RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 SARM1Q6SZW1 724 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 UNQ6494/PRO21346Q6UXR6 183 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 KYAT3Q6YP21 454 aaKnown RBP11.29□□□□□ -0.6
CKS1B-206ENST00000474215 PTAR1Q7Z6K3 402 aaPredicted RBP11.29□□□□□ -0.6
CKS1B-206ENST00000474215 LRRC49Q8IUZ0 686 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 CNGA4Q8IV77 575 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 MAP7D3Q8IWC1 876 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 SLC22A18ASQ8N1D0 253 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 SLC25A45Q8N413 288 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 KCTD6Q8NC69 237 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 DENND6BQ8NEG7 585 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 SLC35G2Q8TBE7 412 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 CXorf40AQ8TE69 158 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 GATA6Q92908 595 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 CNDP2Q96KP4 475 aaKnown RBP11.29□□□□□ -0.6
CKS1B-206ENST00000474215 WRAP53Q9BUR4 548 aaKnown RBP11.29□□□□□ -0.6
CKS1B-206ENST00000474215 C1QTNF7Q9BXJ2 289 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 TRIM5Q9C035 493 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 PCDH12Q9NPG4 1184 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 GPR27Q9NS67 375 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 SPTLC3Q9NUV7 552 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 TMEM131Q92545 1883 aa11.29□□□□□ -0.6
CKS1B-206ENST00000474215 ENC1O14682 589 aa11.28□□□□□ -0.6
CKS1B-206ENST00000474215 RIOK3O14730 519 aaKnown RBP11.28□□□□□ -0.6
CKS1B-206ENST00000474215 SDC3O75056 442 aa11.28□□□□□ -0.6
CKS1B-206ENST00000474215 KRT7P08729 469 aa11.28□□□□□ -0.6
CKS1B-206ENST00000474215 DGKAP23743 735 aa11.28□□□□□ -0.6
CKS1B-206ENST00000474215 MAN1A1P33908 653 aa11.28□□□□□ -0.6
CKS1B-206ENST00000474215 HSPA9P38646 679 aaKnown RBP11.28□□□□□ -0.6
CKS1B-206ENST00000474215 TAS2R40P59535 323 aa11.28□□□□□ -0.6
CKS1B-206ENST00000474215 PFN3P60673 137 aa11.28□□□□□ -0.6
CKS1B-206ENST00000474215 AP1S1P61966 158 aa11.28□□□□□ -0.6
CKS1B-206ENST00000474215 POLR2LP62875 67 aaKnown RBP11.28□□□□□ -0.6
CKS1B-206ENST00000474215 DPYSL3Q14195 570 aa11.28□□□□□ -0.6
CKS1B-206ENST00000474215 FZD2Q14332 565 aa11.28□□□□□ -0.6
CKS1B-206ENST00000474215 ST3GAL2Q16842 350 aa11.28□□□□□ -0.6
CKS1B-206ENST00000474215 CCDC157Q569K6 752 aa11.28□□□□□ -0.6
CKS1B-206ENST00000474215 ZSWIM9Q86XI8 627 aa11.28□□□□□ -0.6
CKS1B-206ENST00000474215 CPNE8Q86YQ8 564 aa11.28□□□□□ -0.6
CKS1B-206ENST00000474215 ATPAF2Q8N5M1 289 aa11.28□□□□□ -0.6
CKS1B-206ENST00000474215 NSMCE1Q8WV22 266 aa11.28□□□□□ -0.6
CKS1B-206ENST00000474215 ECHDC3Q96DC8 303 aa11.28□□□□□ -0.6
CKS1B-206ENST00000474215 TMEM121BQ9BXQ6 578 aaPredicted RBP11.28□□□□□ -0.6
CKS1B-206ENST00000474215 UCKL1Q9NWZ5 548 aa11.28□□□□□ -0.6
CKS1B-206ENST00000474215 DNAJC28Q9NX36 388 aa11.28□□□□□ -0.6
CKS1B-206ENST00000474215 CABIN1Q9Y6J0 2220 aa11.27□□□□□ -0.61
CKS1B-206ENST00000474215 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.27□□□□□ -0.61
CKS1B-206ENST00000474215 TMEM110-MUSTN1A8MSY1 372 aa11.27□□□□□ -0.61
CKS1B-206ENST00000474215 TRAFD1O14545 582 aaPredicted RBP11.27□□□□□ -0.61
CKS1B-206ENST00000474215 TOR1BO14657 336 aa11.27□□□□□ -0.61
CKS1B-206ENST00000474215 PIAS2O75928 621 aa11.27□□□□□ -0.61
CKS1B-206ENST00000474215 CSF2P04141 144 aa11.27□□□□□ -0.61
CKS1B-206ENST00000474215 C1SP09871 688 aa11.27□□□□□ -0.61
CKS1B-206ENST00000474215 CDK4P11802 303 aa11.27□□□□□ -0.61
CKS1B-206ENST00000474215 GJC1P36383 396 aa11.27□□□□□ -0.61
CKS1B-206ENST00000474215 ARHGAP25P42331 645 aa11.27□□□□□ -0.61
CKS1B-206ENST00000474215 LIG3P49916 1009 aa11.27□□□□□ -0.61
CKS1B-206ENST00000474215 THOP1P52888 689 aa11.27□□□□□ -0.61
CKS1B-206ENST00000474215 HNRNPKP61978 463 aaKnown RBP eCLIP11.27□□□□□ -0.61
CKS1B-206ENST00000474215 YPEL5P62699 121 aa11.27□□□□□ -0.61
CKS1B-206ENST00000474215 DNAJC3Q13217 504 aa11.27□□□□□ -0.61
CKS1B-206ENST00000474215 ZNF211Q13398 564 aaPredicted RBP11.27□□□□□ -0.61
CKS1B-206ENST00000474215 PDE1CQ14123 709 aaPredicted RBP11.27□□□□□ -0.61
CKS1B-206ENST00000474215 PTK2BQ14289 1009 aa11.27□□□□□ -0.61
CKS1B-206ENST00000474215 ZNF235Q14590 738 aa11.27□□□□□ -0.61
CKS1B-206ENST00000474215 MESDQ14696 234 aa11.27□□□□□ -0.61
CKS1B-206ENST00000474215 LRRC14Q15048 493 aa11.27□□□□□ -0.61
CKS1B-206ENST00000474215 PAFAH1B3Q15102 231 aaKnown RBP11.27□□□□□ -0.61
CKS1B-206ENST00000474215 ANKRD20A8PQ5CZ79 823 aa11.27□□□□□ -0.61
CKS1B-206ENST00000474215 ZNF542PQ5EBM4 170 aa11.27□□□□□ -0.61
CKS1B-206ENST00000474215 MARC1Q5VT66 337 aa11.27□□□□□ -0.61
CKS1B-206ENST00000474215 CCNI2Q6ZMN8 369 aaPredicted RBP11.27□□□□□ -0.61
CKS1B-206ENST00000474215 TMPRSS7Q7RTY8 843 aa11.27□□□□□ -0.61
CKS1B-206ENST00000474215 PARGQ86W56 976 aa11.27□□□□□ -0.61
CKS1B-206ENST00000474215 BBS5Q8N3I7 341 aa11.27□□□□□ -0.61
CKS1B-206ENST00000474215 GALNT15Q8N3T1 639 aa11.27□□□□□ -0.61
CKS1B-206ENST00000474215 PGBD5Q8N414 524 aa11.27□□□□□ -0.61
CKS1B-206ENST00000474215 PAF1Q8N7H5 531 aa11.27□□□□□ -0.61
CKS1B-206ENST00000474215 KDF1Q8NAX2 398 aaPredicted RBP11.27□□□□□ -0.61
CKS1B-206ENST00000474215 TP53I13Q8NBR0 393 aaPredicted RBP11.27□□□□□ -0.61
CKS1B-206ENST00000474215 PCDH19Q8TAB3 1148 aa11.27□□□□□ -0.61
CKS1B-206ENST00000474215 NSMCE3Q96MG7 304 aa11.27□□□□□ -0.61
CKS1B-206ENST00000474215 NUDCD1Q96RS6 583 aa11.27□□□□□ -0.61
CKS1B-206ENST00000474215 ZNF670Q9BS34 389 aa11.27□□□□□ -0.61
CKS1B-206ENST00000474215 MBNL1Q9NR56 388 aaKnown RBP11.27□□□□□ -0.61
CKS1B-206ENST00000474215 ATP8A1Q9Y2Q0 1164 aa11.27□□□□□ -0.61
CKS1B-206ENST00000474215 PCDHGA1Q9Y5H4 931 aa11.27□□□□□ -0.61
CKS1B-206ENST00000474215 DOCK9Q9BZ29 2069 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 TPRP12270 2363 aaKnown RBP11.26□□□□□ -0.61
CKS1B-206ENST00000474215 A0A1W2PQ67 120 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 TTC24A2A3L6 582 aaPredicted RBP11.26□□□□□ -0.61
CKS1B-206ENST00000474215 CFAP69A5D8W1 941 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 TMEM8BA6NDV4 472 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 NEMP2A6NFY4 417 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 TRIM38O00635 465 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 SCAMP1O15126 338 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 SIGLEC6O43699 453 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 LZTS3O60299 673 aaPredicted RBP11.26□□□□□ -0.61
CKS1B-206ENST00000474215 MTA2O94776 668 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 PRKCGP05129 697 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms