RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 NDRG4Q9ULP0 352 aaKnown RBP2.52□□□□□ -2.01
CALD1-216ENST00000473714 CAPN11Q9UMQ6 739 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 CNTN6Q9UQ52 1028 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 ATG2BQ96BY7 2078 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 MYH7BA7E2Y1 1941 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 DLG5Q8TDM6 1919 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 MYH2Q9UKX2 1941 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 MED13LQ71F56 2210 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 NID2Q14112 1375 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 MROH7-TTC4A0A0A0MT08 1334 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 SCN10AQ9Y5Y9 1956 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 TRGV11A0A075B6L2 103 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 B4DLN1 442 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 TISP43B9A030 160 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 ZNF213O14771 459 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 PCDH17O14917 1159 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 SPTLC2O15270 562 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 CD3EAPO15446 510 aaKnown RBP2.51□□□□□ -2.01
CALD1-216ENST00000473714 RPP40O75818 363 aaKnown RBP2.51□□□□□ -2.01
CALD1-216ENST00000473714 SCAF4O95104 1147 aaKnown RBP2.51□□□□□ -2.01
CALD1-216ENST00000473714 DDX58O95786 925 aaKnown RBP2.51□□□□□ -2.01
CALD1-216ENST00000473714 SLC3A2P08195 630 aaKnown RBP2.51□□□□□ -2.01
CALD1-216ENST00000473714 LINC00271P0C7V0 271 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 TMEM225BP0DP42 221 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 HOXB8P17481 243 aaPredicted RBP2.51□□□□□ -2.01
CALD1-216ENST00000473714 EIF2S2P20042 333 aaKnown RBP2.51□□□□□ -2.01
CALD1-216ENST00000473714 CAPN3P20807 821 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 FGFR4P22455 802 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 GCSHP23434 173 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 CHMP24386 653 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 PPIFP30405 207 aaKnown RBP2.51□□□□□ -2.01
CALD1-216ENST00000473714 ADSSP30520 456 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 UQCRC1P31930 480 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 APOBEC3AP31941 199 aaPredicted RBP2.51□□□□□ -2.01
CALD1-216ENST00000473714 GRK5P34947 590 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 CTNNB1P35222 781 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 THBS4P35443 961 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 ARL3P36405 182 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 ZEB1P37275 1124 aaPredicted RBP2.51□□□□□ -2.01
CALD1-216ENST00000473714 POLD2P49005 469 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 ANXA11P50995 505 aaKnown RBP2.51□□□□□ -2.01
CALD1-216ENST00000473714 SCNN1GP51170 649 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 STARD6P59095 220 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 ADAM8P78325 824 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 BEX3Q00994 111 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 SLFN5Q08AF3 891 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 MPP3Q13368 585 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 DYRK1AQ13627 763 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 KCNC3Q14003 757 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 TOB2Q14106 344 aaPredicted RBP2.51□□□□□ -2.01
CALD1-216ENST00000473714 GALNTL6Q49A17 601 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 RUNDC3AQ59EK9 446 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 TMEM196Q5HYL7 178 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 FAM69AQ5T7M9 428 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 HECTD2Q5U5R9 776 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 SPATA1Q5VX52 437 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 HIST2H2BCQ6DN03 193 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 ABLIM2Q6H8Q1 611 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 CDC42EP5Q6NZY7 148 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 SLC22A25Q6T423 547 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 KLHL24Q6TFL4 600 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 CXCL17Q6UXB2 119 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.51□□□□□ -2.01
CALD1-216ENST00000473714 Q6ZRM9 215 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 LRRC8DQ7L1W4 858 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 R3HCC1LQ7Z5L2 792 aaKnown RBP2.51□□□□□ -2.01
CALD1-216ENST00000473714 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.51□□□□□ -2.01
CALD1-216ENST00000473714 RBM23Q86U06 439 aaKnown RBP2.51□□□□□ -2.01
CALD1-216ENST00000473714 MAPKAPK5Q8IW41 473 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 RHOT2Q8IXI1 618 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 IZUMO1Q8IYV9 350 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 TMTC2Q8N394 836 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 C9orf106Q8NAJ2 232 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 SIMC1Q8NDZ2 872 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 MDGA1Q8NFP4 955 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 VN1R2Q8NFZ6 395 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 OR52N2Q8NGI0 321 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 MBD3L2Q8NHZ7 208 aaPredicted RBP2.51□□□□□ -2.01
CALD1-216ENST00000473714 POC1BQ8TC44 478 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 PROKR1Q8TCW9 393 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 SCARB1Q8WTV0 552 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 XAGE5Q8WWM1 108 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 RFFLQ8WZ73 363 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 FAM136AQ96C01 138 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 ERP27Q96DN0 273 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 APOPT1Q96IL0 206 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 FAR2Q96K12 515 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 C7orf26Q96N11 449 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 KLHL5Q96PQ7 755 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 PIGSQ96S52 555 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 DCLRE1CQ96SD1 692 aaKnown RBP2.51□□□□□ -2.01
CALD1-216ENST00000473714 REEP2Q9BRK0 252 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 CHCHD6Q9BRQ6 235 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 ACTRT3Q9BYD9 372 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 CCDC68Q9H2F9 335 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 RMI1Q9H9A7 625 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 CYP4F11Q9HBI6 524 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 GLOD4Q9HC38 313 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 PRMT8Q9NR22 394 aaPredicted RBP2.51□□□□□ -2.01
CALD1-216ENST00000473714 DIAPH3Q9NSV4 1193 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms