted RBP5.99□□□□□ -1.45
CPSF7-210ENST00000474684 ZNF805Q5CZA5 627 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 EFHC2Q5JST6 749 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 PERM1Q5SV97 790 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 NEK5Q6P3R8 708 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 GUSBP11Q6P575 273 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 SASS6Q6UVJ0 657 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 ZNF571Q7Z3V5 609 aaPredicted RBP5.99□□□□□ -1.45
CPSF7-210ENST00000474684 IRF2BP2Q7Z5L9 587 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 PARGQ86W56 976 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 TMPRSS12Q86WS5 348 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 ZNF354CQ86Y25 554 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 CPNE8Q86YQ8 564 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 SFTPA2Q8IWL1 248 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 ARHGAP12Q8IWW6 846 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 DCBLD1Q8N8Z6 715 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 TP53I13Q8NBR0 393 aaPredicted RBP5.99□□□□□ -1.45
CPSF7-210ENST00000474684 RFFLQ8WZ73 363 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 ISG20Q96AZ6 181 aaKnown RBP5.99□□□□□ -1.45
CPSF7-210ENST00000474684 LRIG1Q96JA1 1093 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 GDAP1L1Q96MZ0 367 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 GBP4Q96PP9 640 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 CNPY3Q9BT09 278 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 FUCA2Q9BTY2 467 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 C1QTNF2Q9BXJ5 285 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 MAGEH1Q9H213 219 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 LRRC19Q9H756 370 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 MBNL1Q9NR56 388 aaKnown RBP5.99□□□□□ -1.45
CPSF7-210ENST00000474684 AP4E1Q9UPM8 1137 aa5.99□□□□□ -1.45
CPSF7-210ENST00000474684 A0A087WV48 116 aa5.98□□□□□ -1.45
CPSF7-210ENST00000474684 TSPAN11A1L157 253 aa5.98□□□□□ -1.45
CPSF7-210ENST00000474684 WASH4PA8MWX3 477 aa5.98□□□□□ -1.45
CPSF7-210ENST00000474684 MAGEC1O60732 1142 aa5.98□□□□□ -1.45
CPSF7-210ENST00000474684 LRCH4O75427 683 aa5.98□□□□□ -1.45
CPSF7-210ENST00000474684 GCATO75600 419 aa5.98□□□□□ -1.45
CPSF7-210ENST00000474684 IGSF6O95976 241 aa5.98□□□□□ -1.45
CPSF7-210ENST00000474684 MBD3O95983 291 aa5.98□□□□□ -1.45
CPSF7-210ENST00000474684 CSF2P04141 144 aa5.98□□□□□ -1.45
CPSF7-210ENST00000474684 TPM2P07951 284 aa5.98□□□□□ -1.45
CPSF7-210ENST00000474684 CKMT1AP12532 417 aa5.98□□□□□ -1.45
CPSF7-210ENST00000474684 C6P13671 934 aa5.98□□□□□ -1.45
CPSF7-210ENST00000474684 JUPP14923 745 aa5.98□□□□□ -1.45
CPSF7-210ENST00000474684 TIMP2P16035 220 aa5.98□□□□□ -1.45
CPSF7-210ENST00000474684 GM2AP17900 193 aa5.98□□□□□ -1.45
CPSF7-210ENST00000474684 TGM2P21980 687 aa5.98□□□□□ -1.45
CPSF7-210ENST00000474684 IL1R2P27930 398 aa5.98□□□□□ -1.45
CPSF7-210ENST00000474684 MMP12P39900 470 aa5.98□□□□□ -1.45
CPSF7-210ENST00000474684 SNRPD1P62314 119 aaKnown RBP5.98□□□□□ -1.45
CPSF7-210ENST00000474684 SKOR1P84550 965 aa5.98□□□□□ -1.45
CPSF7-210ENST00000474684 SLC20A2Q08357 652 aa5.98□□□□□ -1.45
CPSF7-210ENST00000474684 ZNF211Q13398 564 aaPredicted RBP5.98□□□□□ -1.45
CPSF7-210ENST00000474684 MAMLD1Q13495 774 aa5.98□□□□□ -1.45
CPSF7-210ENST00000474684 C1orf61Q13536 156 aa5.98□□□□□ -1.45
CPSF7-210ENST00000474684 RTP5Q14D33 572 aa5.98□□□□□ -1.45
CPSF7-210ENST00000474684 ASIC2Q16515 512 aa5.98□□□□□ -1.45
CPSF7-210ENST00000474684 CDKN3Q16667 212 aa5.98□□□□□ -1.45
CPSF7-210ENST00000474684 SMTNL2Q2TAL5 461 aa5.98□□□□□ -1.45
CPSF7-210ENST00000474684 KLHL40Q2TBA0 621 aa5.98□□□□□ -1.45
CPSF7-210ENST00000474684 MYLK3Q32MK0 819 aa5.98□□□□□ -1.45
CPSF7-210ENST00000474684 ACBD5Q5T8D3 534 aaPredicted RBP5.98□□□□□ -1.45
CPSF7-210ENST00000474684 CDCP2Q5VXM1 449 aa5.98□□□□□ -1.45
CPSF7-210ENST00000474684 TXNRD3NBQ6F5E7 133 aa5.98□□□□□ -1.45
CPSF7-210ENST00000474684 PLEKHA7Q6IQ23 1121 aa5.98□□□□□ -1.45
CPSF7-210ENST00000474684 ACAD10Q6JQN1 1059 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms