RNA–Protein interactions for RNA: ENST00000474381.1

HLA-B-252, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,139 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-252ENST00000474381 DCP2Q8IU60 420 aaKnown RBP20.39■□□□□ 0.85
HLA-B-252ENST00000474381 TEX26Q8N6G2 289 aa20.39■□□□□ 0.85
HLA-B-252ENST00000474381 CALR3Q96L12 384 aaKnown RBP20.39■□□□□ 0.85
HLA-B-252ENST00000474381 TSGA13Q96PP4 275 aa20.39■□□□□ 0.85
HLA-B-252ENST00000474381 NUDCD1Q96RS6 583 aa20.39■□□□□ 0.85
HLA-B-252ENST00000474381 FZD3Q9NPG1 666 aa20.39■□□□□ 0.85
HLA-B-252ENST00000474381 AMACRQ9UHK6 382 aa20.39■□□□□ 0.85
HLA-B-252ENST00000474381 GGT7Q9UJ14 662 aa20.39■□□□□ 0.85
HLA-B-252ENST00000474381 PCDHB9Q9Y5E1 797 aa20.39■□□□□ 0.85
HLA-B-252ENST00000474381 ASCC3Q8N3C0 2202 aaKnown RBP20.39■□□□□ 0.85
HLA-B-252ENST00000474381 SOWAHDA6NJG2 315 aa20.38■□□□□ 0.85
HLA-B-252ENST00000474381 C3orf70A6NLC5 250 aaPredicted RBP20.38■□□□□ 0.85
HLA-B-252ENST00000474381 TRAFD1O14545 582 aaPredicted RBP20.38■□□□□ 0.85
HLA-B-252ENST00000474381 SOCS5O75159 536 aa20.38■□□□□ 0.85
HLA-B-252ENST00000474381 COMTP21964 271 aa20.38■□□□□ 0.85
HLA-B-252ENST00000474381 CCNCP24863 283 aa20.38■□□□□ 0.85
HLA-B-252ENST00000474381 PMLP29590 882 aa20.38■□□□□ 0.85
HLA-B-252ENST00000474381 TRIP6Q15654 476 aaKnown RBP20.38■□□□□ 0.85
HLA-B-252ENST00000474381 ERAP2Q6P179 960 aa20.38■□□□□ 0.85
HLA-B-252ENST00000474381 BAHD1Q8TBE0 780 aaPredicted RBP20.38■□□□□ 0.85
HLA-B-252ENST00000474381 CXorf40AQ8TE69 158 aa20.38■□□□□ 0.85
HLA-B-252ENST00000474381 SETD7Q8WTS6 366 aaKnown RBP20.38■□□□□ 0.85
HLA-B-252ENST00000474381 MAML1Q92585 1016 aa20.38■□□□□ 0.85
HLA-B-252ENST00000474381 CAMK1GQ96NX5 476 aa20.38■□□□□ 0.85
HLA-B-252ENST00000474381 KLF6Q99612 283 aaPredicted RBP20.38■□□□□ 0.85
HLA-B-252ENST00000474381 CDC6Q99741 560 aa20.38■□□□□ 0.85
HLA-B-252ENST00000474381 MYOCQ99972 504 aa20.38■□□□□ 0.85
HLA-B-252ENST00000474381 C1QTNF7Q9BXJ2 289 aa20.38■□□□□ 0.85
HLA-B-252ENST00000474381 GPR27Q9NS67 375 aa20.38■□□□□ 0.85
HLA-B-252ENST00000474381 HAUS2Q9NVX0 235 aa20.38■□□□□ 0.85
HLA-B-252ENST00000474381 CA5BQ9Y2D0 317 aa20.38■□□□□ 0.85
HLA-B-252ENST00000474381 ATP8A1Q9Y2Q0 1164 aa20.38■□□□□ 0.85
HLA-B-252ENST00000474381 FPGTO14772 594 aa20.37■□□□□ 0.85
HLA-B-252ENST00000474381 MATN3O15232 486 aa20.37■□□□□ 0.85
HLA-B-252ENST00000474381 PSTPIP1O43586 416 aa20.37■□□□□ 0.85
HLA-B-252ENST00000474381 TM7SF2O76062 418 aa20.37■□□□□ 0.85
HLA-B-252ENST00000474381 KRT1P04264 644 aa20.37■□□□□ 0.85
HLA-B-252ENST00000474381 ZFXP17010 805 aaPredicted RBP20.37■□□□□ 0.85
HLA-B-252ENST00000474381 EPHA8P29322 1005 aaPredicted RBP20.37■□□□□ 0.85
HLA-B-252ENST00000474381 MMP12P39900 470 aa20.37■□□□□ 0.85
HLA-B-252ENST00000474381 SIM1P81133 766 aaPredicted RBP20.37■□□□□ 0.85
HLA-B-252ENST00000474381 SHBQ15464 509 aa20.37■□□□□ 0.85
HLA-B-252ENST00000474381 ODF2Q5BJF6 829 aa20.37■□□□□ 0.85
HLA-B-252ENST00000474381 LRRC73Q5JTD7 316 aa20.37■□□□□ 0.85
HLA-B-252ENST00000474381 SLC9A4Q6AI14 798 aa20.37■□□□□ 0.85
HLA-B-252ENST00000474381 C11orf63Q6NUN7 778 aa20.37■□□□□ 0.85
HLA-B-252ENST00000474381 ZSWIM9Q86XI8 627 aa20.37■□□□□ 0.85
HLA-B-252ENST00000474381 PGBD5Q8N414 524 aa20.37■□□□□ 0.85
HLA-B-252ENST00000474381 OR13H1Q8NG92 308 aa20.37■□□□□ 0.85
HLA-B-252ENST00000474381 SAP25Q8TEE9 199 aa20.37■□□□□ 0.85
HLA-B-252ENST00000474381 HDAC11Q96DB2 347 aa20.37■□□□□ 0.85
HLA-B-252ENST00000474381 IFT43Q96FT9 208 aa20.37■□□□□ 0.85
HLA-B-252ENST00000474381 BMFQ96LC9 184 aa20.37■□□□□ 0.85
HLA-B-252ENST00000474381 ZNF830Q96NB3 372 aaPredicted RBP20.37■□□□□ 0.85
HLA-B-252ENST00000474381 PCDH12Q9NPG4 1184 aa20.37■□□□□ 0.85
HLA-B-252ENST00000474381 DTLQ9NZJ0 730 aa20.37■□□□□ 0.85
HLA-B-252ENST00000474381 ALG6Q9Y672 507 aa20.37■□□□□ 0.85
HLA-B-252ENST00000474381 CFAP69A5D8W1 941 aa20.36■□□□□ 0.85
HLA-B-252ENST00000474381 RIOK3O14730 519 aaKnown RBP20.36■□□□□ 0.85
HLA-B-252ENST00000474381 RAD51BO15315 384 aa20.36■□□□□ 0.85
HLA-B-252ENST00000474381 HTRA2O43464 458 aaPredicted RBP20.36■□□□□ 0.85
HLA-B-252ENST00000474381 MMP20O60882 483 aa20.36■□□□□ 0.85
HLA-B-252ENST00000474381 RABIFP47224 123 aa20.36■□□□□ 0.85
HLA-B-252ENST00000474381 CLDN2P57739 230 aa20.36■□□□□ 0.85
HLA-B-252ENST00000474381 GBE1Q04446 702 aa20.36■□□□□ 0.85
HLA-B-252ENST00000474381 PRAMEF14Q5SWL7 426 aa20.36■□□□□ 0.85
HLA-B-252ENST00000474381 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.36■□□□□ 0.85
HLA-B-252ENST00000474381 RHBDD1Q8TEB9 315 aa20.36■□□□□ 0.85
HLA-B-252ENST00000474381 CENPTQ96BT3 561 aa20.36■□□□□ 0.85
HLA-B-252ENST00000474381 BAG1Q99933 345 aaPredicted RBP20.36■□□□□ 0.85
HLA-B-252ENST00000474381 SCUBE2Q9NQ36 999 aa20.36■□□□□ 0.85
HLA-B-252ENST00000474381 SPAARA0A1B0GVQ0 90 aa20.35■□□□□ 0.85
HLA-B-252ENST00000474381 POM121BA6NF01 834 aa20.35■□□□□ 0.85
HLA-B-252ENST00000474381 BTNL10A8MVZ5 291 aa20.35■□□□□ 0.85
HLA-B-252ENST00000474381 TOR1BO14657 336 aa20.35■□□□□ 0.85
HLA-B-252ENST00000474381 TRIM16O95361 564 aa20.35■□□□□ 0.85
HLA-B-252ENST00000474381 ITGAVP06756 1048 aa20.35■□□□□ 0.85
HLA-B-252ENST00000474381 ITIH2P19823 946 aa20.35■□□□□ 0.85
HLA-B-252ENST00000474381 CES1P23141 567 aa20.35■□□□□ 0.85
HLA-B-252ENST00000474381 FAM193AP78312 1265 aa20.35■□□□□ 0.85
HLA-B-252ENST00000474381 SHC2P98077 582 aa20.35■□□□□ 0.85
HLA-B-252ENST00000474381 IL9RQ01113 521 aa20.35■□□□□ 0.85
HLA-B-252ENST00000474381 AGERQ15109 404 aa20.35■□□□□ 0.85
HLA-B-252ENST00000474381 ALG1LQ6GMV1 187 aa20.35■□□□□ 0.85
HLA-B-252ENST00000474381 Q6ZSR6 202 aa20.35■□□□□ 0.85
HLA-B-252ENST00000474381 PTAR1Q7Z6K3 402 aaPredicted RBP20.35■□□□□ 0.85
HLA-B-252ENST00000474381 PAF1Q8N7H5 531 aa20.35■□□□□ 0.85
HLA-B-252ENST00000474381 PLD5Q8N7P1 536 aa20.35■□□□□ 0.85
HLA-B-252ENST00000474381 NSMCE3Q96MG7 304 aa20.35■□□□□ 0.85
HLA-B-252ENST00000474381 WRAP53Q9BUR4 548 aaKnown RBP20.35■□□□□ 0.85
HLA-B-252ENST00000474381 MAK16Q9BXY0 300 aaKnown RBP20.35■□□□□ 0.85
HLA-B-252ENST00000474381 POLR1EQ9GZS1 481 aaKnown RBP20.35■□□□□ 0.85
HLA-B-252ENST00000474381 NOD2Q9HC29 1040 aa20.35■□□□□ 0.85
HLA-B-252ENST00000474381 HYOU1Q9Y4L1 999 aa20.35■□□□□ 0.85
HLA-B-252ENST00000474381 CNOT1A5YKK6 2376 aaKnown RBP20.35■□□□□ 0.85
HLA-B-252ENST00000474381 APOL1O14791 398 aa20.34■□□□□ 0.85
HLA-B-252ENST00000474381 NFKBIAP25963 317 aa20.34■□□□□ 0.85
HLA-B-252ENST00000474381 PFN3P60673 137 aa20.34■□□□□ 0.85
HLA-B-252ENST00000474381 SLC10A2Q12908 348 aaPredicted RBP20.34■□□□□ 0.85
HLA-B-252ENST00000474381 TAZQ16635 292 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms