RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 LKAAEAR1Q8TD35 194 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 PSPC1Q8WXF1 523 aaKnown RBP3.52□□□□□ -1.85
UBR3-208ENST00000474426 EDAQ92838 391 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 FAM120BQ96EK7 910 aaKnown RBP3.52□□□□□ -1.85
UBR3-208ENST00000474426 MCRS1Q96EZ8 462 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 CASD1Q96PB1 797 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 CITED2Q99967 270 aaPredicted RBP3.52□□□□□ -1.85
UBR3-208ENST00000474426 NAPBQ9H115 298 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 BLZF1Q9H2G9 400 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 NARFLQ9H6Q4 476 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 ASB8Q9H765 288 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 ATP13A2Q9NQ11 1180 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 DNAJC11Q9NVH1 559 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 SYBUQ9NX95 663 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 SELENONQ9NZV5 590 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 USP36Q9P275 1121 aaKnown RBP3.52□□□□□ -1.85
UBR3-208ENST00000474426 TLR6Q9Y2C9 796 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 MAN2B2Q9Y2E5 1009 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 KLHL20Q9Y2M5 609 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 OR2AG2A6NM03 316 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 GABRR3A8MPY1 467 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 DNM1LO00429 736 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 CNOT3O75175 753 aaKnown RBP3.52□□□□□ -1.85
UBR3-208ENST00000474426 CCNKO75909 580 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 KCNK5O95279 499 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 DLGAP3O95886 979 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 CD63P08962 238 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 OR1E1P30953 314 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 SLC1A3P43003 542 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 RAP1GDS1P52306 607 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 STAT2P52630 851 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 EIF3BP55884 814 aaKnown RBP3.52□□□□□ -1.85
UBR3-208ENST00000474426 AP1S2P56377 157 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 MRPS25P82663 173 aaKnown RBP3.52□□□□□ -1.85
UBR3-208ENST00000474426 PKP1Q13835 747 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 CAPSQ13938 189 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 VEZF1Q14119 521 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 HIKESHIQ53FT3 197 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.52□□□□□ -1.85
UBR3-208ENST00000474426 HGSNATQ68CP4 663 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 C18orf63Q68DL7 685 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 ACAD10Q6JQN1 1059 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 MFSD5Q6N075 450 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 C3orf33Q6P1S2 294 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 ADGRD1Q6QNK2 874 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 LAYNQ6UX15 382 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 VITQ6UXI7 678 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 ETV3LQ6ZN32 361 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 TRIM67Q6ZTA4 783 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.52□□□□□ -1.85
UBR3-208ENST00000474426 LHFPL4Q7Z7J7 247 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 SLC9A9Q8IVB4 645 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 DDIASQ8IXT1 998 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 CCDC105Q8IYK2 499 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 THEM5Q8N1Q8 247 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 TSPYL6Q8N831 410 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 STT3BQ8TCJ2 826 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 GAB3Q8WWW8 586 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 RAPGEF4Q8WZA2 1011 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 RSC1A1Q92681 617 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 NKD2Q969F2 451 aaPredicted RBP3.52□□□□□ -1.85
UBR3-208ENST00000474426 ISG20Q96AZ6 181 aaKnown RBP3.52□□□□□ -1.85
UBR3-208ENST00000474426 TMEM41AQ96HV5 264 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 C5orf34Q96MH7 638 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 INPP4AQ96PE3 977 aaPredicted RBP3.52□□□□□ -1.85
UBR3-208ENST00000474426 CSPG4P5Q96PW8 444 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 MIPEPQ99797 713 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 VRK1Q99986 396 aaPredicted RBP3.52□□□□□ -1.85
UBR3-208ENST00000474426 C17orf62Q9BQA9 187 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 DBNDD2Q9BQY9 259 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 PYM1Q9BRP8 204 aaKnown RBP3.52□□□□□ -1.85
UBR3-208ENST00000474426 TIPINQ9BVW5 301 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 RAB33BQ9H082 229 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 MMP27Q9H306 513 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 METTL7AQ9H8H3 244 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 FOLH1BQ9HBA9 442 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 SEPSECSQ9HD40 501 aaKnown RBP3.52□□□□□ -1.85
UBR3-208ENST00000474426 FBXO34Q9NWN3 711 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 COPG2Q9UBF2 871 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 CHIC2Q9UKJ5 165 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 RPH3ALQ9UNE2 315 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 DHRS7Q9Y394 339 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 MAD1L1Q9Y6D9 718 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 SPACA6W5XKT8 324 aa3.52□□□□□ -1.85
UBR3-208ENST00000474426 TAF1LQ8IZX4 1826 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 TRAV34A0A0B4J273 112 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 ESYT2A0FGR8 921 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 NFKBIEO00221 500 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 KIAA0355O15063 1070 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 FFAR2O15552 330 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 CDH16O75309 829 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 RPS6KA4O75676 772 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 RPP40O75818 363 aaKnown RBP3.51□□□□□ -1.85
UBR3-208ENST00000474426 CCNB2O95067 398 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 MMP2P08253 660 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 HNRNPA1P09651 372 aaKnown RBP eCLIP3.51□□□□□ -1.85
UBR3-208ENST00000474426 OR4E1P0C645 316 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 OR8G3PP0DMU2 310 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 ARAFP10398 606 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 CCDC130P13994 396 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms